Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4377 ATGACAATGGCTGCCCCAGGGCATCTCAACGTCACTGAATCTCCTTCCCGTGGATCCCGCAGCGTTGATTGCTTCGAGAAATTGGAGCAAATCGGCGAAGGAACCTATGGTCAGGTTTACATGGCCCGAGAGATCGAAACCGGTGAAATTGTCGCCCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAACGTAATCAAGTTGAAGGAAATCGTCACATCTCCAGGTCCTGAGAAAGATGATCAAGGGAGGCCAGATGGCAACAAATACAAAGGGGGCATATATATGGTCTTCGAATACATGGACCATGATTTAACAGGTCTTGCAGACCGGCCTGGCATGAGATTTACTGTCCCCCAAATTAAGTGTTACATGAGGCAGCTTTTGACAGGACTTCACTATTGTCATGTCAATCAAGTTCTTCATCGTGATATCAAAGGTTCAAATCTTCTCATAGATAATGAAGGTAATCTGAAGCTGGCAGATTTTGGATTGGCTCGGTCATTTTCGAATGAGCACAATGCAAACCTTACAAATCGAGTCATCACATTATGGTACAGACCCCCTGAGTTACTACTGGGGACAACAAGGTACGGGCCAGCTGTGGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCACGGGAAGCCCATCTTTCCTGGAAAAGACGAGCCAGAGCAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCGGATGAGACGAACTGGCCTGGAGTTACTAAGACTCCTTGGTACAATCAGTTTAAGCCAACAAGACCGATGAAAAGGCGCCTGAGGGAAGTTTTCAGACATTTTGATCGCCATGCATTGGAGTTGTTGGAGAAGATGCTCACACTTGATCCAGCTCAGAGAATTCCTGCCAAGGACGCACTTGATGCCGAGTATTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGTCAGCAGCAACGGCTGAATGAAGAAAATGCCAAACGTCTTAAAATGCAGCATCCACAGCAGCATACCCGTCTTCCGCCGATTCAGCAGGGTGGACAACATGCCCAAATGCGGCAAGGTCCTTCCCACCCTGTTCATGGTTCTCAACCAGCAGTTGCTGCCGGACCTAGCCATCATTATGGTAAGCCTCGAGGGCCTTCTGGTGGGCCAGGAAGATATCCTCCTGGTGGGAACCCTAGTGGGGGATACAATCATCCAAATCGTGGAGGTCAAGGAGGGGGTGCTGGTTATGGCAGTGGACCATATCCTCCTCAAGGGCGAGGAGCACCTTATGGGTCTAGTGGTATGCCTGCAGGACCCGGCGGCGGTGGTCCTCGTGGTGGAGGTGGCAGTGGCTATGGAGTTGGAGCTCCAAATTATCCTCAAGGTGGTCCTCCATATGGTGGGTCGGCTGGTGGTCGAGGGTCAAACATGATGGGTGGGAATCGCAATCAACAGTATGGTTGGCAGCAGTAG 1566 0.486 MTMAAPGHLNVTESPSRGSRSVDCFEKLEQIGEGTYGQVYMAREIETGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDETNWPGVTKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRIPAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRLNEENAKRLKMQHPQQHTRLPPIQQGGQHAQMRQGPSHPVHGSQPAVAAGPSHHYGKPRGPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSSGMPAGPGGGGPRGGGGSGYGVGAPNYPQGGPPYGGSAGGRGSNMMGGNRNQQYGWQQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4377 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Tpr3g4377 521 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Tpr3g4377 521 MobiDBLite consensus disorder prediction 378 417 - -
Tpr3g4377 521 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Tpr3g4377 521 MobiDBLite consensus disorder prediction 507 521 - -
Tpr3g4377 521 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g4377 521 Coils Coil 342 362 - -
Tpr3g4377 521 CDD STKc_CDK9_like 25 324 - -
Tpr3g4377 521 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Tpr3g4377 521 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4377 521 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Tpr3g4377 521 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 453 - -
Tpr3g4377 521 MobiDBLite consensus disorder prediction 448 521 - -
Tpr3g4377 521 PANTHER CELL DIVISION PROTEIN KINASE 5 453 - -
Tpr3g4377 521 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4377 521 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4377 Tpr-Chr3 48711003 48716148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4377 1 521 Core Cell Cycle Gene Families AT5G10270 77.419 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr3g4377 Pkinase 4.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4377 K08819 - gmx:100793565 860.522