Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4281 ATGAAGGCACTAACACACCAAAATTCATGCAACATTGGGGTCTATGGGTTGGGTGGGGTGGGTAAAACCACTCTGCTGCAGGAAGTTTTTGAAATGTCTAAGCAACACAAATTGTTTGATACAATTGTTACAACGAATATAACAAAAGATCCAGACATTAAAACAATTCAAGGGGAGATTGCAGATTTGTTGGGTCTACGATTCGATGAGGAGACTATTCTTGGCAGAGCACATCGCCTGAGACAAAGAATCATGATGGAAAAAAATATCCTTATCATTCTAGATGATATATGGACCAAACTTGATTTGAAGAAAGTTGGAATTCCATTTGGCAATGAACATAATGGTTGTAAATTGTTGATGACATCCAGAAATCAAGATGTGTTGCTTCAAATGGATGTTCCAAAGGATTTAACTTTCAAACTTGAACTTATGAGTGAAAACGAGACATGGAGCTTGTTTCAATTTATGGCTGGGGATGTGATTAAAGATAGCAATTTGAAAGGTGTAGCAATTCAAGTTGCCAAAAAATGTGAAGGTTTGCCTCTTGTGGTAGTGGCAGTTGCTCGAGCATTGAAAGATAAGAGGGATGTTCAATCTTGGAAAGATGCATTAAGGAGATTACAAAGTGGTCATCATACAATTTTTTCTGCTTTGGAATTGAGTTACGACTCATTGGAGAGTGATGAAATGAGGGATGTCTTCTTGCTTTTTGCATTATTTCCAAGTCAAATGGTAGATTACTTTCTTAAAGTTGCAATGGGTTTGGATATATTAAAGGATATTAAGACTGTGGATGATGCTAGAAACAGACTGAATCCAATAATCCATTCTTTGGAGGCATCTTGTTTGCTTGAAATGAAAACAAGTGGAAAAATCCAAATGCATGACTTTGTTCGTGATTTTGCTATCTCCATAGCAAGTAGGGACAAACATGTATTTCTGAGAAAACAATCAGATGAGGAATACCCAACCAAGGATTTTTTAACAAGGTGCACGCAGGTCGTTCTAGATGGTTGTGAGCCAGAGCTTCCTCAAATGATTGACTGTCCAAACATGAAGTTTTTGTGTTTGGACAGTAAGAAGAACCGTTCTTTAGAAGTCCCTGATGATTTTTTTGAGGGTATGGGAAGCCTTAGAGTCCTAGATTTAACATCTCTGAACTTGTCTTCATTACCCACTTCGTTTCGGTTCCTAACCGACCTTCAAACACTGTGTTTGTATTTTTGCATTTTGGAAAATATGGTTGAAATCAATGCTTTGCAAAATTTAAAAATTCTTTCCCTTGGGGGTTCTTCAATGACCAAGTTGCCAAGAGAAATAGGGCAATTGACTCAATTGAGAATGCTTGATTTGACCGACTCAGGAATAGAAGTAATCCCACCCAACATTTTATCATGCTTGACTAAACTAGAGGAGTTGTACATGGGCAATACCTTTGTTAATTGGGAAGATGTGACTTCAACGGTTCAAAACAAAAATGCTAGCATTGCTGAGCTTCGAAAACTACCCAAATTGACAACTCTAGAATTAAATATTCCCGAGAGTTGGATGTTGCCAAGGGACTTGCAGACAGTGTTTGAGAAGTTGGAAAGATATAAAATAGCTATTGGTGATGTATGGGAATGGTCTGACATTGTGAATGGAACCTCAAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATAAAGGCATTGATTAAGGGTGTTGAGAATTTGTACTTGGATGATGTAGGTGGAATTCAAAATATGGTTTATCAACTACATGGAGAAGGATTTCCATTGTTGAAACATCTCCACGTCCAAAATAATGCAAACATGAAGCATATTGTTGACTCTCAAGAGAGGAATCAAATCCATGCGTGCTTTCGCATCTTGGAAACACTAGTACTTCATAATCTTAAAAACTTGGAGCATATATGTCTTAATCCACTTTCAATTACTTGTTTTGGAAGTCTTAGTGTTATCAAAGTCAAAAATTGTGTCCAATTGAAATATCTTTTCTCCTTTACATTGGTTAAAGAACTTTCCCAACTTTCTAAGATTGAAGTTTGTCAGTGTAATTCTATGAAGGAGATAGTGCTCGGAGACAACAATTCAAGTGCATCAACAGTTTTTCGATTTCGTTCTTTGACTTTAGAACATTTGGAGACACTTCAGAATTTCATCTCTAGAAGTGAGCAAAAACATCAAGGGTTAGAGCCTTCTGTTTCAACACCATTGTTCAATGATCAGGTTGCATTTCCAGATTTGCATTTCCTTAAATTGAGTTTTCTCGATTTGAATAAAATTTGGAATGACAATTATCGGTCTATGTGCAACTTAACGAGCTTGATTGTGGAGAGTTGTGATGGATTGAAGTACTTATTCTCCTCTATTATGGTTAAAAGTTTTGAGAACCTCAAACAACTTGAAATAAGTAACTGTCCTTTGATGGAGGATATAATAGCCAAAGAAGAAAGAAACAATAAAATGGAAGAGGTTCATTTTTTCAAATTAGAGAAAATCACATTGAAGGACATGGACAACTTGAAGACAATATGGCACCGCCAATTTGAAACAGTGAAGCAATTGGAGGTGATCAATTGTAAGAAAATTGTCGTTGTTTTTCCTTCTTCAATGCAAACAACATATAAAAAGCTAGAGATGTTGAAGGTTACAGATTGTGCTTTGGTAGAAGAGATATTTGAATTGAGTTTCAATGAAAATAGCAGTGCAGAGAATGCAACACATTTGAAAGTTGTTATAGATGGATTGCCAAAACTGAAAAATATATGGAGTGGGGATCTTCACAGAATTCTTAGTTTTCAAATTCTTATATTTGTAAAACTTACAAACTGTGAAAGCTTGGAGTATCTATTACCACTTTCTATAGCCACTTGTTGTTCACATCTCCAAGAACTTCATATAGAAAATTGTGGAAACATGAAGGAAATTGTTGCAGAGGAGAAAGAGAAAGAATTTGGAGTGAGTGCAGCTCCCACATTTGAGTTTAATGAACTAAGTAGTTTATTGCTTTGGAACTTGCATAAACTCAAGGGTTTCTATGCTAAAGAGCATACCCTAGCATGTTTATCTTTGAAGAACATTAATGTTTCCAATTGTGCAAAGTTGAATTTGTACAGAACTCTGTCTACAAGAAGCTCCAATTTTCAAGATGACAAACTCTCCGTTTTAACGCCACAACCACCTTTCATTGTCGAAGAGGTTATTCCAAATTTGAAGATGTTGAGAATAAATAACAATGAAGCTAACGTGATATTGCAAGCTCAAAACTCAAGTGCCCTATTCACCAAAATGAGAGATCTTCATTTGTCCTATCATAATATTGAAGATGCTACATTTCCTTATTGGTTTCTTCAAAATGTGCACACTCTTGAGGAACTATATGTTGAATGGAGTTGCTTCAAGAAAATATTTCAAGATGAAGGACAGATAAGTGAGAAGAAGACTTACCCACGGCTCAAATGCCTCACTTTGTATCAGTTACATAAACTCCAACATATATGTGAAGAAGGATTCAAAATTGACCCAGTTCTTGAGCACCTTGAATACTTAGATGTTGATAATTGTTCTAGTTTGTTAAGTTTGTTACCTGCTTCTGCCACGCTTAATCATCTGGAATATCTGCAGATAACAAATTGCAACGGGTTAAAAAATTTAATCACATCCACTACAGAAAAAAATCTGGACAAGCTCATTTTGCTAAAGGTAAAAGACTGTAATTCACTTGAAGAAATAATTACTGGAGAGGAAAATCTTGGCATTGCATTTATTAGTTTAGAATTATTGATATTGGATTGTTTGCCAAGCCTCACCAAATTTTGTTCTAGTAAGTGCTTCTTGAAGTTTCCAATGTTGAAGGAAGTAATTGTGAGGGAATGTCCTCGCATGAAGATTTTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAATTGCAGAAAATGATGAATGGCTTTGGAAGGGAAACCTAAATGATACAATAACCAACATATTTGAAGATAAGGTTGCATTTCGTAAATTTAACTGTTTAGCCTTATCTGACTACCCTGAGCTAAAAGATTTGTGGTATGGCCAACTTAATCACGATGTGTTTTGCAATCTGAAATCCCTAGTAGTGGAAAGATGTGATTTTTTGTCACATGTACTTTTACCATCAAATGTAATGCAAGCGTTGCATGGATTGGAAGAATTAGAAGTAACAGATTGTGATTCATTAGAAGCTGTGTTTGATGTGAAAAGTATGAAGTCTAGAGAAATATTGATAAAACAAATCACTCAGTTGAAAAGTTTGACTTTATCTAGTTTGCCAAAATTGAAGCACATATGGAATGAGGATCCTCATGAAATTATCAGCTTTGGAAACTTATGCAAGGTGGATGTTTCTATGTGCCAAAGCTTGCTATATATCTTTCCATTGTCACTATGCCAAGATCTTAGACATCTTGAAATGCTTGATATAACGTTTTGCGGAGTTGAGGAAATTGTAGAAATGGAAGAAGGATCAATGGAAATAAATTTTAATTTTCCCCAACTGAATGAATTGGTACTATATCATTTGACAAACCTTAAGAGCTTCTATCGGGGAAAGTATGTTTTAGAGTGCCTTCCTTCCTTGAAGATTCTTAATGTATATCGTTGTGAAGCATTAAGAATGTTTTTCTTCCAACAGCCGAACACAGTGGGCGGAAATCCCATCAGACCTCAACAAGCTCTATTTTCTATTGAAAAGTTGAGCCCCAACCTGGTGGAATTGGCAATAAATGGCCCGGATGTGATGGAGATATTGAATCAAGAAAATGTCTTTCATAAAGTTGAATATCTTCGTTTGCAATGCTTCGATGGAACTCCAACTATATTTCTGAATGATATCCATACATCCTTTCCTAATCTTAAAAAATTTCAAGTGCGTAATAGTTCTTTTGAAACATTGTTCCCCACTAAAGAAACCATTGGTCATCTCAGTATGCATATTTCAAAACAAATAAGAAGTTTGTATCTTTATGAATTGGAAAATCTCAAGTACATATGGCAGGAAGACTTTCCATTGGATCATCCTCTGCTGCAATATCTTGAAGAGTTATCTGCATGGAATTGTCCAAGTTTGATAAGCTTGGTACCATCATCAACATCTTTCACAAATTTAACATATTTGAATGTGGAGAATTGCAAAGAGCTTACTTATTTAATAACATCCTCAACAGCTAAAAGTCTTGTACAACTCACAACATTAATAATAATGAATTGTGAGAAGATGTTGGATGTTGTGAATCAGATTGATGAAGAAAAAGCAGAGGAAAACATCATATTTGAAAACTTGGAATACTTGGAATTGTCTTCTTTGCCAAGTTTTAGAAGCTTCTGTCATGGGAAACAAGCATTCATATTCCCATCTTTCTTACGTTTCATTGTTAAAGGGTGCCCTCAAATGAAGATATTCTCATCTGGAGTCACAGTAGCACCATACCTGACAGAAGTTGAAGTGGAAGAAGGAGAGATGAGATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCTTAGAAAAGGAACTCCCACATTCTAATGTTGAATGA 5604 0.3556 MKALTHQNSCNIGVYGLGGVGKTTLLQEVFEMSKQHKLFDTIVTTNITKDPDIKTIQGEIADLLGLRFDEETILGRAHRLRQRIMMEKNILIILDDIWTKLDLKKVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPKDLTFKLELMSENETWSLFQFMAGDVIKDSNLKGVAIQVAKKCEGLPLVVVAVARALKDKRDVQSWKDALRRLQSGHHTIFSALELSYDSLESDEMRDVFLLFALFPSQMVDYFLKVAMGLDILKDIKTVDDARNRLNPIIHSLEASCLLEMKTSGKIQMHDFVRDFAISIASRDKHVFLRKQSDEEYPTKDFLTRCTQVVLDGCEPELPQMIDCPNMKFLCLDSKKNRSLEVPDDFFEGMGSLRVLDLTSLNLSSLPTSFRFLTDLQTLCLYFCILENMVEINALQNLKILSLGGSSMTKLPREIGQLTQLRMLDLTDSGIEVIPPNILSCLTKLEELYMGNTFVNWEDVTSTVQNKNASIAELRKLPKLTTLELNIPESWMLPRDLQTVFEKLERYKIAIGDVWEWSDIVNGTSKTLMLKLGTNIHLEHGIKALIKGVENLYLDDVGGIQNMVYQLHGEGFPLLKHLHVQNNANMKHIVDSQERNQIHACFRILETLVLHNLKNLEHICLNPLSITCFGSLSVIKVKNCVQLKYLFSFTLVKELSQLSKIEVCQCNSMKEIVLGDNNSSASTVFRFRSLTLEHLETLQNFISRSEQKHQGLEPSVSTPLFNDQVAFPDLHFLKLSFLDLNKIWNDNYRSMCNLTSLIVESCDGLKYLFSSIMVKSFENLKQLEISNCPLMEDIIAKEERNNKMEEVHFFKLEKITLKDMDNLKTIWHRQFETVKQLEVINCKKIVVVFPSSMQTTYKKLEMLKVTDCALVEEIFELSFNENSSAENATHLKVVIDGLPKLKNIWSGDLHRILSFQILIFVKLTNCESLEYLLPLSIATCCSHLQELHIENCGNMKEIVAEEKEKEFGVSAAPTFEFNELSSLLLWNLHKLKGFYAKEHTLACLSLKNINVSNCAKLNLYRTLSTRSSNFQDDKLSVLTPQPPFIVEEVIPNLKMLRINNNEANVILQAQNSSALFTKMRDLHLSYHNIEDATFPYWFLQNVHTLEELYVEWSCFKKIFQDEGQISEKKTYPRLKCLTLYQLHKLQHICEEGFKIDPVLEHLEYLDVDNCSSLLSLLPASATLNHLEYLQITNCNGLKNLITSTTEKNLDKLILLKVKDCNSLEEIITGEENLGIAFISLELLILDCLPSLTKFCSSKCFLKFPMLKEVIVRECPRMKIFSEGNTSTPNLRKVKIAENDEWLWKGNLNDTITNIFEDKVAFRKFNCLALSDYPELKDLWYGQLNHDVFCNLKSLVVERCDFLSHVLLPSNVMQALHGLEELEVTDCDSLEAVFDVKSMKSREILIKQITQLKSLTLSSLPKLKHIWNEDPHEIISFGNLCKVDVSMCQSLLYIFPLSLCQDLRHLEMLDITFCGVEEIVEMEEGSMEINFNFPQLNELVLYHLTNLKSFYRGKYVLECLPSLKILNVYRCEALRMFFFQQPNTVGGNPIRPQQALFSIEKLSPNLVELAINGPDVMEILNQENVFHKVEYLRLQCFDGTPTIFLNDIHTSFPNLKKFQVRNSSFETLFPTKETIGHLSMHISKQIRSLYLYELENLKYIWQEDFPLDHPLLQYLEELSAWNCPSLISLVPSSTSFTNLTYLNVENCKELTYLITSSTAKSLVQLTTLIIMNCEKMLDVVNQIDEEKAEENIIFENLEYLELSSLPSFRSFCHGKQAFIFPSFLRFIVKGCPQMKIFSSGVTVAPYLTEVEVEEGEMRWKGDLNTTIEQLFLEKELPHSNVE* 1868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4281 1867 Pfam NB-ARC domain 7 224 IPR002182 GO:0043531
Tpr3g4281 1867 SMART LRR_typ_2 376 398 IPR003591 -
Tpr3g4281 1867 SMART LRR_typ_2 444 467 IPR003591 -
Tpr3g4281 1867 SMART LRR_typ_2 421 443 IPR003591 -
Tpr3g4281 1867 SUPERFAMILY L domain-like 834 1044 - -
Tpr3g4281 1867 Gene3D - 1 136 IPR027417 -
Tpr3g4281 1867 PRINTS Disease resistance protein signature 11 26 - -
Tpr3g4281 1867 PRINTS Disease resistance protein signature 84 98 - -
Tpr3g4281 1867 PRINTS Disease resistance protein signature 178 192 - -
Tpr3g4281 1867 PRINTS Disease resistance protein signature 801 817 - -
Tpr3g4281 1867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 237 IPR027417 -
Tpr3g4281 1867 SUPERFAMILY RNI-like 1352 1559 - -
Tpr3g4281 1867 Gene3D Ribonuclease Inhibitor 1351 1569 IPR032675 -
Tpr3g4281 1867 Gene3D Ribonuclease Inhibitor 1570 1761 IPR032675 -
Tpr3g4281 1867 Gene3D Ribonuclease Inhibitor 1050 1327 IPR032675 -
Tpr3g4281 1867 PANTHER - 1460 1562 - -
Tpr3g4281 1867 PANTHER - 1703 1851 - -
Tpr3g4281 1867 PANTHER - 1193 1336 - -
Tpr3g4281 1867 PANTHER - 940 1043 - -
Tpr3g4281 1867 PANTHER - 1 919 - -
Tpr3g4281 1867 PANTHER RPP4C3 940 1043 - -
Tpr3g4281 1867 PANTHER RPP4C3 1460 1562 - -
Tpr3g4281 1867 PANTHER RPP4C3 1703 1851 - -
Tpr3g4281 1867 PANTHER RPP4C3 1193 1336 - -
Tpr3g4281 1867 PANTHER RPP4C3 1 919 - -
Tpr3g4281 1867 SUPERFAMILY RNI-like 1586 1793 - -
Tpr3g4281 1867 Gene3D Ribonuclease Inhibitor 331 590 IPR032675 -
Tpr3g4281 1867 Gene3D Ribonuclease Inhibitor 591 987 IPR032675 -
Tpr3g4281 1867 SUPERFAMILY L domain-like 294 875 - -
Tpr3g4281 1867 Gene3D - 144 227 IPR042197 -
Tpr3g4281 1867 SUPERFAMILY L domain-like 1077 1327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4281 Tpr-Chr3 47713801 47730485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4281 12 464 WRKY Transcription Factor Family AT5G45050 22.963 1.03e-13 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4281 - - mtr:MTR_1g037010 2455.63