Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4162 ATGGGTTGTTTTCTAAGTAAAGACAAAGATTCAGAACCAGAACATCACAATGGTTATAGATATGCTGAATCTTCTGGTCTTAGGAACAACCATGATCAACAAGTCAACCAATCAAGAACACCACCACCTAGTACTTCATCTTATCAACCTCAAATACCATTGAAACCTTCATCAAATTCAGCTCCAAGTCCAAAACCTGTTATAAAACAAGACACAAACACAATCCTAGGAAAAAGTTTTGAAGATGTGAAACAATTCTACACACTTGGTAAAGAATTGGGTAGAGGTCAATTTGGAGTAACATATCTATGTACTGAAAATTCAACAAAATTGCTTTATGCTTGTAAATCAATTTCAAAGAGGAAACTTGTGAGTAAATCTGATAGAGAAGATATAAAAAGAGAAATTCAGATTATGCAACATTTAAGTGGTCAACCAAATATAGTTGAATTTAAAGGAGCTTATGAAGATAGAAATTCAGTTCATGTTGTTATGGAACTTTGTGCTGGTGGTGAACTTTTTGATAGGATTATTGCTAAAGGACATTATAGTGAAAAAGCAGCTGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATTTGTCATTTTATGGGTGTTATGCATAGGGATCTCAAGCCAGAGAATTTCTTGTTGTCTAGTAAAGATGAAAATGCACTTCTTAAAGCAACTGATTTTGGTTTGTCTGTTTTTATTGAAGAAGGAAAGGTGTACCGTGATATAGTTGGAAGTGCTTATTATGTTGCCCCAGAAGTTCTTCGTCGCAGATGCGGAAAAGAAATCGATATATGGAGTGCAGGAGTAATATTATATATCTTACTTAGTGGTGTCCCTCCATTTTGGGCTGAGACTGAAAAGGGAATATTTGATGCCATATTGGAAGGTCATATTGATTTTGACAGTGATCCATGGCCTAAAATATCGGACAGCGCCAAGGATCTTGTTCGTAAAATGCTTATACAGGATCCGAAGAAACGCATTACTTCCGCACAGGTTCTAGAGCATCCATGGATTAAAGGTGGAAATGCTTCTGATAAGCCAATAGACAGCGCTGTTCTTTCTAGAATGAAGCAATTTAGAGCTATGAATAAACTTAAGAAACTTGCATTGAAGGTCATTGCTGAGAATATGTCTGAAGAAGAGATCCGAGGTTTGAAGGCGATGTTTACAAATATGGACACAGACAACAGTGGTACAATTACCTATGAAGAACTAAAAGCAGGATTGCAAAGACTTGGCTCAAAGCTATCAGAGGCTGAAGTTAAACAACTTATGGAAGCTGCTGATGTAGATGGAAATGGCACAATTGATTGCATTGAATTCATGACTGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCATCTTTACAAGGCCTTCCAATATTTCGATAAAGACAGCAGTGGGTTTATTACAAGAGATGAACTGGAAACTGCCATGAAAGAATATGGTATGGGAGATGATGCCACAATCAAAGAAATTATATCCGAAGTCGATACAATTATATCTGAAGTGGACACAGATCACGATGGTAGAATCAACTATGAAGAATTCTGTGCAATGATGAGGAGTGGAAACCAACAAGTTAAGCTATTCTAA 1623 0.3635 MGCFLSKDKDSEPEHHNGYRYAESSGLRNNHDQQVNQSRTPPPSTSSYQPQIPLKPSSNSAPSPKPVIKQDTNTILGKSFEDVKQFYTLGKELGRGQFGVTYLCTENSTKLLYACKSISKRKLVSKSDREDIKREIQIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSEKAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFDSDPWPKISDSAKDLVRKMLIQDPKKRITSAQVLEHPWIKGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSEEEIRGLKAMFTNMDTDNSGTITYEELKAGLQRLGSKLSEAEVKQLMEAADVDGNGTIDCIEFMTATMHRHKLERDDHLYKAFQYFDKDSSGFITRDELETAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQVKLF* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4162 540 SUPERFAMILY EF-hand 384 532 IPR011992 -
Tpr3g4162 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tpr3g4162 540 Coils Coil 409 429 - -
Tpr3g4162 540 MobiDBLite consensus disorder prediction 7 21 - -
Tpr3g4162 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 535 - -
Tpr3g4162 540 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4162 540 CDD STKc_CAMK 86 344 - -
Tpr3g4162 540 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4162 540 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Tpr3g4162 540 SMART efh_1 463 491 IPR002048 GO:0005509
Tpr3g4162 540 SMART efh_1 505 533 IPR002048 GO:0005509
Tpr3g4162 540 SMART efh_1 391 419 IPR002048 GO:0005509
Tpr3g4162 540 SMART efh_1 427 455 IPR002048 GO:0005509
Tpr3g4162 540 Pfam EF-hand domain pair 462 531 IPR002048 GO:0005509
Tpr3g4162 540 Pfam EF-hand domain pair 392 452 IPR002048 GO:0005509
Tpr3g4162 540 Gene3D Transferase(Phosphotransferase) domain 1 173 351 - -
Tpr3g4162 540 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Tpr3g4162 540 Gene3D Phosphorylase Kinase; domain 1 89 172 - -
Tpr3g4162 540 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Tpr3g4162 540 ProSiteProfiles EF-hand calcium-binding domain profile. 387 422 IPR002048 GO:0005509
Tpr3g4162 540 ProSitePatterns EF-hand calcium-binding domain. 400 412 IPR018247 -
Tpr3g4162 540 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4162 540 ProSitePatterns EF-hand calcium-binding domain. 436 448 IPR018247 -
Tpr3g4162 540 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 46 535 - -
Tpr3g4162 540 MobiDBLite consensus disorder prediction 1 66 - -
Tpr3g4162 540 SUPERFAMILY Protein kinase-like (PK-like) 86 364 IPR011009 -
Tpr3g4162 540 CDD EFh 466 531 IPR002048 GO:0005509
Tpr3g4162 540 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Tpr3g4162 540 MobiDBLite consensus disorder prediction 23 66 - -
Tpr3g4162 540 ProSiteProfiles EF-hand calcium-binding domain profile. 501 536 IPR002048 GO:0005509
Tpr3g4162 540 ProSiteProfiles EF-hand calcium-binding domain profile. 423 458 IPR002048 GO:0005509
Tpr3g4162 540 Gene3D - 352 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4162 Tpr-Chr3 46244432 46249404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4162 34 540 EF-hand Containing Proteins AT3G20410 75.614 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr3g4162 Pkinase 4.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4162 K13412 - gmx:547888 912.524