Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4177 ATGAGTGTGATAGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTGGCAAAGCATCGTGGGATTGATGTTTTGTTGAATGATGAATCCAAACGGGAAACTCCTGCTGTTGTCTGTTTTGGCGAGAAGCAGCGGTTTTTAGGGTCTGCTGGTTCTGCTTCTGCTATGATGCACCCGAAGACAACGATATCTCAAGTGAAGAGATTTATAGGTAGGAAATTTCGTGACCCTGATATGGAAAGGGATCTGAAAATGCTCCCTCTTGAAACTTCTGAAGGCCCAGATGGTGGTGTTTTGATTCATTTGAAATACATGGAGGGGACTCATACGTTTACACCGGTTCAAATAATGTCTATGCTTTTTGCTCACTTGAAGACTATGACGGAAAAGGATTTGGAGGCACCCATCTCGGATTGTGTTATTGGTATCCCATCGTACTTCACCGACTTGCAGAGACGGGCATATCTTGATGCGGCAAAAATTGCTGGGTTGAAGCCTTTGAGATTGATACATGATTGTACTGCAACTGCCCTTAGTTATGGAATTTACAAAACAAATTTTCAAAATGATAGTTCAACTTATGTTGCATTTATTGACATTGGTCACTGCGATACTCAAGTCTGCATTGCAGCATTCGAGTTCGGACAAATGAAGATACTTTCACATGCTTTTGATAGGAGCTTAGGTGGGAGGGACTTTGACGAGGTTCTATTTACTCATTTTGCTGAAAAATTCAAGGAACAGTACAGCATTGACGTGTATTCTAATGCCAAGGCATGTATTAGGCTCCGTGCAGCATGTGAGAAACTGAAGAAAGTTTTGAGTGCGAATCCAGAGGCACCGCTAAATATTGAGTGTTTGATGGATGAAAAAGATGTTAAGGGTTTTATCACTAGAGAAGAATTTGAGAATCTCGCATCGGGATTATTGGAGAGAATTTCTGAACCTTGCAATAAAGCATTAGTTGAAGCAGGCTTGGTTGCAGAGAAGATTGCTTCTGTAGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCAGTAAGCACGTTAGTATCTTCTCTATTCAAGAGAGAACCCAGCCGAAAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAATGTGCTATGCTCAGTCCCACATATCGTGTGAGAGAATACGAGGTCCAGGATATTAGTCCTTTTTCATATGGACTTTTATCAGATGAAGGTCCAATTTCGGCAGGACCAAATGGTGTAATTGTCCCAAAAGGCCAACCCATTCCAAGTACTATAGTCCTACGACTCCAGCGAAATAATTTGTTCTATTTGGAAGCTTTCTATGCAAATCCACAAGAACTACCACCTGGAACAGATCCCAAAATTAGTTGCTTCACGATTGGTCCTTTGCTTGGATCTCAAGGTAGTAAGACAAGAGTTAAAGTTCGAGTTCAACTAAATCTGCATGGGATTTTCAGTATTGAGTCAGCTAGAATGATCAAGGATCATGCGGATGATCATGATTCAAATTTAGTTGCTATGGATGTTGATCCCGTGCCTGAGAACTCTGAGAACTCAGATAGTACCAATTTTGTTGCCAATGGCGCTGAAGATAGTACCAATAAGTGTGATCCTCCACAAAATTCTGCTGATCATTCAAGAAAAGATAAAGCTAACAGAAGGATTCCTATTCCAGTGAATGAGAATATCTATGGTGGAATGACAACGGCAGAAATTTCTGAAGCTCGTGATAAAGAACTCCAGTTAGCCCAACAGGACAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACCTTGGAGTCCTATGTCTATGAGACGAGGAGTAAGCTCTTCAACACTTATCGGAGCTTTGCAAGTGAGCCAGAGAGGAATGACATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTATGAGGATGGTGATGATGAAACCGAACATGCTTATACCTCAAAATTGGAAGATCTGAAAAAGCTGGTGGATCCAATTGAGAATCGGTACAAAGATGATGAAGAAAGAGCGCAAGCTATAAAAGATTTATCAACACTCATTTCAAATATTCACACGTTTTCAGATTCCCTTCCACTCCAGTATAAAGAATATCTCATCGATGAGACTAATAAAGCAGAACAGTGGCTAACAGAGAAGGTGCAACAACAAGATTCTTATCCTAAGAATATTGATCCGATATTCTGGTCAAGTGATATTAAGAGAGCATCACATCATCTCCAACAAGTTTGGGAAAGGATAGCGTCATCTAGGAGAACTTCCGAAGACAATGACAAAGACAAGATGGATAGTTCCAACGATTCATGA 2322 0.4104 MSVIGFDIGNENCVIAVAKHRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGSASAMMHPKTTISQVKRFIGRKFRDPDMERDLKMLPLETSEGPDGGVLIHLKYMEGTHTFTPVQIMSMLFAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGIYKTNFQNDSSTYVAFIDIGHCDTQVCIAAFEFGQMKILSHAFDRSLGGRDFDEVLFTHFAEKFKEQYSIDVYSNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFENLASGLLERISEPCNKALVEAGLVAEKIASVELVGSGSRIPAVSTLVSSLFKREPSRKLNASECVARGCALQCAMLSPTYRVREYEVQDISPFSYGLLSDEGPISAGPNGVIVPKGQPIPSTIVLRLQRNNLFYLEAFYANPQELPPGTDPKISCFTIGPLLGSQGSKTRVKVRVQLNLHGIFSIESARMIKDHADDHDSNLVAMDVDPVPENSENSDSTNFVANGAEDSTNKCDPPQNSADHSRKDKANRRIPIPVNENIYGGMTTAEISEARDKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRSFASEPERNDISRSLQETEDWLYEDGDDETEHAYTSKLEDLKKLVDPIENRYKDDEERAQAIKDLSTLISNIHTFSDSLPLQYKEYLIDETNKAEQWLTEKVQQQDSYPKNIDPIFWSSDIKRASHHLQQVWERIASSRRTSEDNDKDKMDSSNDS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4177 773 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Tpr3g4177 773 MobiDBLite consensus disorder prediction 752 773 - -
Tpr3g4177 773 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 571 669 IPR029048 -
Tpr3g4177 773 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Tpr3g4177 773 CDD HSPA4_like_NDB 2 381 - -
Tpr3g4177 773 Gene3D - 38 113 - -
Tpr3g4177 773 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 771 - -
Tpr3g4177 773 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 564 IPR029047 -
Tpr3g4177 773 Gene3D - 186 360 - -
Tpr3g4177 773 Gene3D Actin; Chain A, domain 4 230 313 - -
Tpr3g4177 773 MobiDBLite consensus disorder prediction 531 556 - -
Tpr3g4177 773 Gene3D - 569 680 IPR029048 -
Tpr3g4177 773 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 602 IPR029047 -
Tpr3g4177 773 Coils Coil 655 675 - -
Tpr3g4177 773 Pfam Hsp70 protein 3 669 IPR013126 GO:0005524|GO:0140662
Tpr3g4177 773 Gene3D - 5 374 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 2 15 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 30 42 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 140 160 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 332 348 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 363 383 - -
Tpr3g4177 773 PRINTS 70kDa heat shock protein signature 388 407 - -
Tpr3g4177 773 MobiDBLite consensus disorder prediction 754 773 - -
Tpr3g4177 773 PANTHER HSC70CB, ISOFORM G-RELATED 1 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4177 Tpr-Chr3 46468212 46476349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4177 2 665 Miscellaneous Gene Families AT5G28540 28.955 1.45e-75 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4177 K09489 - gmx:100808218 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4177 3 46468212 46476349 Tpr4g0010 4 109219 113197 PCT