Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4344 ATGAGGCAATGTATTTTGTGTTCAGCACTTGTTGTTATTGCTCTTTGTGTCTTCACCAGTTTGTTTAACTTTACACAAGCACAACCTCAAACTGCTACTACAGATCCTTATGAGGCTGGAGTTATAAATTCAATATTTAGGAAATGGAGAATATCAGCAGATAAAACTTCATGGAACATAAGTGGTGAGATTTGTAGCGGAAAAGCCATTGATACCATCACTTCCATTGGAGATAATATTTATAACCCTTTCATCAAATGCGATTGTTCCTTCAACAATCAAACTACTTGCCACATTACCTCACTGAAAGTGTCTGCATTGGACGTGGTTAGTGAAATTCCACCTGAGTTATGGACTCTAAATCATCTCACCTTATTGAACCTTGGCCAAAATTACTTGACAGGGTCTATACCTCCCGCGATTGGAAATCTGACTCGTATGCAATACATAAGCTTTGGCATCAATGCTTTGTCAGGAGAGCTTCCAAAGGAATTGGGAAATCTTACTCAGCTGGTTTCATTGGCTTTTGGGGGTAACAAGTTATCAGGGTCTTTGCCATCTGAACTTGGGAAGCTGGTAAATCTACAATCATTCTACATGGATAGTTCTGGAATCAGTGGTCCAATTCCACAGACATTTGCAAGCCTTAAGAATATGTTGCTATTATATGCTTCAGACAATAATCTCACTGGTAGAATACCCGACTTCATAGGAGGTTGGTCTAAGCTTCAAAACTTGAGGTTTCAGGGTAATTCTTTTGAAGGTCCAATACCCTCATCATTTTCCAATTTGACTTCTTTGTCAGAATTGAGAATAAGTGGTTTATCTAATGGTACGTTGAATGTAATAAGGAACATGAAGTCTATACAAATCTTAGAATTGAGAAATAACAATATTTCTGGTTCAATTCCTTCCACCATAGGAGAATTTCAAAATTTGACCCTACTGGACTTAAGCTTCAATAAAATCTCAGGACAAATACCTGGATCAATTTTCAATTTGAGTTCACTCACTTCCTTGTTTCTTGGAAATAACACACTTAGTGGCACTCTCCCTCAGCGGAAAAGTTCATTTCTTAACAACATAGACTTGTCATACAATGATCTATCAGGAATCCTCCCTTCTTGGACAAACGAGCCAAGTTTACAACTGAACGTAGTTGCCAATAACTTGACAATAGTAAATTCAAATACCAGTGGTTTGCCTACTGGGCTCAACTGTCTCCAGAAAAATTTTCCATGCAATCGTGGTGCTGCAAGATATTCTGACTTTGCGATCAAGTGCGGTGGTCCACAAATTACAACTACAGATGGAATTGTGTATCAAACGGACAATGAGACACTTGGTCCTGCTACATACTTTGTTACTGATACAAATAGATGGGCTGTTAGTAATGTTGGAATGTTTTATGGGAGTAGCGATCCTCGTCTGTTCAAAAATTCTATTACAAATCAGTTCACTCGTACTGTGAACTCAGAGCTTTTTAAAACTGCCCGGCTCTCTGCATCATCATTAAGATATTACGGTCTGGGGCTAGAAAATGGTTTTTACAACATTACCCTCCAATTTGCAGAAACAGATATTCTAGATTCTACTTCTACCACATGGAAAAGCCTCGGGAGACGAGTCTTTGATATTTATATCCAGGGGACTCCTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGAGGTGTGTCTTTCAGAGCTGTTCAAAAGCAATTTAGGTCTGAAGTGAAAGAAAACTATCTTGAGGTCCATCTCTTTTGGGCCGGAAAAGGGACTTTGGCTATACCTGGCCCTGGCCAAATTACTTATGGGCCCTTGATTCAAGCCATTAGTGCTACCCCAGATTTCGTACCTACTGTCAGCAATGAACCTCCCAGTTCCAGCAGTAAAAAGAATAGTGTGGGTCTAATCATTGGAATTGTTGTGGGTGTTGGAGTTATTGGCTTACTAGCAGTTTTGGTCATTTTCTATATCATTCGGAGAAGAAAACAATATGACGACGATGATGAGCTTGTAGGCATTGATACGATGCCAAACACTTTCAGCTATTATGAGTTAAAAAATGCTACTAGCGACTTCAATCGTGACAATAAACTTGGAGAGGGGGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGATTAGTGGCTGTAAAACAATTATCTATAGGATCCCATCAAGGAAAGAGCCAGTTTGTAGCTGAGATTGCTACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTACGAGTATTTAGAAAATAAAAGTCTTGATCAAGCATTGTTTGGAAATGGTTTATTACTCAATTGGTCAACCCGCTATGATGTTTGTATGGGTGTTGCAAGAGGTTTGACATATTTACATGAGGAGTCACGGCTCCGGATTGTGCACCGCGATGTGAAAGCTAGTAATATTCTACTCGATTCTAAGCTTGTCCCAAAAATATCTGACTTTGGCTTGGCCAAATTATATGACGATAAAAAAACGCATATAAGCACCCGTGTTGCTGGGACGATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTCACAGAGAAAGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTTGAGTTAGTTAGTGGGAGGCCAAATTCCGATCCAAGTTTGGAAGGAGAAAAGATGTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAAAGAACTGTATAAATGATCTGATAGATGCTAGACTATCAGAATTCAACACGGAAGAAGTCCAACGCGTTGTGAAAATAGGACTTTTGTGCACTCAGACATCACCAAACTTACGGCCATCAATGTCACGTGTAGTGGCAATGCTTTCAGGAGATGTTGAAGTGAGTGTTGTAATATCAAGGCCCGGATACTTGACTGACTGGAAATTTGACGATGTTAGCAGCATCCTGACTGATGTTTCAACGGCTGGGTTTGAATCAAGTTATTACAATTCATCATCAAATACCAGCATAGTTGGTGGTAGTGCATATATTAATTCACCAAATGATCCATCTAAATCCATCCTTCATTAG 3096 0.3953 MRQCILCSALVVIALCVFTSLFNFTQAQPQTATTDPYEAGVINSIFRKWRISADKTSWNISGEICSGKAIDTITSIGDNIYNPFIKCDCSFNNQTTCHITSLKVSALDVVSEIPPELWTLNHLTLLNLGQNYLTGSIPPAIGNLTRMQYISFGINALSGELPKELGNLTQLVSLAFGGNKLSGSLPSELGKLVNLQSFYMDSSGISGPIPQTFASLKNMLLLYASDNNLTGRIPDFIGGWSKLQNLRFQGNSFEGPIPSSFSNLTSLSELRISGLSNGTLNVIRNMKSIQILELRNNNISGSIPSTIGEFQNLTLLDLSFNKISGQIPGSIFNLSSLTSLFLGNNTLSGTLPQRKSSFLNNIDLSYNDLSGILPSWTNEPSLQLNVVANNLTIVNSNTSGLPTGLNCLQKNFPCNRGAARYSDFAIKCGGPQITTTDGIVYQTDNETLGPATYFVTDTNRWAVSNVGMFYGSSDPRLFKNSITNQFTRTVNSELFKTARLSASSLRYYGLGLENGFYNITLQFAETDILDSTSTTWKSLGRRVFDIYIQGTPVLKDFDIQKEAGGVSFRAVQKQFRSEVKENYLEVHLFWAGKGTLAIPGPGQITYGPLIQAISATPDFVPTVSNEPPSSSSKKNSVGLIIGIVVGVGVIGLLAVLVIFYIIRRRKQYDDDDELVGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRLVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNGLLLNWSTRYDVCMGVARGLTYLHEESRLRIVHRDVKASNILLDSKLVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDPSLEGEKMYLLEWAWQLHEKNCINDLIDARLSEFNTEEVQRVVKIGLLCTQTSPNLRPSMSRVVAMLSGDVEVSVVISRPGYLTDWKFDDVSSILTDVSTAGFESSYYNSSSNTSIVGGSAYINSPNDPSKSILH* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4344 1031 SUPERFAMILY L domain-like 94 393 - -
Tpr3g4344 1031 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 138 1022 - -
Tpr3g4344 1031 Gene3D Transferase(Phosphotransferase) domain 1 772 972 - -
Tpr3g4344 1031 Gene3D - 423 616 - -
Tpr3g4344 1031 Pfam Protein tyrosine and serine/threonine kinase 699 963 IPR001245 GO:0004672|GO:0006468
Tpr3g4344 1031 ProSiteProfiles Leucine-rich repeat profile. 312 334 IPR001611 GO:0005515
Tpr3g4344 1031 Gene3D Ribonuclease Inhibitor 278 400 IPR032675 -
Tpr3g4344 1031 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 138 1022 - -
Tpr3g4344 1031 ProSiteProfiles Protein kinase domain profile. 696 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4344 1031 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Tpr3g4344 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Tpr3g4344 1031 Gene3D Phosphorylase Kinase; domain 1 667 771 - -
Tpr3g4344 1031 Gene3D Ribonuclease Inhibitor 41 277 IPR032675 -
Tpr3g4344 1031 Pfam Malectin domain 423 613 IPR021720 -
Tpr3g4344 1031 CDD STKc_IRAK 702 963 - -
Tpr3g4344 1031 SUPERFAMILY Protein kinase-like (PK-like) 679 990 IPR011009 -
Tpr3g4344 1031 SMART serkin_6 696 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4344 Tpr-Chr3 48494047 48504920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4344 147 989 Receptor kinase-like Gene Family AT1G56120 63.239 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4344 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4344 - - mtr:MTR_8g445800 1563.51