Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4284 ATGAAGAATAATAATAATTCAAAGAGAAGTGGTGTAAGAAAGTATCACAAATCAGAACAACCACGCTTGAGATGGACACCTGAACTCCATGAATACTTTGTTCAAACTGTTGAAGGTCTTGGTGGAAAACATAAAGCAAGTCCAAAACACATTTTGAATATGATGCAAGTGAAGGGACTAAGAATCTCACACATTAAAAGTCATCTTCAGATGTACAGAAACGTTAAGGGACAGAGGAGTCTTGCACCAATACTGGAAGAAAATGCAAAATTCAATAATCATTCAACATGTTCCACTTATTCGCCCCAAAGATCGAGGAATATCAGTCAAGAACATCAGACGTTATTCAACAAAGGACTTTCACAAACAAGTGAAATGGATCATTATGATCTAAATCAGGAGCCAGAGTCAAGTGCATGCTTTCTTAGTGATATGTCAAATGAAGAAGGGAATAGTAGGACTACAAAATATCTAAATCTCCCATTCCCTTTCAGTTCTCTGTTAATCCCAGTGCCAGTGGTACATAATGATCAAGGCATACATTTTTCTTCACCAAATTCAATAGATAATTCCTTTGTTGACTCCAGTTCTAAAAAATCTAATGGGAGCGATTATATAAACTTAGACCTATCAATTTGA 639 0.3568 MKNNNNSKRSGVRKYHKSEQPRLRWTPELHEYFVQTVEGLGGKHKASPKHILNMMQVKGLRISHIKSHLQMYRNVKGQRSLAPILEENAKFNNHSTCSTYSPQRSRNISQEHQTLFNKGLSQTSEMDHYDLNQEPESSACFLSDMSNEEGNSRTTKYLNLPFPFSSLLIPVPVVHNDQGIHFSSPNSIDNSFVDSSSKKSNGSDYINLDLSI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4284 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Tpr3g4284 212 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 137 IPR044848 GO:0003700
Tpr3g4284 212 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 11 137 - -
Tpr3g4284 212 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g4284 212 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 74 IPR006447 GO:0003677
Tpr3g4284 212 Gene3D - 20 77 - -
Tpr3g4284 212 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Tpr3g4284 212 Pfam Myb-like DNA-binding domain 23 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4284 Tpr-Chr3 47883091 47889166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4284 5 76 G2-like Transcription Factor Family AT1G14600 59.722 3.29e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr3g4284 Myb_DNA-binding 8.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4284 - - gmx:100791958 246.514