Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4335 ATGAACATTCTTCCTACCATACTCGTTATTGCTAACATACTATTTTTCTTCTCCAAAATTTCCTTTGCAATAAATACAATTACACAATCACATCCACTTCATGATGGAAGCACCTTAGTTTCTAAGGATGGAATATTTGAGTTGGGTTTCTTCAATCTTGGTGATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATTCCTGTTAGAAGAGTCGTTTGGGTCGCCAACCGTGACAACCCAATCAAAGACAATTCTAGCAAGTTGATCATAAGTCGAGATGGAAACCTCGTGCTTCTAAATCAAAATCAAACTCTTGTATGGTCGACAAACACAACAACAAAGGTTTCAAGTCCAATTGTTCAACTCTTGGACAGTGGAAATTTAGTACTTAAAAATAACGGTGATGAAAATAATTTTTTGTGGCAGAGTTTTGATTATCCTTGTGATACAATATTATCAGGAATGAAGGTTGGATGGGACAAAAAAAGAGGTCTTGCTAGGAATATTACTGCATGGAAAAATTGGGATGATCCATCTTCAGGTGAGTTTGTTTCAGCTATGATACTAACTCCTAATCCTGAAAGTTTTATGTTGAAAGGCTCAACAAAATTCTTCAGGACAGGACCATGGACCGGTTCACGATCTAGTGGAGTAACTAGTGGAATAATTGGATTTCAACAAAATCCACTTTTTGATTATGAATTTGTCAACAACGAAGATGAGGTATATTATAAGTTCACACTAAAAAATAGTTCTGTGGTTTCTATAATTGTTTTTAACCAAACTCTTTCTGTTCGTCAACGACTCGTTTGGATTCCAGAATCCAAAATATGGAGTGTTTACCAAACCTTACCGCAAGATAGTTGTGATGCATACAATGTTTGCGGGGCAAATGGGCAATGTGCACTTGATGCATCGCCCATGTGCCAGTGTTTAGATGGATTTAAGCCGAAATCACCACAACAATGGAATGGAATGGACTGGAGACAAGGATGTGTGCGTAATGGTAATTGGAGTTGTGGTGTCAAAAAAAGAGACGGGTTTAAAAAAATTGTTGGGCTGAAATTGCCGGATACTACACATTCTTGGATCGATGAGAAAATGACACTAGAAGAATGCAAGGCTAAATGCTTGGGAAATTGTTCGTGTAGTGCTTACTCGAGTTTAGACTCATCTGAAACAGGTAGCGGTTGTTCGATCTGGTTTGGTGATCTTATTGATTTGAGGGTTTTACAAAGAGGAAACAACGTATATGTTCGAGTAGATGCTTCAGATATCGGTGATGAAAATGCACATAAGAAAATGGTAGAATTGGTGGTATCAATTACAGTTCCGGTAGTCATTGTGATGTTATTGGCATTCACCTACATTTATATAAAAAAGGCAAAATATAAAGGGAAAATAGAGAAAATGACAAGGTTGGAAAAGAAAGATGAAGATACGCATGAAGATTTTGAGCTTCCTATCTATGATATAGCTACAATACTCAAGGCAACAAATAACTTCTCTTTCAACAATAAGCTAGGTGAAGGTGGTTTTGGACCGGTATATAAGGGTATATTGCTTGATGGACAAGAAATTGCTGTCAAAAGACTATCAAAGAGTTCCGGACAAGGATCACAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCGAATAATAGTCTCGATTCATTTCTTTTAGATCCAATACAGAGTAAATTGTTAGATTGGTCCGCACGCTTTAACATTATTTTTGGAATAGCTCGAGGGCTTCTTTATCTTCATCAAGACTCAAGATTAAGGATCATACACAGAGATCTGAAAGTGAGTAATATTTTACTAGACAATGATATGAATCCAAAAATTTCGGATTTTGGCTTGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACAAAATAGTTGGGACATACGGTTATATGGCTCCAGAATATGCCATTGATGGACTATTCTCTATAAAATCAGATGTCTTTAGTTTTGGTGTATTATTATTAGAAATTATTAGTGGAAAGAAAAATAGAGCACGAAACTACCGAGAACATGATCATAATCTTATTGGCTATGCATGGAGATTGTGGAAAGAGGGAATTCCAATCAAATTGATCGATGATAACATAAGAGACTCGTGCATTGAATTTGAAGCAATACGTTGTATTCAAATTGGTCTATTATGCCTACAACATCATCCCGACGATAGACCAAACATGACATCTGTAGTTGTGATGTTAAATAGCGAAAATACTTTATCTATACCTAAGGAGCCTGGTTTCTTGATTAAGTTCTCTGCTGAAGGAGAACCTTCTTCCGGAAAAGAAACATCTTCAACAAATGAAATAACTATATCAATATTAGAGGCCAGAATAAATCAATGCAAAATGAACATTCTTCCAACCATACTCGTTATTGCTAACATACTATTTTTCTTCTCCAAAATTTCCTTTGCAATAGATACAATTACACAATCACTTCCCGATGGAAGCACCTTAGTTTCTAAGGATGGAATATTTGAGTTGGGTTTCTTCAATCTTGGTGATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATACCTGTTAGAAGAGTCGTTTGGGTCGCCAACCGTGACAACCCAATCAAAGACAATTCTAGCAAGTTGATCATAAGTCGAGATGGAAACCTCTTGCTTCTAAATCAAAATCAAACTCTTCTATGGGCGACAAACACAACAACAAAGGTTTCAAGTCCAATTGTTCAACTCTTGGACAGTGGAAATTTAGTACTTAAAACTAACGGTGATGAAAATAATTTTTTGTGGCAGAGTTTTGATTATCCTTGTGATACAATATTATCGGGAATGAAGGTTGGATGGGACAAAAAAAGAGGTCTTGCTAGGAATATCACTGCATGGAAAAATTGGGATGATCCATCTTCAGGTGAGTTTGCTTCAGCTATGATACTAACTCCTAATCCTGAAAGTTTTATGTTGAAAGACTCAACAAAATTCTTCAGGACAGGACCATGGACCGGTTCACGATCTAGTGGAATAATTGGATTTCAACAAAATCCAATTTATGATTATGAATTTGTCAACAATGAAGATGAGGTATATTATATGTTTACACTCAAAAATAGTTATGTGGTTTCTATAATTGTTTTTAACCAAACACTTTCTGTTCGTCAACGACTCGTTTGGATTCCAGAATCCAAAATATGGAGTGTTTACCAAACCATACCGCAAGATAGCTGTGATGCATACAATGTTTGCGGCGCAAATGGGCAATGTGCACTTGATGCATCGCCCATGTGCCAGTGTTTAGATGGATTTAAGCCGAAATCACCACAACAATGGAATGGAATGGACTGGAGACAAGGATGTGTGCGTAATGGTAATTGGAGTTGTGGGGTCAAAAAACGAGACGGGTTTAAAAAAATTGCTGGGCTGAAATTGCCGGATACTACACATTCTTGGATTGATGAGAAAATGACACTAGAAGAATGCAAGGCTAAATGCTTGGGAAATTGTTCGTGTAGTGCTTACTCAAGTTTAGACTCAACTGAAACAGGTAGCGGTTGTTCTATCTGGTTTGGTGATCTTATTGATTTGAGAGTTTTACAAAGAGGAAACAACGTATATGTTCGAGTAGATGCTTCAAATATCGGTGATGAAAATGCACATAAGAAAATGGTAGAATTGGTGGTATCAATTACAGTTCCGGTAGTCATTGTGATGTTATTGGCATTCACCTACATTTATATAAAAAAGGCAAAATATAAAGGGAAAATAAAAAAAATGACAAGGTTGGAAAAGAAAGATGAAGATACACATGAAGATTTTGAGCTTCCTATCTATGATATAGCTACAATACTCAAGGCAACAAATAACTTCTGTTTCAACAATAAGCTAGGTGAAGGTGGTTTTGGACCGGTATATAAGGGTATATTGCTTGATGGACAAGAAATTGCTGTCAAAAGACTATCAAAGAGTTCCGGACAAGGATCACAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAGCATCGAAATCTCGTTAAGGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCGAATAATAGCCTCGATTCATTTCTTTTAGATCCTATACAAAGTAAATTGTTAGATTGGTCCGCACGCTTTAACATTATATTTGGAATAGCTCGAGGGCTTCTTTATCTTCATCAAGACTCAAGATTAAGGATCATACACAGAGATTTGAAAGTGAGTAATATTTTACTAGACAATGATATGAATCCAAAAATTTCGGATTTTGGCTTGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACAAAATAGTTGGCACATACGGTTATATGGCTCCAGAATATGCCATTGATGGACTATTCTCTATAAAATCAGATGTCTTTAGTTTTGGTGTATTATTATTAGAAATTATTAGTGGAAAGAAAAATAGAGCACAAAACTACCGAGAACATGATCATAATCTTATTGGCTATGCATGGAGATTGTGGAAAGAGGGAATTCCACTCAAATTGATTGATGATAATATAAGAGACTCGTGCATTGAATTTGAAGCAATACGTTGTATTCAAATTGCTCTATTATGCTTACAACATCATCCCGACGATAGACCAAACATGACATCTGTAGTTGTGATGTTAAATAGCGAAAATACTTTGTCTATACCTAAGGAGCCTGGTTTCTTGATTAAAAAGTTCTCTGCTGAAGGACAACCTGCTTCTGCAAAAGAAACATCTTCAACAAATGAAATAACTATATCACTATTAGAGGCCAGATAG 4917 0.359 MNILPTILVIANILFFFSKISFAINTITQSHPLHDGSTLVSKDGIFELGFFNLGDSTNRYVGIWYKNIPVRRVVWVANRDNPIKDNSSKLIISRDGNLVLLNQNQTLVWSTNTTTKVSSPIVQLLDSGNLVLKNNGDENNFLWQSFDYPCDTILSGMKVGWDKKRGLARNITAWKNWDDPSSGEFVSAMILTPNPESFMLKGSTKFFRTGPWTGSRSSGVTSGIIGFQQNPLFDYEFVNNEDEVYYKFTLKNSSVVSIIVFNQTLSVRQRLVWIPESKIWSVYQTLPQDSCDAYNVCGANGQCALDASPMCQCLDGFKPKSPQQWNGMDWRQGCVRNGNWSCGVKKRDGFKKIVGLKLPDTTHSWIDEKMTLEECKAKCLGNCSCSAYSSLDSSETGSGCSIWFGDLIDLRVLQRGNNVYVRVDASDIGDENAHKKMVELVVSITVPVVIVMLLAFTYIYIKKAKYKGKIEKMTRLEKKDEDTHEDFELPIYDIATILKATNNFSFNNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSQEFKNEVILCAKLQHRNLVKVVGCCIEGDEKMLIYEYMSNNSLDSFLLDPIQSKLLDWSARFNIIFGIARGLLYLHQDSRLRIIHRDLKVSNILLDNDMNPKISDFGLARMCGGDQIEGRTNKIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRARNYREHDHNLIGYAWRLWKEGIPIKLIDDNIRDSCIEFEAIRCIQIGLLCLQHHPDDRPNMTSVVVMLNSENTLSIPKEPGFLIKFSAEGEPSSGKETSSTNEITISILEARINQCKMNILPTILVIANILFFFSKISFAIDTITQSLPDGSTLVSKDGIFELGFFNLGDSTNRYVGIWYKNIPVRRVVWVANRDNPIKDNSSKLIISRDGNLLLLNQNQTLLWATNTTTKVSSPIVQLLDSGNLVLKTNGDENNFLWQSFDYPCDTILSGMKVGWDKKRGLARNITAWKNWDDPSSGEFASAMILTPNPESFMLKDSTKFFRTGPWTGSRSSGIIGFQQNPIYDYEFVNNEDEVYYMFTLKNSYVVSIIVFNQTLSVRQRLVWIPESKIWSVYQTIPQDSCDAYNVCGANGQCALDASPMCQCLDGFKPKSPQQWNGMDWRQGCVRNGNWSCGVKKRDGFKKIAGLKLPDTTHSWIDEKMTLEECKAKCLGNCSCSAYSSLDSTETGSGCSIWFGDLIDLRVLQRGNNVYVRVDASNIGDENAHKKMVELVVSITVPVVIVMLLAFTYIYIKKAKYKGKIKKMTRLEKKDEDTHEDFELPIYDIATILKATNNFCFNNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSQEFKNEVILCAKLQHRNLVKVVGCCIEGDEKMLIYEYMSNNSLDSFLLDPIQSKLLDWSARFNIIFGIARGLLYLHQDSRLRIIHRDLKVSNILLDNDMNPKISDFGLARMCGGDQIEGRTNKIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRAQNYREHDHNLIGYAWRLWKEGIPLKLIDDNIRDSCIEFEAIRCIQIALLCLQHHPDDRPNMTSVVVMLNSENTLSIPKEPGFLIKKFSAEGQPASAKETSSTNEITISLLEAR* 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4335 1638 CDD PAN_AP_plant 1159 1241 - -
Tpr3g4335 1638 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Tpr3g4335 1638 Gene3D Transferase(Phosphotransferase) domain 1 1398 1603 - -
Tpr3g4335 1638 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Tpr3g4335 1638 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 813 - -
Tpr3g4335 1638 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 854 1631 - -
Tpr3g4335 1638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 854 1631 - -
Tpr3g4335 1638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 813 - -
Tpr3g4335 1638 Pfam Protein tyrosine and serine/threonine kinase 1324 1592 IPR001245 GO:0004672|GO:0006468
Tpr3g4335 1638 Pfam Protein tyrosine and serine/threonine kinase 505 774 IPR001245 GO:0004672|GO:0006468
Tpr3g4335 1638 ProSiteProfiles Protein kinase domain profile. 1322 1599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4335 1638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Tpr3g4335 1638 ProSiteProfiles EGF-like domain profile. 1105 1141 IPR000742 -
Tpr3g4335 1638 SUPERFAMILY Protein kinase-like (PK-like) 487 786 IPR011009 -
Tpr3g4335 1638 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Tpr3g4335 1638 Pfam PAN-like domain 342 410 IPR003609 -
Tpr3g4335 1638 Pfam PAN-like domain 1160 1228 IPR003609 -
Tpr3g4335 1638 CDD STKc_IRAK 1328 1594 - -
Tpr3g4335 1638 CDD STKc_IRAK 510 776 - -
Tpr3g4335 1638 Gene3D - 849 968 IPR036426 -
Tpr3g4335 1638 Gene3D - 19 146 IPR036426 -
Tpr3g4335 1638 Gene3D Hepatocyte Growth Factor 341 424 - -
Tpr3g4335 1638 Gene3D Hepatocyte Growth Factor 1159 1242 - -
Tpr3g4335 1638 CDD B_lectin 30 149 IPR001480 -
Tpr3g4335 1638 Pfam D-mannose binding lectin 895 997 IPR001480 -
Tpr3g4335 1638 Pfam D-mannose binding lectin 73 175 IPR001480 -
Tpr3g4335 1638 SUPERFAMILY alpha-D-mannose-specific plant lectins 895 1002 IPR036426 -
Tpr3g4335 1638 Pfam S-locus glycoprotein domain 1029 1139 IPR000858 GO:0048544
Tpr3g4335 1638 Pfam S-locus glycoprotein domain 207 321 IPR000858 GO:0048544
Tpr3g4335 1638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1443 1455 IPR008271 GO:0004672|GO:0006468
Tpr3g4335 1638 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4335 1638 SMART serkin_6 1322 1593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4335 1638 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4335 1638 SMART egf_5 1108 1153 IPR000742 -
Tpr3g4335 1638 SMART egf_5 290 335 IPR000742 -
Tpr3g4335 1638 CDD PAN_AP_plant 341 423 - -
Tpr3g4335 1638 SMART blect_4 852 971 IPR001480 -
Tpr3g4335 1638 SMART blect_4 30 149 IPR001480 -
Tpr3g4335 1638 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Tpr3g4335 1638 SMART ntp_6 1163 1241 IPR003609 -
Tpr3g4335 1638 SMART ntp_6 345 423 IPR003609 -
Tpr3g4335 1638 CDD B_lectin 852 971 IPR001480 -
Tpr3g4335 1638 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Tpr3g4335 1638 Pfam Domain of unknown function (DUF3403) 778 819 IPR021820 GO:0004674
Tpr3g4335 1638 Gene3D Phosphorylase Kinase; domain 1 464 579 - -
Tpr3g4335 1638 Gene3D Phosphorylase Kinase; domain 1 1282 1397 - -
Tpr3g4335 1638 ProSiteProfiles PAN/Apple domain profile. 1160 1243 IPR003609 -
Tpr3g4335 1638 ProSiteProfiles Bulb-type lectin domain profile. 846 967 IPR001480 -
Tpr3g4335 1638 SUPERFAMILY Protein kinase-like (PK-like) 1305 1601 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4335 Tpr-Chr3 48411711 48428075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4335 440 792 Receptor kinase-like Gene Family AT4G23230 54.366 1.38e-118 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4335 PK_Tyr_Ser-Thr 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4335 - - tcc:18593897 1770.75