Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4276 ATGTTGTTGTTTTCTGATTCATTGTTAAAATTCAATCTTTTTCATGTTTTCACTCATACTACAACACTTCACTCTACTGTAACTGTTCATTGCCGCAATCATCTTTCTGATTTCTCTGTTTCTGTTTCCAACACAAATCATCATAAAGATCACTCTTTTACGTTATCAAGTATCATTAACTCATCTGGGTTGTCCCCTGAAACAGCTCTTAAACTCTCAAAAAGATTGAAACTCAAAAAATCTGATGATGGCCCAAATGCTGTAATTCAACTTCTCAGAAACTATGGTTTCTCTGATTCCCAATTATCAACCCTTGTTAAGAAACACCCTTTTGTGCTTTTATCAAAACCTGAAAAGACCCTTTTGCCTAAACTCAACTTTTTGCAATCCATTGGGGTTTCAACCACTGATCTCCCCAATGTCCTAATTGGTAACATTTCCTTTTTTACAACAAGTTTGGAGAAAAACATTATACCTCGTTATCACCTTATTAGGAGCATTGTTCGCGATGACAAAGAGGTAGTTTCAGTTTTTAAGCGTGGGACATGGAACTTGGGCGGTGATTCCATGGTTCCAAACATTGAGGTGTTGAAGAAGCTTGGTGTGCCTCAAACTTCCATTTCCCATTTGGTATGCAATTATTCCGCTGTAGCATTCATCGATCATTCTATATTTGTTGAGGCTGTTAATTCAGTCAAGGTAATGGGGTTCGATCCTTCAAAATTGAATTTTGTTTTGGCACTTCAAGTATTTGTTAAGATAAAGAAAGAAATTTGGGAATCAAAATTCAAGATTTTTGAGAGGTTGGGTTGGTCGAAAGATATTTGTGTTTTGGCTTTCCAAAGATATCCTCCGTATATATTGATCTCAGAAAAAAAGATTGTGAAAACAATGAACTTCTTGGTGAAGGATATGGGTCTTTCCCCAGAAGACATCGCTAGAAGCCCTAATATTCTGAACCGCAATTTGGAGAGCACAATAATGCCTAGATGTGCAGTTGTTAAGATTTTGAAGTCAAGGGGTTTGATAAAGAGTGATATGCTCATAGGTACCTTTATTAAAATAAGTGAGAAAACATTTTTCGAGAGATATGTTATCCCATTTCAGAATGATTTGCCGCTAGTATTGGCTGTATATGAAGGTCAGGTGTTAGATTGA 1158 0.3627 MLLFSDSLLKFNLFHVFTHTTTLHSTVTVHCRNHLSDFSVSVSNTNHHKDHSFTLSSIINSSGLSPETALKLSKRLKLKKSDDGPNAVIQLLRNYGFSDSQLSTLVKKHPFVLLSKPEKTLLPKLNFLQSIGVSTTDLPNVLIGNISFFTTSLEKNIIPRYHLIRSIVRDDKEVVSVFKRGTWNLGGDSMVPNIEVLKKLGVPQTSISHLVCNYSAVAFIDHSIFVEAVNSVKVMGFDPSKLNFVLALQVFVKIKKEIWESKFKIFERLGWSKDICVLAFQRYPPYILISEKKIVKTMNFLVKDMGLSPEDIARSPNILNRNLESTIMPRCAVVKILKSRGLIKSDMLIGTFIKISEKTFFERYVIPFQNDLPLVLAVYEGQVLD* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4276 385 Pfam mTERF 251 360 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 Pfam mTERF 89 301 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 Gene3D Transcription termination factor 3, mitochondrial 170 370 IPR038538 -
Tpr3g4276 385 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 383 - -
Tpr3g4276 385 PANTHER CGI-12 PROTEIN-RELATED 35 383 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Tpr3g4276 385 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4276 Tpr-Chr3 47620855 47622460 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr3g4276 mTERF 6.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4276 K15032 - gmx:106799612 394.43