Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4163 ATGTGTGACACTATACTTTCCTGTGCTCGTGATAACTTACTTCCACTAGCCCGTGAGCATTTGCTTCCAATATTAAGGGAAGCAGTGGATATGATTAGAGGTGTACCAAAAGAAATTGAAGAAATGAAAGATGAACTTGAAAGCATTGAAGAATTCATCAACAAAGCAGATAAAATGGTTGATGATGCTGAAGATGACAAAACAAGTCACCAAATCAAAGAAAGAATCAAGCAGCTAAAAGAAGCATCCTTTCACATAGAAGATATCATTGATGAATATATGATCTGCGAGGAACAACCTACAGGATGTACTGCTGGTGCTAACTTAGTCAAAACTATGATTCTTCGTCTCGAAATAGCCTACAAGATTCAGAACATCAAATCCCAAATTAGTGAAATGAAAGATGCAAGTTCTGAAAAAGATTATGGCTTCCAGTTCCATATTCAATCTTTTTCAGAACATGGATCAAGCAGTTCTGCAGCCAACTCAAACGCTGCGTTATTGCAGAATCTTCGAAGGGCTCCATTTTACATGGATGAAGCTGATGTCGTAGGCTTTGAAATGCCGAGAGACATATTGATTGATTTGTTGTTAGAGGGAAGACCGGAGCTCACTGTTGTTTCCGTTGTTGGAATGGGAGGACAGGGAAAAACCACTCTAGCCAAGAAAGTTTTTGACAACAACAAGATTGTTAAACACTTTCACTGTCATGTATGGATTACCGTGTCTCAATCATACGATATAGAAGGATTGCTGAGGGACTTGTTGCGCGAGATTTACAAACAACAAGGAGTCAATCCTCCTCAGAGTATTCATCAAATGAATCGAGAGTCGTTAGTTGATGAAGTAAGAAACTACTTGCAGGAAAAAAGGTATGTTGTAGTGTTTGATGATGTATGGAATTTAAATTTTTGGGATGATATTGAATTTGCTATGATTGATAACAAAAATGGTAGTAAGATTTTAATCACAACAAGAAAGATGAATGTTGTGAATGCTTGTAAGAAATCTTCTTTTGTTGAAGTGCATGAACTAAAAGGTTTAACTAAAGAACAATCTTTGGAGTTGTTCAATAAGAAGGCATTCCGCGACTTGAATGGATGTTGTCCGGAAAATCTTATTGAAATATCTTCTAAAATTGTTGAAAAATGCAATGGATTACCACTAGCAATTGTAGTCACCGGGGGTCTTCTATCTTGCAAAGATAGAAATACATTTACATGGTACAAGTTTAGTGAAAATCTAAATTCAGAGTTAAAGGAAGATTCCAAGATAAAAAGAATTTTAGGTCTTAGTTACCATGATTTGCCTTACAATCTCAAGTCATGTTTGTTGTATTTTGGATTATATCCTGAAGATTGTGTAGTTCCTTCGAAGATATTGATTTGGCGATGGGTGGCTGAAGGGTTCTTGAAAAAGGAAAGGGGAAAGACTTTGGAAGAGGTTGCAGAAGGATATTTAACAGAATTGATCCGTAGAAGTTTGGTGCAAGTAGTTTCAGTCAGAAATGAAAGAGTAAAAAGTTGTCGTGTTCATGATATGGTGCATGCAATGATCCTTGAAAAATGTGAGGATTTATGCTTTTGCAAGTATATTGGTAAGAACGAACAATCATCTTTAATTGGAATGGTTCGACGTCTATCAATAGAAAGTGGTGCTGATAATATAATGGAAAGTATTGAAAACTCACATGTTCGATCACTACTTGTTTTCAGTCCTAAAACATTACCTGAATCCTTTGCAAGGAGAATCCCTACAAAATACAAGAGGTTGAAGGTGCTTGCTTTGGAGTATGCTGGATTGCTTGAAGTTCCTAAAGATTTGGGAAGTTTGAGCCACTTGAAGTATTTTAGGTTTCGGGACACACATCCAGAAGCTAGACGTTATACACTACCAAAATCCATTTGCATGCTCGAGAGCCTAGAGACCTTGGATTTGACAGGTACAATGTTCTATGCTATGCCGAAGGAGATTTGCAAGCTCAGAAAGTTACGTCATTTTCTAGGCTCGAGTATGTCTTTGATTCAATTGAAGGATGGTATTGCAGGTATGACATGCCTACAAACTCTACGTGAAGTTTATTTAAATGAAGGTGAAAATGAAAACGATAGTAGAGTAGTAGAGCTAATCCAAGAGCTAGGAAAGCTAAAACAGCTAAGGGAATTGGTCTTGCTCGGTGTTAGGGGTAAATATATGAGTGCTATATCTTCCTCGATCAATGAGATGCAACAAATGGAGAAACTATATATTCGCACAATCAGAGTTGACACAGTCATCAATATGAATTTGAATTCACCCCTACTTATGCTTCGAAATCTCAGACTTGAGGGGAAGTTAGAGAAGTTGTCTGAGTGGATTCCAAAACTTCAAAATCTTGTTAAGCTGACTATGGTACTTAAATATTCCAAGCTAACAGGTGATGTAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTACCTATATGTCTCCAACTGTGATTATGAAGACAAATTCAAAAGCTTACATTTTCAAGATGGATGGTTTAAGAATTTGAAGGAACTATATCTTCATAATTTTGATAACTTGAGTTACATCCATATTGACGAAGGTGCGTTGTGTTCTCTACAAAAGTTCCAACTATCCTCAATCCCTCAACTCAAGACATTACCAATTGGCATTCAACACTTACAAAAGCTCGATTTTCTCTGTATTTTGAGTATGTGTGTGGAATTTATGGAGAGCATTTCTCCAGATGAAGGAAAAGAGCATTGGATCTTCAAGCAAGTGCCCTTTGTAGAAATTTCTGGAGGATCAGGAGCTATAAAGCATACACTATCCAACTTCGAGAGAAAAAAAAGGTGA 2844 0.3678 MCDTILSCARDNLLPLAREHLLPILREAVDMIRGVPKEIEEMKDELESIEEFINKADKMVDDAEDDKTSHQIKERIKQLKEASFHIEDIIDEYMICEEQPTGCTAGANLVKTMILRLEIAYKIQNIKSQISEMKDASSEKDYGFQFHIQSFSEHGSSSSAANSNAALLQNLRRAPFYMDEADVVGFEMPRDILIDLLLEGRPELTVVSVVGMGGQGKTTLAKKVFDNNKIVKHFHCHVWITVSQSYDIEGLLRDLLREIYKQQGVNPPQSIHQMNRESLVDEVRNYLQEKRYVVVFDDVWNLNFWDDIEFAMIDNKNGSKILITTRKMNVVNACKKSSFVEVHELKGLTKEQSLELFNKKAFRDLNGCCPENLIEISSKIVEKCNGLPLAIVVTGGLLSCKDRNTFTWYKFSENLNSELKEDSKIKRILGLSYHDLPYNLKSCLLYFGLYPEDCVVPSKILIWRWVAEGFLKKERGKTLEEVAEGYLTELIRRSLVQVVSVRNERVKSCRVHDMVHAMILEKCEDLCFCKYIGKNEQSSLIGMVRRLSIESGADNIMESIENSHVRSLLVFSPKTLPESFARRIPTKYKRLKVLALEYAGLLEVPKDLGSLSHLKYFRFRDTHPEARRYTLPKSICMLESLETLDLTGTMFYAMPKEICKLRKLRHFLGSSMSLIQLKDGIAGMTCLQTLREVYLNEGENENDSRVVELIQELGKLKQLRELVLLGVRGKYMSAISSSINEMQQMEKLYIRTIRVDTVINMNLNSPLLMLRNLRLEGKLEKLSEWIPKLQNLVKLTMVLKYSKLTGDVMKLLKSMPNLLYLYVSNCDYEDKFKSLHFQDGWFKNLKELYLHNFDNLSYIHIDEGALCSLQKFQLSSIPQLKTLPIGIQHLQKLDFLCILSMCVEFMESISPDEGKEHWIFKQVPFVEISGGSGAIKHTLSNFERKKR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4163 947 Gene3D - 433 523 IPR036388 -
Tpr3g4163 947 Gene3D - 16 134 - -
Tpr3g4163 947 Gene3D Ribonuclease Inhibitor 549 914 IPR032675 -
Tpr3g4163 947 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Tpr3g4163 947 Gene3D - 347 432 IPR042197 -
Tpr3g4163 947 SUPERFAMILY L domain-like 510 904 - -
Tpr3g4163 947 Gene3D - 177 342 IPR027417 -
Tpr3g4163 947 PANTHER DISEASE RESISTANCE PROTEIN RP 38 896 IPR044974 GO:0006952
Tpr3g4163 947 Coils Coil 39 66 - -
Tpr3g4163 947 Pfam Rx N-terminal domain 19 99 IPR041118 -
Tpr3g4163 947 PRINTS Disease resistance protein signature 206 221 - -
Tpr3g4163 947 PRINTS Disease resistance protein signature 286 300 - -
Tpr3g4163 947 PRINTS Disease resistance protein signature 384 398 - -
Tpr3g4163 947 PRINTS Disease resistance protein signature 636 652 - -
Tpr3g4163 947 PANTHER - 38 896 - -
Tpr3g4163 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 447 IPR027417 -
Tpr3g4163 947 CDD RX-CC_like 19 135 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4163 Tpr-Chr3 46259205 46262564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4163 194 403 WRKY Transcription Factor Family AT5G45050 27.962 4.49e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4163 K13457 - gmx:100819372 814.298