Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4280 ATGGAAATTCTATTTTCTATTGTTGGAACAATAGCAGAACATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTAAATTCGTTAGCGGATAGTGTTAAAGGCCTTGAGGATGCAAAAAAAACAATAACCCATTCCGTTGAAGAAGAAAAGAGAAACGGTAAAAATATTGAAGAAGCTGTGATGAACTGGTTAGAAAAAGTGGATGAGGTCATTGGAAAGGCAAATCAGCTTGAAAATGATCCTCGTCGTGCCAATGCTAGGTGCTCAGCATGGCCGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAAAGCCACAAAAATTGTACAAGATGTTATTCAAGTTCAAGGAAAAGGGACGTTTAACCGAATTGGTTACCTTCCCCCCCTAGACGGAGAAACCTCCTCCTCTTCAACAAGAGGTGGTGAAAAGTATGAGACAAGGGAGACATTTAAAGAGAACATTATGAATGCTCTAGCACATCATAATTCATGCAATATTGGGGTCTATGGGTTGGGTGGTGTGGGTAAGACCACTCTGGTGGGGGAAGTTTTTGAAATATCTAAGAAACACAAATTGTTTGATGCAGTTGTTAAAACCCATGTAACAAAAAATCCAGACATTAAAACAATTCAAGGGGAGATTGCAGATTGGTTGGGTCTACGGTTCGGTGAGGAGAGTGTTCTCGGAAGAGCACATCGCCTAAGGCAAAGAATCAAGATGGAGAAAAATATCCTTATCGTTCTAGATGATATATGGACAATACTTGATTTGAAGAAAGTGGGAATTCCATTTGGTAATGAACATAATGGTTGTAAATTGTTGATGACATCCAGAAATCAAGATGTGTTGTTGCAAATGGATGTTCCAAAGGATTTCATTTTCAAACTTGAACTTATGAGTCAAAACGAGACATGGAGCTTGTTTCAATTTATGGCTGGGGATGTGATTAAAGATAGCAATTTGAAAGGTGTAGCAATTCAAGTTGCCCAAAAATGTGCAGGTTTGCCTCTTGTGACAGTGACGGTAGCTCAAGCATTGAAAGGTAAGAGGGATGTTCATGCTTGGAAAGATGCATTAAGGAGATTAGAAAGTGATCATCATACAATTTTTTCTGCTTTGGAATTGAGTTACGACTCATTGGAGAATGATGAAATTAGGGATGTCTTCTTGCTTTTTGCATTATTTCCAGATGGTAATGTACAGTACTTTCTAAAAGTTGCAATGGGTTTGGATATATTAAAGGATATTAAGACTGTGGATGATGCTAGAAACAGACTTTATCCAATAATCCATTCTTTGGAGGCGACTTGTTTGCTTGAAGTTAAAAAAAGTGGAGATATCGAAATGCATGACTTTGTTCGTGATTTTGCTATCTCCATAGCACGTAGGGACAAACATGTATTTCTAAAAAAACAATCAGATGAGGAATTCCCAACCAAGAGTTTTTTAACAAGGTGCACGCAGGTTGTTTTAGATGATTGTATGCACGAGCTTCCTCAAATGATTGATTGTCCAAACATTAAGTTTTTCTTTTTGTCCAGCGAGAATCTTTCTTTAGAAGTCCCTGACAATTTTTTTGAGGATATGGGAAGCCTTAAAGTCCTAGATTTAACAGCTTTGAACTTGTCTTCATTACCCACTTCATTTCGGTTCCTAACCAACCTTCAAACACTGTGTCTGAATTATTGTATTTTGGAAAATATGGTTGAGATAGAAGCTTTGCAAAATTTAGTTATTCTTTGCCTTTTGGGTTCTTCAATGACCAAGTTGCCAAGAGAAATACGACAATTGACTCAATTGAGAATGCTTGATTTGAGCGATTCAGGAATAGAAGTAATCCCACCCAACATTATATCAAGCTTGACCAAACTGGAGGAGTTGTACATGGGAAATACCTTTGTTAATTGGGGAGATGCGAGTCCAACGGCTCAAAACAAAAATGCTAGCATTTCTGAGCTTCGAAAACTACCCAAGTTGACAACTCTTGAATTACAAATTCGCGAGACATGGATGTTGCCAAGGGATTTGCAGACGGTGTTCGAGAAGTTGGAAAGATATAAAATAGCTATTGGTGATGTATGGGAATGGTCTGACATAGTGGATGGAACCTCAAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTAGACGGAATTCAAAATGTGGTTTATCAATTAAATGGAGAAGGATTTCCGTTGCTGAAATATCTCCACGTCCAAAATAATGCAAACATGAAGCATATTGTTGACTCTCATGAGAGGAATCAAATCCACATGTCCTTTCCAATTTTGGAAACACTAGTACTTGATAATCTTGAAAATTTGGAGCATATATGTCTTGGTCCACTTTCAACCACTTCTTTTAGAAGTCTTGGTGTTATCAAAGTCAAACATTGTGACCATTTGAAATATCTTTTCTCCTTTACATTGGTTAAAGAGCTTTCACACCTTTCTGAGATTGAAGTTTGTCACTGCAATTCTATGAAGGAGATAGTGCTCGGAGACAACAATTCAAGTGCAAATTCTATAACTAATGAAAAATTTGAGGTTTTTCTATTTCGTTCTTTGACTTTAGAACATATGGAAACACTTCAGGATTTCTTCACCAGAAGTGAGCAAAAGCATCAATGGTTAGAGCCTTATATTTCAACCCCATTTTTCAATGCTCAGGTTTCATTTCCTAACTTGGATACCCTTAAATTGATCTCACTCAATTTGGGTAAATTTTGGGATGACAATCATCAATCAATGTGTAACTTAACTAGCTTGATTGTGGAGAATTGTGGTGGATTGAAGTACTTATTCTCGTTGACTATGGTTGGAAGTCTTAACAACCTCAAACACCTTGAAATAAGCAATTGTCCTCTGATGGAGGAGATAATAGCCAAAGAAGAGACAAACAATGAAATAGAAGAGCACGTTCATTTTTTCAAATTAGAGAAAATCACATTGAAGGACATGGACAACTTGAAGACAATATGGCACCGCCAATTTGAAACAGTGAAGATGTTGCAAGTGAGCAATTGTAAGAAAATTGTGGTGGTTTTTCCTTCTTCAATGCAAAAAACATATACTAAGCTAGAGATGTTGGAGGTTACAGATTGTGCTTTAGTAGAAGAGATATTTGAATTGAGTTTCAATGAAAATAGCAGTGCAGAGAATACAACACTTTTGAAAGTTGTTATAGATGGATTGCCAAAACTGAAAAATATATGGAGTGGGGATCTTCGCAGAATTCTTAGTTTTCAAATTCTTATATTTGTAAAACTTACAAACTGTGAAAGCTTGGAGTATCTATTACCACTTCCTATAGCCAGTTGTTGTTCACATCTCCAAAAACTTCATATAAAAAACTGTGGAAAAATGAAGGAAATTGTTGCAGAGGAGAAGGAGAAAGAATTTGGAGTGAGTGCAGCTCCCACATTTGAGTTTAATGAACTAAGTAGTTTATTGCTTTGGAACTTGCATAAACTCAAGGGTTTCTATGCTAAAGAGCATACCCTAACATGTTCATCTTTGAAGAAAATTGATGTTTTCAATTGTGCAAAGTTGAATTTGTACAGAACTCTATCTACAAGAAGCTCCAATTTTCAAGATGACAAACTCTCCGTTTTAACGCCACAACCACCTTTCATTGTCGAAGAGGTTATTCCAAATTTGAAGGAGTTGAGAATAAATAATAAAGAAGCTAACGTGATATTGCAAGCCCAAAACTCAAGTGCCCTATTCACCAAAATGACATTTCTTTCTTTGTCCCATTATAATATTAAAGATGCTACATTTCCTTATTGGTTTCTTCAAAATGTGCACACTCTTGAGTCACTAGTTGTTGAATGGAGTAGCTTCAAGAAAATATTTCAAGATGAAAGACAAATAAGTGAGAAGAAGACTTACCCACAGCTCAAAATGCTCACATTGTATCAATTACATAAGCTTCAACATATATGTGAGGATGGATTCCAAATTGATCCTGTTCTTGCATTCCTTGAAAACTTATATGTTGATAACTGTTCTAGTTTGTTAAGTTTATTGCCTTCCTCCGCCACCCTTAATCATTTGGAATATCTGGAGATAACAAATTGCAACGGGTTAAAAAAATTAATGACATCTCCTACGGCACAAAGTTTGCACAAGCTCATTTCGCTGAAGGTAAAAGACTGTAATTCACTTGAAGAAATAATTAATGGAGAGGAAAATGTTGGCATTGCATTTATTAGTTTAGAATTATTGATGTTGGATTGTTTGCCAAGGCTCACCAAATTTTGTTCTACTAAGTGCTTCTTGAAGTTTCCAATGTTGGCGGAAGTAATTGTGAGGGAGTGTCCTCGCATGACGATTTTTTCAGAGGGAAACACAAGTACACCAAATCTTCAAAAAGTTAAAATTGCAGAAAATGATGAATGGCTTTGGAAGGGAAACCTAAATGATACAATAACCAACATATTTGGAGATAAGTTTGGTGGTTTTAAGCAATTAAAACTGTCTCGATATCCAGAGTTGAAAGGATTGTGGTATGGTCAACCTCAGCACAATGTATTTAGGAGTCTGAAGTATCTAGTGGTTCATAAATGTGATTTTTTATCTGATGTGCTCTTTCAACCAAATTTGCTAGAAGTGCTAATGAACTTGGAAGAATTAGATATCACATATTGTGATTCATTAGAAGCAGTTTTTGATATGAAAGGTGGTGAATTTGAAAAAGAAATTCTTGTGAAGAATTCTACTCAATTGAAGAAATTAACACTATCTAATCTTCCAAAACTGAAGCATGTATGGAAGGAGGACCAACATAGCACTATGGGGTTTCAAAATTTAATTGAAGTGTCTGTTGAGGAGTGCCCAAGTTTGAAAAGCCTCTTTCCGCTCTCAGTAGCTAGAGATATGAACCAAATTCAAACACTTGAAGTGACTTCATGTGGGATTGAAGAAATTGTTGGCAGGGAGGAAGGAGTGGATGAGATAGTTGAATTTGTGTTTCCTAATTTAACATCCATTAGACTTCACCATTTGGCCAAACTAAAGACATTCTTTGGCGGAGTCCATTCTCTTCAATGTAAATCATTGAAAACGATCAACTTGTTCAGATGTCCAGAAATTGAGCTATTTAAGGCAGAGCCTTTGAGTCAGCAAGTGAGTGCCAGAAATGATGAGCTCAATATCACAACATATCAACCTTTGTTCGTGATTGAAGAGGTATTTAACACTGTGGAGAGGTTGTTCATGAATATGAAATATTTTGACATGATATTGCATAGCCAATATTCAGAGGTTCAATTCAACAAACTCACACACATTGGTGTGGGTGAATTCTACAATGAAGGAGCTACTTTTCCACATTGGTTCTTGAAAAATGTTCCTAATTTAGAAAGAATGCTAGTACAATGGAGTTCCTTCAGGGAGATATTTCAAGGCGAACAAGCCATAATTACGGAAATGGAAACTCAAATTATCCCGCGACTCAAAGAGTTGGAATTATGGCACCTGGACAAGCTTCAATGTATATGCAAAGAAGGACTTCAAATGGACCCCATTCTATATTTTCTTGAAACCATTTATGTTCGGCACTGTTCCAGTCTTATGAAATTGGTGCCTTCTTCTGTTACCTTTAATTACTTGACCTACTTGGAGGTAACAAACTGCAATGGTTTGATAAATTTGATAACATACTCAACAGCAAAGAGTCTTGTCAAACTTGAAACCATGAAGATTAAAATGTGTAATTGTCTTGAGGATGTGGTCAACCGAAAAGAAGAAGATGAGATGAATAAGATTGAATTTTCCAGTTTACAATATCTAGAACTTGTTGCTTTACCAAAACTCTGTCTCTTTTGCTCATGCACGTGCCCCGTTATGTTTCCGTTGCTGGAAGTTGTAGTCGTCAAAGGATGCCCTCGAATGGAACATTTTTCATTTGGTGTGACCAACACAACAATTCTTGAAAATGTACAATTTGATGAAGAAAACCACTGGGAAGGCGACCTCAATGGAACAGTAAAGAAATTGTTTGATGACAAGGAAGTCTCGCATTCTAATGTTGAATGA 6132 0.3645 MEILFSIVGTIAEHTVVPIGRQASYLIFYKGNLNSLADSVKGLEDAKKTITHSVEEEKRNGKNIEEAVMNWLEKVDEVIGKANQLENDPRRANARCSAWPFPNLILRHQLSRKATKIVQDVIQVQGKGTFNRIGYLPPLDGETSSSSTRGGEKYETRETFKENIMNALAHHNSCNIGVYGLGGVGKTTLVGEVFEISKKHKLFDAVVKTHVTKNPDIKTIQGEIADWLGLRFGEESVLGRAHRLRQRIKMEKNILIVLDDIWTILDLKKVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPKDFIFKLELMSQNETWSLFQFMAGDVIKDSNLKGVAIQVAQKCAGLPLVTVTVAQALKGKRDVHAWKDALRRLESDHHTIFSALELSYDSLENDEIRDVFLLFALFPDGNVQYFLKVAMGLDILKDIKTVDDARNRLYPIIHSLEATCLLEVKKSGDIEMHDFVRDFAISIARRDKHVFLKKQSDEEFPTKSFLTRCTQVVLDDCMHELPQMIDCPNIKFFFLSSENLSLEVPDNFFEDMGSLKVLDLTALNLSSLPTSFRFLTNLQTLCLNYCILENMVEIEALQNLVILCLLGSSMTKLPREIRQLTQLRMLDLSDSGIEVIPPNIISSLTKLEELYMGNTFVNWGDASPTAQNKNASISELRKLPKLTTLELQIRETWMLPRDLQTVFEKLERYKIAIGDVWEWSDIVDGTSKTLMLKLGTNIHLEHGIKALIKGVENLYLDDVDGIQNVVYQLNGEGFPLLKYLHVQNNANMKHIVDSHERNQIHMSFPILETLVLDNLENLEHICLGPLSTTSFRSLGVIKVKHCDHLKYLFSFTLVKELSHLSEIEVCHCNSMKEIVLGDNNSSANSITNEKFEVFLFRSLTLEHMETLQDFFTRSEQKHQWLEPYISTPFFNAQVSFPNLDTLKLISLNLGKFWDDNHQSMCNLTSLIVENCGGLKYLFSLTMVGSLNNLKHLEISNCPLMEEIIAKEETNNEIEEHVHFFKLEKITLKDMDNLKTIWHRQFETVKMLQVSNCKKIVVVFPSSMQKTYTKLEMLEVTDCALVEEIFELSFNENSSAENTTLLKVVIDGLPKLKNIWSGDLRRILSFQILIFVKLTNCESLEYLLPLPIASCCSHLQKLHIKNCGKMKEIVAEEKEKEFGVSAAPTFEFNELSSLLLWNLHKLKGFYAKEHTLTCSSLKKIDVFNCAKLNLYRTLSTRSSNFQDDKLSVLTPQPPFIVEEVIPNLKELRINNKEANVILQAQNSSALFTKMTFLSLSHYNIKDATFPYWFLQNVHTLESLVVEWSSFKKIFQDERQISEKKTYPQLKMLTLYQLHKLQHICEDGFQIDPVLAFLENLYVDNCSSLLSLLPSSATLNHLEYLEITNCNGLKKLMTSPTAQSLHKLISLKVKDCNSLEEIINGEENVGIAFISLELLMLDCLPRLTKFCSTKCFLKFPMLAEVIVRECPRMTIFSEGNTSTPNLQKVKIAENDEWLWKGNLNDTITNIFGDKFGGFKQLKLSRYPELKGLWYGQPQHNVFRSLKYLVVHKCDFLSDVLFQPNLLEVLMNLEELDITYCDSLEAVFDMKGGEFEKEILVKNSTQLKKLTLSNLPKLKHVWKEDQHSTMGFQNLIEVSVEECPSLKSLFPLSVARDMNQIQTLEVTSCGIEEIVGREEGVDEIVEFVFPNLTSIRLHHLAKLKTFFGGVHSLQCKSLKTINLFRCPEIELFKAEPLSQQVSARNDELNITTYQPLFVIEEVFNTVERLFMNMKYFDMILHSQYSEVQFNKLTHIGVGEFYNEGATFPHWFLKNVPNLERMLVQWSSFREIFQGEQAIITEMETQIIPRLKELELWHLDKLQCICKEGLQMDPILYFLETIYVRHCSSLMKLVPSSVTFNYLTYLEVTNCNGLINLITYSTAKSLVKLETMKIKMCNCLEDVVNRKEEDEMNKIEFSSLQYLELVALPKLCLFCSCTCPVMFPLLEVVVVKGCPRMEHFSFGVTNTTILENVQFDEENHWEGDLNGTVKKLFDDKEVSHSNVE* 2044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4280 2043 Gene3D Ribonuclease Inhibitor 1231 1400 IPR032675 -
Tpr3g4280 2043 SUPERFAMILY RNI-like 922 1156 - -
Tpr3g4280 2043 SUPERFAMILY L domain-like 459 857 - -
Tpr3g4280 2043 Coils Coil 68 88 - -
Tpr3g4280 2043 Gene3D Ribonuclease Inhibitor 1772 2014 IPR032675 -
Tpr3g4280 2043 Gene3D Ribonuclease Inhibitor 912 1170 IPR032675 -
Tpr3g4280 2043 PANTHER - 20 1092 - -
Tpr3g4280 2043 PANTHER - 1888 2027 - -
Tpr3g4280 2043 PANTHER - 1628 1734 - -
Tpr3g4280 2043 PANTHER - 1111 1214 - -
Tpr3g4280 2043 PANTHER - 1517 1596 - -
Tpr3g4280 2043 PANTHER - 1364 1507 - -
Tpr3g4280 2043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 401 IPR027417 -
Tpr3g4280 2043 SUPERFAMILY RNI-like 1680 1943 - -
Tpr3g4280 2043 Gene3D Ribonuclease Inhibitor 1401 1740 IPR032675 -
Tpr3g4280 2043 Gene3D Ribonuclease Inhibitor 490 875 IPR032675 -
Tpr3g4280 2043 Pfam NB-ARC domain 158 388 IPR002182 GO:0043531
Tpr3g4280 2043 SUPERFAMILY L domain-like 1248 1498 - -
Tpr3g4280 2043 PRINTS Disease resistance protein signature 175 190 - -
Tpr3g4280 2043 PRINTS Disease resistance protein signature 248 262 - -
Tpr3g4280 2043 PRINTS Disease resistance protein signature 342 356 - -
Tpr3g4280 2043 PRINTS Disease resistance protein signature 971 987 - -
Tpr3g4280 2043 PANTHER RPP4C3 20 1092 - -
Tpr3g4280 2043 PANTHER RPP4C3 1628 1734 - -
Tpr3g4280 2043 PANTHER RPP4C3 1888 2027 - -
Tpr3g4280 2043 PANTHER RPP4C3 1517 1596 - -
Tpr3g4280 2043 PANTHER RPP4C3 1111 1214 - -
Tpr3g4280 2043 PANTHER RPP4C3 1364 1507 - -
Tpr3g4280 2043 Gene3D - 144 303 IPR027417 -
Tpr3g4280 2043 SUPERFAMILY RNI-like 1543 1729 - -
Tpr3g4280 2043 Gene3D - 309 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4280 Tpr-Chr3 47660190 47693275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4280 176 627 WRKY Transcription Factor Family AT5G45050 23.432 2.28e-15 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4280 - - mtr:MTR_2g089975 2785.75