Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4277 ATGTTGTTTACTGATTCAATGTTGAAATTCAATCTCTTTCATGTTTTCACTCATAGTACTACACTTCACTCTACTTTAACTGTTCATTGCAGCAATCATTTTTCTAATTTATCTGTTTCTGTTTCCAACACAAATCAAGATGACTCTTTTATGTTATCAAACATCATTAACTCAGCTGGGTTGTCCCCTGAAACAACCCTTAAACTCACAAAAAGGTTGAAACTTAAAAAATCTGATGATGGCCCAAATGCTGTTATTCAACTTCTCAGAAACCATGGCTTCTCTGATTCCCAATTATCAACCCTTGTTAAGAAACACCCTTTAGTGCTTTTATCAAAACCTGAAAATACCCTTTTGCCTAAAATCAAGTTTTTTCTATCCATTGGGGTTTCAATCACTGATCTCCCCAAATTCCTAATTGGTAACATTTCCTTTTTAAAAAGAAGTTTGGAGCAAAACATTATACCTCGTTATCACATTATTAGGAGCCTTGTTCGCGATGATAAAGAGGTTGTTTCAGTTTTTAAGCGTCTGACATGGAACTTTTACAATCTTTCTATGTTAAATGATTCTGTTCCGAACATTGAGGTGTTGAGGAAGCTTGGTGTGCCTCAACGTTCCATTTCCCTTTTGGTATGCAATTTTCCCTATGTAGCATTCACCAACCAGTCTAGATTTGTTGAGGCTGTTAATTTTGTCAAGGAAATGGGGTTCGATCCTTTGAAGTCGTATTTTGTTTTGGCACTTCGAGTAATTGTAATGATGGACAAAGAGACTTGGGAGTCAAAATTGAAGATTTTTGAGAGGTGGGGATGGTCGAAAGATATCTGTGTTTCGGCTTTCCAAAAGTATCCTCTGTATATGACGATCTCAGAAAAAAAGATTATGAAAATAATGAACTTCTTGGTGAAAGATATGGGTCTTACCCCAGAAGACATTGCTAGAAACCCTAATATTCTGAACCGCAACGTGGAGAAGACATTAATACCAAGATGTGCAGTTGTTAAGGTTTTGAAGTCAAGGGGTTTGGTAAAGAGTGATTTGCTCATAGGTACATTTCTTCAAATAAGTGAGAAAACATTTTTGGAGAGATATATTACCCCTTTTCAGAAAGATTTGCCATTGGTATTGGCTGTATATGAAGGTCAGAAGTTAGATTTTTTCACTCATACTTACAACACACTTCACTCTACTGTAACTGTTCATTGCCGCAATCATTTTTCTAATTTCTCTCTTTCTGTTTCCAACACAAATCAAAATGACTCCTTTAAGGTTTCAAGCATCATTAACTCATCTGGGTTGTCCTCTGAAAAAGTTCTTAAACTCAAAAATAGGTTGAAATTCAGAAAATCTGATGATGCCCCAAATGCTGTATTTCAACTTTTCAGAACTTATGGCTTTTCTGCTTTCCAATTATCAAGACTTGTTAAGAAACACCCTTCAGTGCTTTTATCAGATCCTGAAAATACCCTTTTGCCTAAAATCGAGAGCTTTGTTCTCGACGATAAAGATGTAGTTTCAGTTTTTAAGCGTTGGACATGTAACTTTTACTTTGGTTCCATGGTTCAAAACATTGAGGTTTTGAGGAAGCTTGGCTGGTCGAAAGATGTGTGTCTTTTGGCGTTCCATAAGCAACCTCGGTATATAACAGTCTCAGAAAAAAAGATTATGAAAATAATGAGTTTCTTGGTGAACGATATGGGTGTTCCACCAGAAGACATTGCTAGCTGCCCTGTGATTCTGACCCGTAACTTGGAGAAAATTATTGTCCCTAGATGTGCAGTTGTTAAGATTTTGAAGTCAAAGGGTTTGATAAAGAGTGGTTTGCGCATAAGTAGCTTTGTTATCATAAGTGAGAAAACATTTTTGGAGAAATATGTTACCCCATTTGAGAAAGATTTGCCACTCTTATTAGATGGATATAAAGGTCACAAGTCAGATTGA 1944 0.3611 MLFTDSMLKFNLFHVFTHSTTLHSTLTVHCSNHFSNLSVSVSNTNQDDSFMLSNIINSAGLSPETTLKLTKRLKLKKSDDGPNAVIQLLRNHGFSDSQLSTLVKKHPLVLLSKPENTLLPKIKFFLSIGVSITDLPKFLIGNISFLKRSLEQNIIPRYHIIRSLVRDDKEVVSVFKRLTWNFYNLSMLNDSVPNIEVLRKLGVPQRSISLLVCNFPYVAFTNQSRFVEAVNFVKEMGFDPLKSYFVLALRVIVMMDKETWESKLKIFERWGWSKDICVSAFQKYPLYMTISEKKIMKIMNFLVKDMGLTPEDIARNPNILNRNVEKTLIPRCAVVKVLKSRGLVKSDLLIGTFLQISEKTFLERYITPFQKDLPLVLAVYEGQKLDFFTHTYNTLHSTVTVHCRNHFSNFSLSVSNTNQNDSFKVSSIINSSGLSSEKVLKLKNRLKFRKSDDAPNAVFQLFRTYGFSAFQLSRLVKKHPSVLLSDPENTLLPKIESFVLDDKDVVSVFKRWTCNFYFGSMVQNIEVLRKLGWSKDVCLLAFHKQPRYITVSEKKIMKIMSFLVNDMGVPPEDIASCPVILTRNLEKIIVPRCAVVKILKSKGLIKSGLRISSFVIISEKTFLEKYVTPFEKDLPLLLDGYKGHKSD* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4277 647 Gene3D Transcription termination factor 3, mitochondrial 189 372 IPR038538 -
Tpr3g4277 647 Gene3D Transcription termination factor 3, mitochondrial 60 188 IPR038538 -
Tpr3g4277 647 Gene3D Transcription termination factor 3, mitochondrial 397 633 IPR038538 -
Tpr3g4277 647 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 473 534 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 539 570 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 571 605 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 523 644 - -
Tpr3g4277 647 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 397 498 - -
Tpr3g4277 647 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 383 - -
Tpr3g4277 647 Pfam mTERF 86 239 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 Pfam mTERF 449 623 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 Pfam mTERF 252 362 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 PANTHER CGI-12 PROTEIN-RELATED 523 644 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 PANTHER CGI-12 PROTEIN-RELATED 397 498 IPR003690 GO:0003690|GO:0006355
Tpr3g4277 647 PANTHER CGI-12 PROTEIN-RELATED 24 383 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4277 Tpr-Chr3 47624244 47630273 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr3g4277 mTERF 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4277 K15032 - gmx:106799612 472.626