Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4272 ATGGCTATATATACACATTACACAACCACTTTGCCAAACTACAATCAATTTAACAACACCCTTCAATCCATAATTATATCCAAAAACAAAACAAAAATGGATAGTAGAAATGGTGATAATTTCATTGTGAGTGTCACAAATGAAGAGGTGGTGGCAGCAGTGTTACCAATACAAGAACATTGGCTACCACTCTCTAATCTTGACTTACTTCTACCTAAAGTAGATGTTGGAGTGTTCTTTTGTTACAAGAATCCTATGTTGTTGTCCACTTCTACAACATATTTAACCTTTGAATCTATGGTTGTGTCTCTCAAGAAGGCATTAGCTAAGGTTTTGGTCTCTTACTATGCCTTTGCTGGTGAAGTTGTGTCTAATTCTGTTGGTGAACCTGAGCTTCTTTGTAATAACCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTTCAATGCATTAACTTTTATAATCCTGATGAATTTGTTGAAGGAAAGTTTGTTCCGAAGAAGAAGCACGGCGTGCTTGCTATTCAGGTAACTTCATTAAAATGTGGCGGGATAGTAGTAGCATGCACATTTGATCATCGCATAGCAGATGCCTATTCAACAAACATGTTTCTAGTATCATGGGCTGAGATGGCCCACTCAATAAAGCCCACCAAGCCCAAAACCATAACAACCACAAACAAACCATGTTTTCGCCGATCCCTCCTTAGCCCCCGCCATCCCGGATCTATCCACCCTTCTCTTGATGATATGTACATTCCCATTTCAAAACTTCCCCCTCCTTCGGCCACCGCTACCAAGCCGCTACTTAGTCGAATATACCACATCACCGCAGAGGAGCTCCAATGCTTGCAATCACTTGCCGCTGGGACCAATGATGGCAACACCAAGCCTACAAAACTTGAATCTTTCTCTGCCTACTTGTGGAAGTTGATTGCTCATGCAGCCAAAAGGGACCGTAGTAAAATGGTCATTGCCAAAATGGGTATAGTGGTTGATGGAAGAAAGAGACTTGGCAATGATAGTAGCGACGAGAAAGGGAAAGAAGCAATGATGGAACGATATTTTGGGAATGTTCTTTCTATACCATTTGGTGGGAAACCAGTGGAAGAGTTGGTGGATAAGCCATTAGGGTGGGTGGTTGACGAGGTCCGTGAGTTTGTATCAGTAGCAACAACGGAAGAACATTTTTTGGGGCTCATAGATTGGGTGGAAGAGAATCGACCTGTCCCTGGATTGGCGAAGATTTATTGCGGTTCCTCTAGCGAGGGACCAACTTTTGTGGTGTCTTCCGGACAAAGGTTTCCGGAAGACAAGGTTAATTTTGGGTGGGGGAAAGTTGTGTTTGCATCTTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTTTACATGCACCTTTTGAAAGAGCAGTTGGAGATCATAGAGTCCGAGGCAGATCATGTGTTTAGACCTATAACTTGGGATTATCTCAATCAATGA 1530 0.4268 MAIYTHYTTTLPNYNQFNNTLQSIIISKNKTKMDSRNGDNFIVSVTNEEVVAAVLPIQEHWLPLSNLDLLLPKVDVGVFFCYKNPMLLSTSTTYLTFESMVVSLKKALAKVLVSYYAFAGEVVSNSVGEPELLCNNRGVDFVEAVADVELQCINFYNPDEFVEGKFVPKKKHGVLAIQVTSLKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAHSIKPTKPKTITTTNKPCFRRSLLSPRHPGSIHPSLDDMYIPISKLPPPSATATKPLLSRIYHITAEELQCLQSLAAGTNDGNTKPTKLESFSAYLWKLIAHAAKRDRSKMVIAKMGIVVDGRKRLGNDSSDEKGKEAMMERYFGNVLSIPFGGKPVEELVDKPLGWVVDEVREFVSVATTEEHFLGLIDWVEENRPVPGLAKIYCGSSSEGPTFVVSSGQRFPEDKVNFGWGKVVFASYHFPWGGEAGYVMPMPSPLRNGDWIVYMHLLKEQLEIIESEADHVFRPITWDYLNQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4272 509 Gene3D - 42 252 IPR023213 -
Tpr3g4272 509 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 40 504 - -
Tpr3g4272 509 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 40 504 - -
Tpr3g4272 509 Pfam Transferase family 43 497 - -
Tpr3g4272 509 Gene3D - 256 493 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4272 Tpr-Chr3 47568887 47572637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4272 52 492 Monolignol Biosynthesis Gene Families AT5G48930 26.258 1.86e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4272 - - gmx:100785067 683.715