Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4308 ATGTTATTTTATTTTATCTTAACCTTATTATTACCTCAAAAAATGTCCACTCTTTTTTTCTTCCTTCTACTTGTTTCCTTCACTTCAATTTCTTCACTTCAACTTTCTTTGAAAAACCAAGCCTCAATCATAGTTTCTATGAAACATGGTTTTGTATTTGACAAAGCTTCAAACTCTTGTTTGAATAGTTGGAACATTTCTAACTACATGTCACTTTGTACTTGGTATGGAATTCAATGTGACCAAAAAAACATGTCTATAGTTTCACTTGACATTTCAAAGTTAAACATTTCAAGTTCATTTTCACCTCATATCACCAAACTTTATACACTTGTGAATGTTTCAATTCAAGAAAATAGCTTCTATGGTGAGTTTCCATCTGAAATTCATAAGCTACAAAGTTTGAAATACCTTAACATATCAAATAATATGTTTAGTGGAAACTTGAGTTGGGAATTCAACAATTTGAAAGAGCTTGAAGTGTTGGATATTTACAACAATGGTTTCAATGGTTCACTTCCAAAGAATGTTACTCAAATGTTGAAGCTTAAGCATTTGAATTTTGGAGGGAATTATTTTAATGGAAAAATTCCTACAAGTTATGGTGAAATGAAAGAGTTGAATTTTTTGTCTCTTGCTGGAAATGATTTGAGTGGTGAGATACCTAGTGAGCTTGGAAATTTGACTAGTTTGGAATATCTTTATTTAGGTTATTTCAATCAATTTGATGGTGGAATTCCAAATGAGTTTGGTAAGTTGATTAATTTGGTTCATTTAGATTTAGCAAGTTGTTTCTTGAAAGGTTCAATTCCAAATGAGTTAGGTCAACTTTACAAGTTAGATACACTTTTCTTGCAAAAAAATCAATTAACCGGTTCGATTCCACCTGAGTTAGGTAATTTGAGTAAATTAAATGCTCTTGATTTATCACTCAATAACCTAACAGGTGGAATCCCGAACGAATTCTCGAACCTTCAAGAACTTTCTCTTTTGAACCTTTTTATCAACAAGTTTCACGGCGAAATACCTGATTTTATTTCTGAGCTTCCTAAATTGCAAGTACTTAAGCTTTGGAGGAATAACTTCACCGGAGTTATTCCTCCAAAGCTAGGTCAGAATAAAAGATTAACCGAACTTGATTTGTCGACAAATAAACTCACTGGAATATTGCCAAAATCACTTTGTCTTGGTAAGAGATTAAAAATCTTGATCTTGCTTAACAACTTCTTGTTTGGTTCTTTGCCTAATGATCTTGGTCAATGCAAAACACTTCAAAGAGTTAGAATTGGTCAAAACTATTTCACAGGTTCAATTCCACATGGTTTTCTTTATTTACCAAATCTCTCTCTTTTGGAACTACAAAACAATTATCTCAATGGTGTGATTCCACAACAAAAAACCAAAAACTCAACAAAATCCAAATTAGAACAATGTAATCTATCAAACAATAGATTATCAGGTTCTTTACCAACTTCAATTGTAAATTTTCCAAATTTGCAAATTCTTCAGCTTAGTGGAAACAGATTCTCAGGTGAAATTCCATCAAATATAGGAAAACTAAAAAAAGTGCTTAAGTTAGATATAAGTAGTAACAAATTTTCAGGTACTATACCTATTGAGATAGGTAAATGTACCTTACTAACTTATTTAGATTTGAGCCAAAACAAATTATCAGGTCCTATTCCAATTCAACTTGCTCAAATTCATATACTAAACCATCTTAATGTCTCATGGAATCACTTAAACCAAAGTCTTCCTAAGGAGCTAAGTGTCTTAAAAGGCTTAACTTCAGCTGATTTCTCTCATAATAACTTCTCCGGTTCGATACCAGAAGGAGGACAATTCTCAACTTTTAAGTCAACTTGTTTTGAAGGTAATCCTCAACTATGTGGTTATGAGTCCAATCCATGCAAAATTTCATCGACGAATGAATTGGACTCGCAACAAAAAAACAGTTCACGAAATGGATTTCGTGGAAAGTTTAAGCTCGTTTTCGCGTTGGCCTTATTGTTATGTTCATTGGTTTTTGCTATTTTTGCTATCATGAAAAGTAGAAAATCGCGGAGGAGTAAGTCAAATTCATGGAAGTTAACAGCATTTCAGAAAATCGAATATGGAAGTGAAGAAATTGTTGGTTGCATAAAGGAAAGTAATGTGATAGGAAAAGGTGGAGCTGGTGTTGTGTACAAAGGAACAATGCCAAATGGAGATGAAATCGCGGTGAAGAAATTGTTAGGAATCAACAATGGTTCATCTTCTCATCAAGATAATGGTTTCTCAGCTGAGATTAAGACACTAGGTAGAATAAGACACCGATATATCGTTAGGTTGGTTGCGTTTTGTTCAAACAAAGAAACAAATTTGCTTGTGTATGATTATATGGAAAATGGTAGTCTTGGTGAAGTTTTGCATGGAAAAAGAGGTGAGTTTTTGAAATGGGATGTTAGGTTGAAAATTGGTGTTGAAGCTGCTAAAGGACTTTGTTATTTGCATCATGATTGTTCACCTTTGATTATTCATAGAGATGTTAAGTCAAATAATATTTTGTTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTTATGCAAGATAATGGAAATTCTGAATGCATGTCTTCTATTGCTGGTTCTTATGGATATATTGCTCCAGAATATGCATACACATTGAAAGTTGATGAAAAAAGTGATGTATATAGTTTTGGAGTGGTGTTACTAGAGCTCATAACAGGAAAAAGGCCAGTTGGGGATTTTGAGGAAGAAGGATTAGACATTGTTCAATGGACAAAAATGAAAACCAATTGGAACAAAGATATGGTGATTAAGATCCTTGATGAGAGACTACCTCAAATTCCTTTAGATGAAGCAAAACAAGTGTTTTTTGTGGCAATGTTATGTGTTCATGAACATAGTGTTGAGAGACCAACAATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAGTAA 2979 0.3317 MLFYFILTLLLPQKMSTLFFFLLLVSFTSISSLQLSLKNQASIIVSMKHGFVFDKASNSCLNSWNISNYMSLCTWYGIQCDQKNMSIVSLDISKLNISSSFSPHITKLYTLVNVSIQENSFYGEFPSEIHKLQSLKYLNISNNMFSGNLSWEFNNLKELEVLDIYNNGFNGSLPKNVTQMLKLKHLNFGGNYFNGKIPTSYGEMKELNFLSLAGNDLSGEIPSELGNLTSLEYLYLGYFNQFDGGIPNEFGKLINLVHLDLASCFLKGSIPNELGQLYKLDTLFLQKNQLTGSIPPELGNLSKLNALDLSLNNLTGGIPNEFSNLQELSLLNLFINKFHGEIPDFISELPKLQVLKLWRNNFTGVIPPKLGQNKRLTELDLSTNKLTGILPKSLCLGKRLKILILLNNFLFGSLPNDLGQCKTLQRVRIGQNYFTGSIPHGFLYLPNLSLLELQNNYLNGVIPQQKTKNSTKSKLEQCNLSNNRLSGSLPTSIVNFPNLQILQLSGNRFSGEIPSNIGKLKKVLKLDISSNKFSGTIPIEIGKCTLLTYLDLSQNKLSGPIPIQLAQIHILNHLNVSWNHLNQSLPKELSVLKGLTSADFSHNNFSGSIPEGGQFSTFKSTCFEGNPQLCGYESNPCKISSTNELDSQQKNSSRNGFRGKFKLVFALALLLCSLVFAIFAIMKSRKSRRSKSNSWKLTAFQKIEYGSEEIVGCIKESNVIGKGGAGVVYKGTMPNGDEIAVKKLLGINNGSSSHQDNGFSAEIKTLGRIRHRYIVRLVAFCSNKETNLLVYDYMENGSLGEVLHGKRGEFLKWDVRLKIGVEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFMQDNGNSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKRPVGDFEEEGLDIVQWTKMKTNWNKDMVIKILDERLPQIPLDEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAK* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4308 992 PANTHER UNNAMED PRODUCT 16 992 - -
Tpr3g4308 992 Gene3D Ribonuclease Inhibitor 37 201 IPR032675 -
Tpr3g4308 992 SUPERFAMILY RNI-like 138 586 - -
Tpr3g4308 992 Gene3D Transferase(Phosphotransferase) domain 1 794 992 - -
Tpr3g4308 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Tpr3g4308 992 Gene3D Phosphorylase Kinase; domain 1 680 793 - -
Tpr3g4308 992 Pfam Leucine rich repeat N-terminal domain 38 81 IPR013210 -
Tpr3g4308 992 Gene3D Ribonuclease Inhibitor 219 340 IPR032675 -
Tpr3g4308 992 SMART LRR_typ_2 156 180 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 349 373 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 204 228 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 374 396 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 132 155 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 496 520 IPR003591 -
Tpr3g4308 992 SMART LRR_typ_2 277 301 IPR003591 -
Tpr3g4308 992 SUPERFAMILY Protein kinase-like (PK-like) 708 988 IPR011009 -
Tpr3g4308 992 Pfam Leucine Rich Repeat 255 275 IPR001611 GO:0005515
Tpr3g4308 992 SMART serkin_6 714 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4308 992 ProSiteProfiles Protein kinase domain profile. 714 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4308 992 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 16 992 - -
Tpr3g4308 992 Gene3D Ribonuclease Inhibitor 341 645 IPR032675 -
Tpr3g4308 992 Pfam Protein tyrosine and serine/threonine kinase 716 988 IPR001245 GO:0004672|GO:0006468
Tpr3g4308 992 ProSiteProfiles Leucine-rich repeat profile. 375 396 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4308 Tpr-Chr3 48084840 48090559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4308 58 990 Receptor kinase-like Gene Family AT5G65700 56.471 0.0 1061
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr3g4308 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4308 - - gmx:100803075 1463.36