Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4282 ATGGAAATTCTATCTTCTATTGTTGGAGCAGTAGTACAACATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTCAGTATGTTAGCAGTTAGTGTTAAAGACCTTGAGGCTGCCAAAGAAAGAATAACCCATTCTGTTGAAGAAGAAAGGAGAAACGGTAAAAAGATTGAAAGAGATGTGATGAACTGGTTAGAGAAAGTGGATGAGGTCATTGTAAAGGCAAATCAGCTTGAAAATGATCCTCGTCGTGCCAATGCTAGGTGCTCAGCATGCCCGTTCCCCAATTTGATTTTGCGTCATCAACTGAGTAGGAAAGCCACAAAAATTGTAAAAGATGTTATTGAAGTTCAAGAAAAAGGGAAGTTTGATCGAATTGGTTACCTTCCCATCTTAGATGGAGAAGCCTCCTCCTCCTCAACAAGAGGTGGTGAAAATTATGAGACAAGGGAAACACTTAAAGAGAACATTATGAAGGCTCTAGCACACAATAATTCACGCAACATTGGGGTCTATGGGCTGGGTGGGATGGGTAAGACCAGTCTGGTGGAGGAAGTTGCTAAAATATCTGAGCAACACAAATTGTTTGATAAAGTTGTTACAACGAATGTAACAAAAGATCCAGACATTAAAAGAATTCAAGGGGAGATTGCAGATTTGTTGGGTCTGCGATTCGATGAGGAGACTATTCTTGGCAGAGCACGTCGCCTAAGTCAAAGAATAAAGATGGAGAAAAATATCCTTATCGTTCTAGATGATATATGGACCATACTTGATTTGAAGAAAGTCGGAATTCCATTTGCTAATGAACATAATGGTTGTAAATTGTTGATGACATCCAGAAATCAAGATATGTTGCTGCAAATGGATGTTCCAAAGGATTTCACTTTCAAACTTGAACTTATGAGTGAAAATGAGACATGGAGCTTGTTTCAATTAATGGTTGGGGATGTGGTTAAAGATAGAAATTTGCAAGGTTTAGCAATTGAAGTTGCCCAAAAATGTGCAGGTTTGCCTCTTGTGGTAGTGGCGGTAGCTCGAGCATTGAAAGATAAGAGGGATGTTCAATCTTGGAAAGATGCATTAAGGAGATTACAAAGTGGTCATCATACAATTTTTTCTGCTTTGGAATTGAGTTACGACTCATTGGAGAGTGATGAAATGAGGGATGTCTTCTTGCTTTTTGCATTATTTCCAAATGATAAGGTAGATTACTTTCTTATAGTTGCAATGGGTTTGGATATATTAAAAGATATTAAGACTGTGGATGATGCTAGAAACAGACTTAATCCAATAATCCATTCTTTGGAGGCGTCTTGTTTGATTGATATTAAAACAAGTGGAAAAATCCAAATGCATGACTTTGTTCGGGATTTTGCTATCTCCATAGCACGTAGGAAGAAACATGTATTTCTAAGAAAACAATCAGATGAGGAATACCCAACCATGGATTTTTTAACAAGGTGCACGCAGGTCGTTATAGATAGTTGTGTGCTCGAGCTTCCTCAAATGATTGACTGTCCAAACATTAAGTTTTTCTGTTTGATTAGTAAGAAGAACCATTCTTTAGAAGTTCCTGATGATTATTTTGAGGGTATGGGAAGCCTTAGAGTCCTAGATTTAACATTGTTGAACTTGTCTTCATTACCCACTTCATTTCGGTTCCTAACCAACCTTCAAACACTGTGTCTGAATTATTGTATTTTGGAAAATATGGTTGAGATAGGAGCTTTGCAAAATTTAGTTATTCTTTGCCTTGAGGGTTCTTCAATGACCATGTTGCCAAGAGAAATACGACAATTGACTCAATTGAGAATGCTTGATTTGAGAAATTCAGGAATAGAAGTAATCCCACCCAACATTATATCAAGCTTGACCAAACTGGAGGAGTTGTACATGGGCAATACCTTTGTTAATTGGGGAGATGCGAGTTCAACGGCTCAAAACAAAAATGCTAGCATTTCTGAGCTTCAAAAACTACCCAAGTTGACAACTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGATTTGCAGACGGTGTTCGAGAAGTTGGAAAGATATAAAATAATTATTGGTGATGTATGGGAATGGTCTGACATTGTGGATGAAACCTCAAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTAGATGGAATTCAAAATGTGGTTTATCAATTAAATGGAGAAGGATTTCCGTTGCTGAAACATCTCCACGTCCAAAATAATGCAAACATGAAGCATATTGTTGACTCTCAAGAGAGGAATCAAATCCATGCGTCCTTTCCCATCTTGGAAACACTAGTACTTCATAATCTTAAAAACTTGGAGCATATATGTCTTAATCCACTTTCAATTACTTGTTTTGGAAGTCTTAGTGTTATCAAAGTCAAAAATTGTGTGCAATTGAAATATCTTTTCTCCTTTACATTGATTAAAGAACTTTCCCAACTTTCTAAGATTGAAGTTTGTCAGTGCAATTCTATGAAAGAGATAGTGCTCGGAGACAACAGTTCAAGTGCATCAACAATTTTTCGATTTCGTTCTTTGACTTTAGAATATTTGGAGACACTTCAGAATTTCTTCTCCAGAAGTGAGCAAAAAGATCAAGGGTTAGAGCCTTCTGTTTCAACACCATTGTTCAATGATCAGGTTGCATTTCCAGATTTGGATTTCCTTAAATTGAGTTTTCTCAATTCGAATAAAATTTGGAATGACAATCATCGGTCTATGTGCAACTTAACGAGCTTGATTGTGGAGAGTTGTGGTGGATTGAAGTACTTATTCTCGTCTATTATGGTTAAAAGTTTTGAGAACCTCAAACAACTTGAAATAAGTAATTGTCCTTTGATGGAGGATATAATAGCCAAAAAAGAAAGAAACAATAAAATGGAAGAGGTTCATTTTTCTAAATTAGAGAAAATCACATTGAAAGACATGGACAACTTGAACACAATATGGCACCGCGAATTTGTAACAGTGAAGATGTTGCAAGTGAGCAATTGTAAGAAAATTGTTGTTGTTTTTCCTTCTTCAATGCAAAAAACATATGATAAGTTAGAGATGTTGGAGGTTACAGATTGTGCTTTGGTAGAAGAGATATTTGAATTGAGTTTCAATGAAAATAGCAGTGCAGAGAATACAACACATTTGAAAGTTGTTATAGATGGATTGCCAAAACTGAAAAATATATGGAGTGGGGATCTTCGCAGAATTCTTAGTTTTCAAACTCTTATTTTTGTAAAACTTAGAAACTGTGAAAGCTTGGAGTATCTATTACCACTTCCTATAGCCACTCGTTGTTCACATCTCCAAGAACTTCATATAGACAGTTGTGAAAATATGAAGGAAATTGTTGCAGAGGAGAATGAATCTAGTGTGAGTGCAGCTCCCACATTTGAGTTTAATCAACTAACTAGTTTATCACTTTTGTACTTAGATAAACTCAAGGGTTTCTATGCTAAAAAGCATACTCTAACATGTCCATCTTTGAAGGAAATTGATGTTTTCGATTGTGCAAAGTTGAATTTGTTCAGAACTCTATCCACAAGAAGCTCCAATTTTCAAGATTACAAACTCTCCGTTTTAAGCCAACAACCACTTTTCATTGTCGAAGAGGTTATTCCAAATTTGAAGGTGTTGAAAATAAATCACAAAGAAGCTAACGTGATATTGCAAGCCCAAAACTCAAGTGCCCTGTTCACCAAAATGACATTTCTTTGTTTGTTCCATTATATTATTGAAGATGCTACATTTCCTTATTGGTTTCTTCAAAATGTGCACACTCTTGAGGAACTATATGTTGAATGGAGTTGCTTCAAGAAAATATTTCAAGATGAAGGACAAATAAGTGAGAAGAAGACTTACCCACAGCTCAAAATGCTCACATTGAATGGATTACATAAACTTCAACATATATGTGAGGAAGGCTTCCAAATTGACCCAGTTCTTGAGCTCCTTGAATACTTAGGTGTTAAGTTTTGTTCCAGTTTGTTAAGTTTATTGCCTTCCTCTGTCACCCTTCATCATCTTGAATATATGGTGATAAAAGGTTGCAATGGGTTAAGAAAATTAATTACATCATCTACGGCACAAAGTTTGCACAAGCTCACCTCGCTGAAGGTAGAAGACTGTAATTCACTTGAAGAAATAATTACTGGAGAGGAAAATGTTGGCATTGCATTTATTAGTTTAGAATTATTGTTGTTGGATTGTTTGCCAAGCCTCTACAAATTTTGTTCTAGTAAGTGCTTCTTGAAGTTTCCAATGTTGAAGGAAGTAATTGTGACGGAATGTCCTCGCATGAAGATTTTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAATTGCAGAAAATGATGAATGGCTTTGGAAGGGAAACCTAAATGATACAATAACCAACATGTTTGCACACAAGGTTGCATTTCGTAAATTTAAGTGTTTAGCCTTATCTGACTACCCGGAGCTAAAAGATTTGTGGTATGGCCAACTTAATCACAATGTGTTTTGCAATCTCAAGTCCCTAGAAGTGCAAAAATGTGATTTTTTATCACATATACTTTTACCATCAAATATAATACAAGCGCTGCATGGATTGGAAGATTTAAAAGTAACAGACTGTGACTCGTTAGAAGCAGTGTTTGATGTGAAAGGTATGAAGTCTAGAGAAATATTGATAAAACAAAGCACTCAGTTGAAAAGTTTGACTTTATTTAGTTTGCCAAAATTGAAGCAAATATGGAATGAAGATCCTCATGAAATTATCAGCTTTGGAAACTTATGCAAGGTGGATGTTACTATGTGCCAAAGCTTGCTATATATCTTTCCATTGTCACTATGCCAAGATCTTGGATATCTTGAAATGCTTAAGATAGACTCTTGCGGAGTTGAGGAAATTGTAGAAATGGAAGAAGGATCAATGGAAATCAATTTTAATTTTCCCCAACTGAATACATTGGCACTAGGTTTCTTGACAAATCTCAAGAACTTCTATCGAGGAAAACATGCTTTAGCGTGCCCTTCCTTGAAGATTTTTAATGTATACTGTTGTGAAACATTTAAAATGTTTTCATTCAACCATTTAGACTTCCTACAGCCTAACGCAGCAGGCGGAAATCCCATCATACCTCAACAAGCTCTATTTTCTATTGAAAAGTTGAGTCCCAACCTGGAGGAATTGGCAATAAATGGCCCGGATGTGATGGAGATATTGAATCAAGAAAATGTCTTTCATAAAGTTGAATTTCTTCGTTTGCAATGCTTCGAAGAAACTCCAACTATTTTTCTGAATGATATCCATACATCATTTCCTAATCTTAAAACATTTCAAGTGCGTAATAGTTCTTTTGAAACATTGTTCCCTAGTAATGGTCATCTCAGCACGCAGATCTCAGATCAAATAAGTTTCTTGATGCTTTATGAATTGGAAAATCTCAAGCACATCTGGCAGGAAGACTTGGTACCATCATCATCAACATGTTTCACAAATTTAACATTTTTGAAAGTGGACAATTGCAAAGAGCTTACTTATCTAATAACATCCTCAACAGCTAAAAGTCTTGTACAACTCACAACATTAAAAATAATGAATTGTGAGAAGATGTTGGATGTTGTGAAACAGATTGATGAAGAAAAAGCAGAGGAAAACATCATATTTGAAAACTTGGAATACTTGGAATTGTCTTCTTTGCCAAGTTTTAGAAGCTTCTGTTATGGGAAACAAACATTCATATTCCCATCTTTCATATATTTCATTGTTAAAGGGTGCCCTCGAATGAAGATATTCTCATCAGGAGTCACAGTAGCACCATACCTGACAAAAATTGAATTGGAGGAAGGAGAGATGAGATGGAAAGGTGATCTTAATACAACCATTGAACAATTGTTCATAGAAAAGGAAGTCCCACATTCTAATGTTGAATGA 6024 0.3581 MEILSSIVGAVVQHTVVPIGRQASYLIFYKGNFSMLAVSVKDLEAAKERITHSVEEERRNGKKIERDVMNWLEKVDEVIVKANQLENDPRRANARCSACPFPNLILRHQLSRKATKIVKDVIEVQEKGKFDRIGYLPILDGEASSSSTRGGENYETRETLKENIMKALAHNNSRNIGVYGLGGMGKTSLVEEVAKISEQHKLFDKVVTTNVTKDPDIKRIQGEIADLLGLRFDEETILGRARRLSQRIKMEKNILIVLDDIWTILDLKKVGIPFANEHNGCKLLMTSRNQDMLLQMDVPKDFTFKLELMSENETWSLFQLMVGDVVKDRNLQGLAIEVAQKCAGLPLVVVAVARALKDKRDVQSWKDALRRLQSGHHTIFSALELSYDSLESDEMRDVFLLFALFPNDKVDYFLIVAMGLDILKDIKTVDDARNRLNPIIHSLEASCLIDIKTSGKIQMHDFVRDFAISIARRKKHVFLRKQSDEEYPTMDFLTRCTQVVIDSCVLELPQMIDCPNIKFFCLISKKNHSLEVPDDYFEGMGSLRVLDLTLLNLSSLPTSFRFLTNLQTLCLNYCILENMVEIGALQNLVILCLEGSSMTMLPREIRQLTQLRMLDLRNSGIEVIPPNIISSLTKLEELYMGNTFVNWGDASSTAQNKNASISELQKLPKLTTLELQIRETWMLPRDLQTVFEKLERYKIIIGDVWEWSDIVDETSKTLMLKLGTNIHLEHGIKALIKGVENLYLDDVDGIQNVVYQLNGEGFPLLKHLHVQNNANMKHIVDSQERNQIHASFPILETLVLHNLKNLEHICLNPLSITCFGSLSVIKVKNCVQLKYLFSFTLIKELSQLSKIEVCQCNSMKEIVLGDNSSSASTIFRFRSLTLEYLETLQNFFSRSEQKDQGLEPSVSTPLFNDQVAFPDLDFLKLSFLNSNKIWNDNHRSMCNLTSLIVESCGGLKYLFSSIMVKSFENLKQLEISNCPLMEDIIAKKERNNKMEEVHFSKLEKITLKDMDNLNTIWHREFVTVKMLQVSNCKKIVVVFPSSMQKTYDKLEMLEVTDCALVEEIFELSFNENSSAENTTHLKVVIDGLPKLKNIWSGDLRRILSFQTLIFVKLRNCESLEYLLPLPIATRCSHLQELHIDSCENMKEIVAEENESSVSAAPTFEFNQLTSLSLLYLDKLKGFYAKKHTLTCPSLKEIDVFDCAKLNLFRTLSTRSSNFQDYKLSVLSQQPLFIVEEVIPNLKVLKINHKEANVILQAQNSSALFTKMTFLCLFHYIIEDATFPYWFLQNVHTLEELYVEWSCFKKIFQDEGQISEKKTYPQLKMLTLNGLHKLQHICEEGFQIDPVLELLEYLGVKFCSSLLSLLPSSVTLHHLEYMVIKGCNGLRKLITSSTAQSLHKLTSLKVEDCNSLEEIITGEENVGIAFISLELLLLDCLPSLYKFCSSKCFLKFPMLKEVIVTECPRMKIFSEGNTSTPNLRKVKIAENDEWLWKGNLNDTITNMFAHKVAFRKFKCLALSDYPELKDLWYGQLNHNVFCNLKSLEVQKCDFLSHILLPSNIIQALHGLEDLKVTDCDSLEAVFDVKGMKSREILIKQSTQLKSLTLFSLPKLKQIWNEDPHEIISFGNLCKVDVTMCQSLLYIFPLSLCQDLGYLEMLKIDSCGVEEIVEMEEGSMEINFNFPQLNTLALGFLTNLKNFYRGKHALACPSLKIFNVYCCETFKMFSFNHLDFLQPNAAGGNPIIPQQALFSIEKLSPNLEELAINGPDVMEILNQENVFHKVEFLRLQCFEETPTIFLNDIHTSFPNLKTFQVRNSSFETLFPSNGHLSTQISDQISFLMLYELENLKHIWQEDLVPSSSTCFTNLTFLKVDNCKELTYLITSSTAKSLVQLTTLKIMNCEKMLDVVKQIDEEKAEENIIFENLEYLELSSLPSFRSFCYGKQTFIFPSFIYFIVKGCPRMKIFSSGVTVAPYLTKIELEEGEMRWKGDLNTTIEQLFIEKEVPHSNVE* 2008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4282 2007 Gene3D Ribonuclease Inhibitor 915 1163 IPR032675 -
Tpr3g4282 2007 PANTHER - 1622 1728 - -
Tpr3g4282 2007 PANTHER - 1342 1498 - -
Tpr3g4282 2007 PANTHER - 20 1085 - -
Tpr3g4282 2007 PANTHER - 1852 1991 - -
Tpr3g4282 2007 PANTHER - 1104 1250 - -
Tpr3g4282 2007 SUPERFAMILY L domain-like 789 1209 - -
Tpr3g4282 2007 Gene3D Ribonuclease Inhibitor 1736 1986 IPR032675 -
Tpr3g4282 2007 Gene3D - 144 301 IPR027417 -
Tpr3g4282 2007 Coils Coil 68 88 - -
Tpr3g4282 2007 PRINTS Disease resistance protein signature 175 190 - -
Tpr3g4282 2007 PRINTS Disease resistance protein signature 248 262 - -
Tpr3g4282 2007 PRINTS Disease resistance protein signature 342 356 - -
Tpr3g4282 2007 PRINTS Disease resistance protein signature 965 981 - -
Tpr3g4282 2007 Coils Coil 40 60 - -
Tpr3g4282 2007 SMART AAA_5 172 308 IPR003593 -
Tpr3g4282 2007 Pfam NB-ARC domain 157 388 IPR002182 GO:0043531
Tpr3g4282 2007 SUPERFAMILY L domain-like 458 862 - -
Tpr3g4282 2007 Gene3D Ribonuclease Inhibitor 1393 1734 IPR032675 -
Tpr3g4282 2007 Gene3D Ribonuclease Inhibitor 503 897 IPR032675 -
Tpr3g4282 2007 SUPERFAMILY RNI-like 1596 1933 - -
Tpr3g4282 2007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 401 IPR027417 -
Tpr3g4282 2007 Gene3D - 308 391 IPR042197 -
Tpr3g4282 2007 Gene3D Ribonuclease Inhibitor 1217 1392 IPR032675 -
Tpr3g4282 2007 SUPERFAMILY L domain-like 1240 1742 - -
Tpr3g4282 2007 PANTHER RPP4C3 20 1085 - -
Tpr3g4282 2007 PANTHER RPP4C3 1104 1250 - -
Tpr3g4282 2007 PANTHER RPP4C3 1852 1991 - -
Tpr3g4282 2007 PANTHER RPP4C3 1342 1498 - -
Tpr3g4282 2007 PANTHER RPP4C3 1622 1728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4282 Tpr-Chr3 47852930 47873287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4282 174 481 WRKY Transcription Factor Family AT5G45050 23.975 4.82e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4282 - - mtr:MTR_1g037010 2611.25