Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4355 ATGGGTTGGAGATGTAGCTGTGTTGTCGTTGTCTTAGTAACTCTAATGCTTCTTCTGCCATTTATGGTTTCTTCAGCTTCTATTGTCAAAAACCTTCCTGGTTTTGATGGGGATCTTCCATTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGAAGCAAAGGTGCAAATATTTTACTATTTTGTGGAGTCTCAAAGAAATCCTTTCATTGATCCAATTTTACTTTGGTTCATTGGTGGTCCTGGATGCTCTGCCCTTTCAGCGTTCTTTCTTGAAAATGGACCTTTAAGAATGGATGACAATTACAGTGGGAACCTTCCAAAGCTTAAATTGAATCCATATGGTTGGACACATATGTTGAATATGATATACATAGATATGCCAGTAGGGACTGGATTTTCTTACTCAGAAACACAAGAAGGCTACTATGGCAGTGCCACACTTTGGGTGGAACATTCATATACTTTTTTACAAAGGTGGTTTCTTGATCATCCAAACTTTAGCTTGAATCCATTTTACATTGGTTGTGGCTCATATTCAGGAATACCTACTGGTCCTCTTGTTCAAAAAGTATATGAAGGATACATAGCAAAAGCTGTGCCACACATAAACATCAAAGGTTATGTGATTGCAAGCCCAGCCTTTGACACATATCACTATATCGACACGAGAATTTTATATGCATACCATATGACTCTAATATCAAAAGAACTCTATGAGTCATTGGAAGAAAATTGTAAGGGTAATTATGCAAACATCGATCCAGATAACACTAAGTGTCTCTCAGATTATCAAGATTATTCTCAGATAGTTAGGTATATAAACGAACCACAAATTTTAGAACCTCTCTGTATCACTACACCTGGTGTGAACCAAGTAATTCAACAACCAGTTCAAGATGATCAAGAATTACGGTGTAGAAGTTATTACAATATTCTTCTTAACACATGGGCAAACGATGAAAATGTGCGGAAAGCCCTTCATGTCAGAGAGGGAACAAAAGGGGAGTTCTTGATATGCAACAGGACTGATTTGGCATACACACACGATCTAACCAATGTGGTAGAATATTATCTCAATCTCACACATGCCAACCTCCAAGCTCTCGTTTATTGTTCTGATCTTGACATGTCAATACCCCACATTGATACACAATTTTGGATCAAGTCATTCAACATGAGCATACATGACAAATGGCGTGCATGGTTTGTCGAAGGTCAAGTGGCCGGATTCACAGAAATCTACAAAATGAAAGCAGACCACTACTTAACATATGTGACCGTGAAGGGTGCTGGACATGTGGCCCATAGATATAAGCCCAAGGAAGTTTATAATATGATCAAGAGGTGGTTTTCATTTTCTCTTATCTAA 1374 0.3821 MGWRCSCVVVVLVTLMLLLPFMVSSASIVKNLPGFDGDLPFKLETGYIGVGEEAKVQIFYYFVESQRNPFIDPILLWFIGGPGCSALSAFFLENGPLRMDDNYSGNLPKLKLNPYGWTHMLNMIYIDMPVGTGFSYSETQEGYYGSATLWVEHSYTFLQRWFLDHPNFSLNPFYIGCGSYSGIPTGPLVQKVYEGYIAKAVPHINIKGYVIASPAFDTYHYIDTRILYAYHMTLISKELYESLEENCKGNYANIDPDNTKCLSDYQDYSQIVRYINEPQILEPLCITTPGVNQVIQQPVQDDQELRCRSYYNILLNTWANDENVRKALHVREGTKGEFLICNRTDLAYTHDLTNVVEYYLNLTHANLQALVYCSDLDMSIPHIDTQFWIKSFNMSIHDKWRAWFVEGQVAGFTEIYKMKADHYLTYVTVKGAGHVAHRYKPKEVYNMIKRWFSFSLI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4355 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Tpr3g4355 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Tpr3g4355 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Tpr3g4355 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Tpr3g4355 457 Pfam Serine carboxypeptidase 33 453 IPR001563 GO:0004185|GO:0006508
Tpr3g4355 457 SUPERFAMILY alpha/beta-Hydrolases 26 452 IPR029058 -
Tpr3g4355 457 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 11 454 - -
Tpr3g4355 457 Gene3D alpha/beta hydrolase 23 294 IPR029058 -
Tpr3g4355 457 Gene3D - 307 455 - -
Tpr3g4355 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4355 Tpr-Chr3 48564774 48582690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4355 23 52 Calmodulin-binding Proteins AT2G22960 66.667 3.10e-06 45.8