Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4198 ATGAGTTGTTTTCATTGTTGTGCACCTTCACAAGAAAGAATCAACAAGAAGTCATTGAAGAAAAGTATTAAGGAATACCATAATGCAAAAACATTAACCTCATTTGCCAATATAACTGATAGTGGAAAGAGAAGGTTCATAGCAGAAGAGATAGCAAAGCTTGGAAAAGGAAATCCTACCTCTAAGATTTTTTCGTATCGCGAACTATGTGCTACAACTCAGAATTTTCACTATACCAATATGATTGGAGAAGGAGGCTTCGGAAGGGTATACAAAGGAACAATTAAAAACACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGAAATGGATTTCAAGGGAATAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCATCATCCTAACCTTGTCAATTTAGTAGGGTATTGTGCTGAAGGTGATCAAAGGGTTTTGGTATATGAATATATGCCAAATGGTTCCTTAGAAGATCACTTGCTTGATTTAGCTCCTGGTATAAAGCCTTTGGACTGGAAGACAAGAATGAAAATTGCAGCAGGAGCAGCAAAAGGGCTTGAATATTTACACGAACAAGCAAACCCTCCGGTGATATATCGCGATTTCAAAGCATCAAATATACTATTAGATGAAAACTACAATCCAAAGCTTTCTGACTTTGGACTTGCAAAGCTCGGTCCGACCGGTGATAAAACACATGTATCGACAAGAGTGATGGGAACTTATGGCTATTGTGCTCCAGAGTATGCATCAACAGGGCAATTAACTACAAAATCAGATGTGTATAGTTTCGGAGTCGTGTTTTTGGAGATTATCACAGGAAGAAGAGTCATTGACAATTCAAGACCATCAGAAGAGCAAAATTTAGTCATTTGGGCACAACCTCTTCTAAAAGACAGAAAGAAATTCACACAAATGGCAGATCCATTGCTAGAAAATAAATACCCTATAAAGAGTCTATACCAAGCTCTAGCTGTTGCAGCAATGTGTCTCCAAGAAGAAGCCGATACTCGGCCTTTAATCAGTGATGTAGTTACAGCTCTTGAATTTTTAGCAAAGAAGAAAGATGATGATGGAGAAAAGGTTTCAAAAGATCAGTCTTTTTCTTCCCAAAGTGAAAGTGATAATGGAAACAATGAATCTAATGAAGTAAAGAATGATGATGACAACGACGATGACGAAGAAGAAGAGGATGAGGATGGTGATGACGACGACGATGATGACGATGATGATGAAGACGATGATGGCGATAGTCATAATAATAAAGTTAAAATTACAAGAAGACACAGTCAATGA 1302 0.374 MSCFHCCAPSQERINKKSLKKSIKEYHNAKTLTSFANITDSGKRRFIAEEIAKLGKGNPTSKIFSYRELCATTQNFHYTNMIGEGGFGRVYKGTIKNTDQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGDQRVLVYEYMPNGSLEDHLLDLAPGIKPLDWKTRMKIAAGAAKGLEYLHEQANPPVIYRDFKASNILLDENYNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEIITGRRVIDNSRPSEEQNLVIWAQPLLKDRKKFTQMADPLLENKYPIKSLYQALAVAAMCLQEEADTRPLISDVVTALEFLAKKKDDDGEKVSKDQSFSSQSESDNGNNESNEVKNDDDNDDDEEEEDEDGDDDDDDDDDDEDDDGDSHNNKVKITRRHSQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4198 433 PANTHER RECEPTOR SERINE/THREONINE KINASE 2 370 - -
Tpr3g4198 433 MobiDBLite consensus disorder prediction 358 433 - -
Tpr3g4198 433 Gene3D Phosphorylase Kinase; domain 1 61 152 - -
Tpr3g4198 433 SUPERFAMILY ARM repeat 346 419 IPR016024 -
Tpr3g4198 433 PANTHER OS07G0668900 PROTEIN 2 370 - -
Tpr3g4198 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tpr3g4198 433 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Tpr3g4198 433 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4198 433 MobiDBLite consensus disorder prediction 367 381 - -
Tpr3g4198 433 SUPERFAMILY Protein kinase-like (PK-like) 62 358 IPR011009 -
Tpr3g4198 433 Pfam Protein kinase domain 77 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4198 433 Gene3D Transferase(Phosphotransferase) domain 1 153 379 - -
Tpr3g4198 433 CDD STKc_IRAK 82 351 - -
Tpr3g4198 433 MobiDBLite consensus disorder prediction 387 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4198 Tpr-Chr3 46663715 46666538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4198 58 358 Glycoside Hydrolase AT3G07070 71.096 1.89e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr3g4198 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4198 - - cam:101510927 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4198 3 46663715 46666538 Tpr4g3258 4 38623551 38626686 PCT