Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4366 ATGTTATTCCCATTTGGTGGTCCAGATATACTAAACACCATATCATGTTACGGTTACATATTCTTCTTATTTCTAAATGCTGTTAAAATGGACTTGACCTTAATAACAAAAACAGGCAAAAAAGCTTGGGTAATTGCACTTCTATCATTTATCGGAACCTCCGTAATTAGCATTATCTTCTTTGTTTTTACCCACAATATTTGGTTAAGTCTAATTGGCGAGGAAGAAACATTTGGTTTACCCCTTGTCTTTATGGCTCATAGCGGTTGTTCTTTCGCGGTCATTGCTTCTTTCCTAAGTGACCTTGGAATCCTCAACTCCGAACTTGGCCGCCTTGCATTGTCATCGGCTTTCCTGATCGACATCTCAAAAAATGTCTTGGCAGGTATAGGAACCGCCATTGTGGGTGCCATTGAGGGAGGATTGTTAATGGCTGTTAAAAACTTATTTCAATTCTTTTTTTTCCTCGTGGGGATTCCGTTAATCGGGCGACCAATAATGATGTTGATGGTGAAAAACACACCAGAAGGAAAACCAATTAACAAGATATACATACACTTCATTGTGTTTGCATTATTCATGTTAGGTATATTAGCTGGAAAATTCAACCAACCTTTTTTTGCAGGTGCCATTGTATTAGGCCTTGCAGTTCCTGAAGGACCACCATTAGGGTCAGAGTTGGTTAATCAATTTGACTTGTTCTCTACATGGATTCTCACACCCATTTTTGTGACTTGTTGTGTGATGAAAGTGAATCTAACTATGTGTGGACCTCCTATCCTTATTGTTGTTATCTTTGGATTCATCATTTTGGTGCATACTATTAAGCTATTTCAGTGTTTCATTGTTTGCAAATATTGCAATATGCCTTCAAGTGATGGTCTTTGTCTTGCTCTCATTTTGAGTTGCAAAGGTGTCATTGATACTTGCTCCTTCGTTCTTATCTACGACGGAATCAGACGATCTCAAAAAGCAATAGGTGCTATGGTAATATCAACCTTAATCTTGGCAACAATCTCAAGAGTAGGAGTGAAATTATTATACGACCCATCGAGAAAATATGCAGGGTATCAAAAGAGAAACATAATGAATCTGAAACAAAACACCGAGCTTCGGTTAGTTGCAGTTGTACACAGAGCAATTCACATGGTTCACATTAAGGATTTCTTAAACCTTTGTTCTCCCGCGCCAGACAATGCACTCGTTGCAGACGTGTTATATTTGATGGAATTAATTGGAAGAACAACACCCATTTTCATATCACATCGTCTCCAGCAAAGAAAACGATCCACACAAAACTACTCGATAGAGTTAGTTGTTACATTTGACCTTTTCGAGCGTGACCATGCTGGTTCAGCAACAGCTAACACATACACATCAATATCACCGACAACATCTATGCCCGAAGATGTTTGTTACCTTGCATTAGATAAAAATGCAGCTATTATAATTCTACCATTCCACATAAGATGGTTAAAAAATGGTTCAATTGAATCAGAAGACAACAGTGTAAGATCATTGAATTTAAAGGTTTTGGAAAGAGCACCTTGTTCAGTTGGGATTTTGGTTGACCGTGGTTCGACAACCAACATTTCACAAGTTTATAAAGTAGCTATGATTTTCCTCGGTGGGCCGGATGATAGAGAAGCTTTCTGTTTAGCTAAAAGGTTTTCTAAAAATTTGGACAACACTTTGTTTGTTTATAGATTGCTTTCTTGTGAACACAATTCAACGGGTTGGGAGGAAATGATCGATGATGAGGAGTTAAGGGAAGTGCGCGGAGCTTATGTTAGACATGAAAATGTCAAGTATGAACAAAAAACTATAGAGGATGCATCTCAAACAACTAGTTTTATAAAGGAAATAGCCAATAAATTTGATTTTATTATAGTTGGGAGACGTAATGGACTTAAATCTCCGCAAACTTTTGGTTTAGAAAATTGGACTGAATATCCTGAATTAGGCGTAATTGGTGATTTGCTAGCTTCGCGAGATATGGAATGTAAAGCTTCAATTTTAGTTGTGCAACAACAACAACAAGTAAACAAGTCCATTACCTCTAAATGA 2067 0.3749 MLFPFGGPDILNTISCYGYIFFLFLNAVKMDLTLITKTGKKAWVIALLSFIGTSVISIIFFVFTHNIWLSLIGEEETFGLPLVFMAHSGCSFAVIASFLSDLGILNSELGRLALSSAFLIDISKNVLAGIGTAIVGAIEGGLLMAVKNLFQFFFFLVGIPLIGRPIMMLMVKNTPEGKPINKIYIHFIVFALFMLGILAGKFNQPFFAGAIVLGLAVPEGPPLGSELVNQFDLFSTWILTPIFVTCCVMKVNLTMCGPPILIVVIFGFIILVHTIKLFQCFIVCKYCNMPSSDGLCLALILSCKGVIDTCSFVLIYDGIRRSQKAIGAMVISTLILATISRVGVKLLYDPSRKYAGYQKRNIMNLKQNTELRLVAVVHRAIHMVHIKDFLNLCSPAPDNALVADVLYLMELIGRTTPIFISHRLQQRKRSTQNYSIELVVTFDLFERDHAGSATANTYTSISPTTSMPEDVCYLALDKNAAIIILPFHIRWLKNGSIESEDNSVRSLNLKVLERAPCSVGILVDRGSTTNISQVYKVAMIFLGGPDDREAFCLAKRFSKNLDNTLFVYRLLSCEHNSTGWEEMIDDEELREVRGAYVRHENVKYEQKTIEDASQTTSFIKEIANKFDFIIVGRRNGLKSPQTFGLENWTEYPELGVIGDLLASRDMECKASILVVQQQQQVNKSITSK* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4366 688 Gene3D - 2 354 IPR038770 -
Tpr3g4366 688 PANTHER CATION/H + ANTIPORTER 1 681 - -
Tpr3g4366 688 PANTHER CATION/H+ EXCHANGER 2 1 681 - -
Tpr3g4366 688 Pfam Sodium/hydrogen exchanger family 8 339 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4366 Tpr-Chr3 48650958 48653195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4366 13 679 Antiporter Super Family AT5G22900 36.769 3.00e-137 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4366 - - aprc:113854112 914.064