Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4278 ATGTTGTTGTTTACTGATTCAATGTTGAAATTCAATCTCTTTCATGTTTTCACTCATACTACTACACTTCACTCTACTGTAACTGTTCATTGCCGCAATCATTTTTCTAATTTATCTGTTTCTGTTTCCAACACAAATCAAGATGACTCTTTTATGTTATCAAACATCATTAACTCAGCTGGGTTGTCCCCTGAAACATCCCTTAAACTCTCTAAAAAGTTGAAACTTAGAAAATATGATGATGACTATGATGGCCCAAATCCTGTAATTCAACTTCTCAGAAACTATGGCTTCTCTGCTTCCCAAATATCAACCCTTGTTAAGAAAAAACCTTTTGTGCTTTTATCAAAAGTTGAAAAGACCCTTTTGCCTAAACTCGAGTTTTTGCTATCCATTGGGGTTTCAATCACTGATCTCCCCAAAATCCTAATTGGGAACACTGATTTATTAACAACAAGTTTGGACAAAAACATTATACCTCTTTATCAGATTATTAGGAGCCTTGTTCGCAATGATAAAGAGGTAGTTTCAGTTTTGAAGCGTTGGACAATGAACTTTTACACTGATTCCATGGTTCCAAACATTGAGGTTTTGAGGAATCATGGTGTGCCTCAACGTTCCGTTTCCCTTTTGGTATCAAATTTCCCCAATGTAGCATTCTGCAAGCATTCTAGATTTGTTGAGGCTGTTAATTTAGTAAAGGAAATGGGGTTCAATCCACTGAAGTCGAATTTTGTTTTGGCAATTCTAGTAATTGCAAGGATGGACAAAGAGACATGGGAATTGAAATTGAAGATTTTTGAGAGGTGGGGATGGTCGGAAGATATCTGTCTTTTAGCGTTCCAAAAGTATCCTCGATATATGGCGACCTCGGAAAAAAAGATTCAAAAAATATTGAGTTTCTTGGTGAACGATATGGGTTTTACACCAGACGACATTGCTAGATGCGCTGCCATTCTGAACCGTAGCTTGGAGAAAACAATTGTCCCTAGATCTACAGTTATTAAGATTTTGAAGTCAAGGGGTTTGATAAAGAGTAGTTTGAGCTTACATAGCTTTATTTCGATTTCTGAGAAAATATTTTTGGATAGATATATTACCCCATTTCAGAAAGATTTGCCACTCTTATTGGATGCATATAAAGGTCAGAATTCCAATCGATCATATGGATTTACTCTTTACTCTGAAGACATTTATTAG 1200 0.3583 MLLFTDSMLKFNLFHVFTHTTTLHSTVTVHCRNHFSNLSVSVSNTNQDDSFMLSNIINSAGLSPETSLKLSKKLKLRKYDDDYDGPNPVIQLLRNYGFSASQISTLVKKKPFVLLSKVEKTLLPKLEFLLSIGVSITDLPKILIGNTDLLTTSLDKNIIPLYQIIRSLVRNDKEVVSVLKRWTMNFYTDSMVPNIEVLRNHGVPQRSVSLLVSNFPNVAFCKHSRFVEAVNLVKEMGFNPLKSNFVLAILVIARMDKETWELKLKIFERWGWSEDICLLAFQKYPRYMATSEKKIQKILSFLVNDMGFTPDDIARCAAILNRSLEKTIVPRSTVIKILKSRGLIKSSLSLHSFISISEKIFLDRYITPFQKDLPLLLDAYKGQNSNRSYGFTLYSEDIY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4278 399 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 383 - -
Tpr3g4278 399 PANTHER CGI-12 PROTEIN-RELATED 24 383 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 Pfam mTERF 90 250 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 Pfam mTERF 254 361 IPR003690 GO:0003690|GO:0006355
Tpr3g4278 399 Gene3D Transcription termination factor 3, mitochondrial 154 372 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4278 Tpr-Chr3 47633491 47640897 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr3g4278 mTERF 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4278 K15032 - gmx:106799612 384.8