Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4240 ATGCAGCAAGATCATAGGAAAAAGAATTCGACTGAGATGGACTTTTTCTCTGAATATGGCGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTACGGCGTTGTCTGTTCTGCCATTGACACTCATACCGGTGATAAAGTGGCCATTAAGAAAATTCACGACATCTTTGAGCATATATCTGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCTCCTTCTCGAAAGGACTTCAAAGACATTTATGTTGTTTTTGAGCTCATGGAGTCCGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACGAAAGAGCACTATCAGTTTTTTCTTTATCAATTGCTTCGAGCACTGAAGTATATCCACACTGCGAATGTCTACCATCGAGATTTGAAGCCAAAAAATATACTGGCAAATGCAAACTGCAAACTTAAAATTTGTGATTTTGGACTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGGGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACGCCAGCGATTGATATATGGAGTATAGGTTGCATTTTTGCCGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGACTTGCTCGGGACTCCCTCACTGGACACTATATCTCGGGTGCGTAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGAAAAAAACAGCCTGTGCCATTTGCACAAAAATTTCCCAATGCCGACCCTTTAGCACTACGACTATTGGAAAGGTTACTTGCGTTTGACCCGAAAGATCGACCTACTGCTGAAGAGGCATTGGCCGACCCTTACTTCAAGGGACTAGCAAAAGTCGAGAGAGAACCGTCTTGCCAGCCTATCACCAAAATTGAGTTTGAATTTGAAAGACGGAGAGTCACAAAGGAAGAAATTCGAGAGCTAATTTTCCGCGAGATTCTAGAGTATCATCCTCAACTTCTGAAAGACTACATTAATGGAACAGAGAGAACTAATTTTCTATATCCAAGTGCTGTGGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCCGTTGTACCACTTGATCGAAAGCACGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACGATACCGCAGAAAGAGCAAACAAGTATTGCTTCCAGCAAAAACCGGCATACACCCGAGGAATATAATAAGATATGTAGAGATACTGAAATTCCAATGCCAAGGCCTATACAGGGACCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTCGGGCCAGTTGTTCCGTATGAATATGGAAATGTTGTTAAGGATTCTTATGATCCAAGGGCGTTTATAAGAGGTTCTGTGCTTCCTCCTCAACCTGTTCCGCCGGCTTATTACTATCAAAGGCCTGGTAGCACTGCAAATCAAGAAAGGCCAACAGCGGAAAGTGATAAGGGTGTGGTTTTGCAAGCGAAACATGGACAACAATGTGGAGTTGATTCCAAACTTGGACCAGATATAATCATTAATATCGATCCAAATCCATTTTACATGACAAGGGTAGGAGTGAACAAATTAGAAAAAGATGATCAAATTGCAATAGAAACAAACATGTTGCAATCAAAGACTCAATATGGTGGAGTTGGTGCTGCAGCTGGTCCCCCGGCTCATAGAAAAGTTGGTCCTATTCAATATGGTATGACAAGAATGTTCTAG 1845 0.4108 MQQDHRKKNSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGDKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKIEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVVPLDRKHVSLPRSTIVHSNTIPQKEQTSIASSKNRHTPEEYNKICRDTEIPMPRPIQGPQRIPLAKPGKVVGPVVPYEYGNVVKDSYDPRAFIRGSVLPPQPVPPAYYYQRPGSTANQERPTAESDKGVVLQAKHGQQCGVDSKLGPDIIINIDPNPFYMTRVGVNKLEKDDQIAIETNMLQSKTQYGGVGAAAGPPAHRKVGPIQYGMTRMF* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4240 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Tpr3g4240 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4240 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Tpr3g4240 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4240 614 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Tpr3g4240 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr3g4240 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tpr3g4240 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Tpr3g4240 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4240 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tpr3g4240 614 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4240 Tpr-Chr3 47193596 47199916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4240 1 445 MAP Kinase Gene Family AT2G42880 86.996 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr3g4240 Pkinase 8.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4240 - - gmx:100811788 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4240 3 47193596 47199916 Tpr4g3287 4 38853254 38859900 PCT