Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4215 ATGGCAACCATTAAAGCATCTTACACAGTGAAACCAAATGAATCAACTCCAAAGGGTCGTTTGTGGCTCTCAGATTTAGATCAAGTTGTGCGTCTCAGCCACACACCGCTTATTTACATTTACAAATCACAAAAACAGAACCAAAAAAGCAGAGCCATCATAGAAACCTTAAAGAACTCACTCAGCAAGATTCTGGTTCACTACTATCCTATAGCTGGTCGTTATTGTTACAAAGACGGTGGTCGATTAGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGATAGAAGCTCAAACCACTAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGACTCCACCGAAGAGCTTATTCCAAAAGTTGATTATAATCAACCAATAGAAGAAATTCCATTGTTTGTTGTTCAAGTTACAATATTTTCAAACAAAGATGAAAGCTTTGGATTCGCAATTGGAATTGCTTATTCACATCCTTTATCAGATGGAGTTGGTTGTTTTAACTTGTTGAACTCATGGGCCAAAATTTCAAGAGGTGAAACACTTGAAGATAATGAATTACCCTTTTTAGACAGAACAATTCTCAAATTTTCACATACACCAATTGAACCGTGCTTCGAACACATAGAATTGAAGCCGTTGCCACTCATTCTAGGAAGATCTGACAATGATATTGAAAGAAAGAAGAAAACAACAGCTGAATTATTGAAACTCACAAAAGAACAAGTTGAAAAGTTGCAGAAAAAGACTAATGAATTTGATATTCCAAAAGGGTCAAAACCTTATAGCAGATTTGAAGCTATCAGTGCACATATATGGAAATGTGCATCGAAAGCTCGCGAGCTTGAAGAGAATCAACAAAGTGTTGTTAGATTCAATGTTGAAATCAGGAATAGAATAATTCCGAATCTTCCTAAAACTTATTATGGGAATGCTTTGATTCAAACTTCGACAAGAGGGTATATCGGAGAAATCACATCAAAGCCGTTGAATTATATTGCAATGAAGATAAGAGAAGCACATGAGTTGATATCAAATGAGTATATAAGGTCACAAATTGATGTTATTAGAAGTTTTGAGAATTTGGATGATGCAAGAAAATTGTTTATAGGTGGAGAAGGTAAGAATGCAACATTTTTTGGGAATCCTAATCTTCATATAACAAGTTGGATGGCTTTGCCTGCATATAAATCAGATTTTGGGTGGGGAAAGCCATTTTACTTTGGTTTAGGATATGTTTCACCACATGATAGGGGAATAATTTATTTGAATCCTAATGGAGATGGTTCTGTTATTGTGTGTATGCACTTTCAAGTTGCATTGATGCAGATTTTCAAGAAGTTCTTTTATGGGGATATAAATGAGTTGTTCACATCAGCAAAATTGTGA 1389 0.3499 MATIKASYTVKPNESTPKGRLWLSDLDQVVRLSHTPLIYIYKSQKQNQKSRAIIETLKNSLSKILVHYYPIAGRYCYKDGGRLELNLNAKGAVLIEAQTTKTIHDYGDFSPSDSTEELIPKVDYNQPIEEIPLFVVQVTIFSNKDESFGFAIGIAYSHPLSDGVGCFNLLNSWAKISRGETLEDNELPFLDRTILKFSHTPIEPCFEHIELKPLPLILGRSDNDIERKKKTTAELLKLTKEQVEKLQKKTNEFDIPKGSKPYSRFEAISAHIWKCASKARELEENQQSVVRFNVEIRNRIIPNLPKTYYGNALIQTSTRGYIGEITSKPLNYIAMKIREAHELISNEYIRSQIDVIRSFENLDDARKLFIGGEGKNATFFGNPNLHITSWMALPAYKSDFGWGKPFYFGLGYVSPHDRGIIYLNPNGDGSVIVCMHFQVALMQIFKKFFYGDINELFTSAKL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4215 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
Tpr3g4215 462 Coils Coil 229 249 - -
Tpr3g4215 462 Gene3D - 2 213 IPR023213 -
Tpr3g4215 462 Pfam Transferase family 3 449 - -
Tpr3g4215 462 Gene3D - 220 451 IPR023213 -
Tpr3g4215 462 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4215 Tpr-Chr3 46805962 46809410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4215 4 450 Monolignol Biosynthesis Gene Families AT5G48930 33.333 6.77e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4215 K13065 - gmx:100779814 551.977