Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4326 ATGTCTTCTTCACTCGTCGAGATCCAACACGATCTTCACGATCTTTCTATCAAAGATCTGAGTGAAAATGGGTGTGAAGAACAAGAGAATCACTCTTTGGGATTTGGAAATCATGGGGCAACATGTGCCATATGTTTAGATAATATAGCACTGCAAGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCTTATTGTGTAACGTGCATCCTTCGCTGGGCCACATACAGTCAGAAAGTTACATGCCCTCAGTGCAAACTTCCATTTGAGTTCCTTACTGTCCATCGCACACTTGATGGAAGCATTCAGGATTACATGGTGGAAGAAAGCGTTTGCCTGCTACTTCGGGCTAAGTGGTTCACGCCTTTAACTGTTGTTGAAGAGCGTGTGATTGACGAAGATATCTATTTTGAGGAAATAGAAGAAGATTACTATTTTCAATATGAAGAAGCCGATGATGATCTAGATGACGAAGTTTACTATGGTGGTTCAGCAAGTGTCCGGATTGGCAACCGTAGATGGGGAGACAACGGTTATGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCGACCAAGCTTCCAGGATTCAGGAGCAAGCTCATCACGCGAGCCAAAGAAAAAAGAGCAAGAGGAGTCAAAACGTATGACAGGGAGACGGGCGAAGAGGGCACTGAAAAGGGAAGCTGCTGATAAAGCAGCCGAAGCAAAACATCAGCAGCATTTGGCTAGGTTTGGTAGGAAGTGA 747 0.4538 MSSSLVEIQHDLHDLSIKDLSENGCEEQENHSLGFGNHGATCAICLDNIALQETALVKGCEHAYCVTCILRWATYSQKVTCPQCKLPFEFLTVHRTLDGSIQDYMVEESVCLLLRAKWFTPLTVVEERVIDEDIYFEEIEEDYYFQYEEADDDLDDEVYYGGSASVRIGNRRWGDNGYVRAGRQEARPVHRPSFQDSGASSSREPKKKEQEESKRMTGRRAKRALKREAADKAAEAKHQQHLARFGRK* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4326 248 MobiDBLite consensus disorder prediction 182 248 - -
Tpr3g4326 248 SMART ring_2 42 84 IPR001841 -
Tpr3g4326 248 SUPERFAMILY RING/U-box 41 92 - -
Tpr3g4326 248 MobiDBLite consensus disorder prediction 201 241 - -
Tpr3g4326 248 ProSitePatterns Zinc finger RING-type signature. 60 69 IPR017907 -
Tpr3g4326 248 Pfam Ring finger domain 41 85 IPR001841 -
Tpr3g4326 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 159 IPR013083 -
Tpr3g4326 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 248 - -
Tpr3g4326 248 ProSiteProfiles Zinc finger RING-type profile. 42 85 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4326 12 248 C3H Transcription Factor Family AT5G19430 56.098 4.49e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4326 - - lja:Lj0g3v0250279.1 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4326 3 48272160 48275364 Tpr3g4326 3 48272160 48275364 ECH