Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4155 ATGTTTTCCACCACTCTCACAAATGGGTTCCCCTCAAAATCCAACCTTTCTCCAAAAACCCGTTTCCCCCAATTCCAAATCCGCTCCGGAATCCGCGAAATCCGAGAACGAATCAACACCGTCAAAACCACCCAAAAAATCACCGAAGCAATGAAACTAGTCGCCGCCGCCAGAGTCCGCCGTGCACAAGAAGCCGTAATCAACGGCCGACCTTTCTCGGAAGCCTTCGCTGAAGTTCTCCAAAACATCAACCAAAATCTCCAAAACGACGACGTTGAAGTCCCTTTAACCGCGGTTCGACCGGTAAAAAACGTTGCTTTAGTTGTCATCACCGGTGACCGTGGCTTATGCGGCGGTTTCAATAATACCGTTGCGAAAAAAGCCGAAGCAAGAGTTCATGAATTGAAGAAACTAGGTATAGGTTGTGTTGTTATAAGTGTTGGTAAAAAGGGTAATTCTTATTTTAAACGTAGGAGTTTTGTTGAAGTTGATAGATTTATTGAAAATTCGGGTTTTCCGACAACAAAAGATGCTCAAATTATTGCTGATGATGTTTTTTCATTGTTTGTTAGTGAAGAAGTTGATAAAGTTGAACTTGTTTATACAAAATTTGTATCTTTAGTTAGGTTTAATCCAGTGATACAAACATTGTTACCATTATCTAAAAAAGGTGAAGTTTTTGATGTTAATGGGAATTGTGTTGATGCAATGGAAGATGAGTTTTTTAGGTTAACTTCAAAAGATGGAAAATTGGCATTGAAAAGAGATAATTTTGTTGCGACGAAGAAGAAAACAAATGATGGGTGTGTTCCACTTATGGAATTTGAACAAGATCCTGCTCAGATTCTTGATGCAATGATGCCACTTTATCTGAATAGTCAAGTTTTGAAAGCATTGCAAGAATCATTGGCTAGTGAACTTGCTGCTAGAATGGGTGCTATGTCTAATGCAACTGATAATGCTGTTGAGTTGACGAAAGAGCTTTCTATTGCTTATAATCGAGAAAGACAAGCTAAGATTACTGGTGAGATTTTGGAGATTGTGGCCGGAGCTGAGGCGTTGAAACCGATTGATTGA 1077 0.3955 MFSTTLTNGFPSKSNLSPKTRFPQFQIRSGIREIRERINTVKTTQKITEAMKLVAAARVRRAQEAVINGRPFSEAFAEVLQNINQNLQNDDVEVPLTAVRPVKNVALVVITGDRGLCGGFNNTVAKKAEARVHELKKLGIGCVVISVGKKGNSYFKRRSFVEVDRFIENSGFPTTKDAQIIADDVFSLFVSEEVDKVELVYTKFVSLVRFNPVIQTLLPLSKKGEVFDVNGNCVDAMEDEFFRLTSKDGKLALKRDNFVATKKKTNDGCVPLMEFEQDPAQILDAMMPLYLNSQVLKALQESLASELAARMGAMSNATDNAVELTKELSIAYNRERQAKITGEILEIVAGAEALKPID* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4155 358 PRINTS ATP synthase gamma subunit signature 102 121 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 PRINTS ATP synthase gamma subunit signature 195 212 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 PRINTS ATP synthase gamma subunit signature 301 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 PRINTS ATP synthase gamma subunit signature 332 353 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 Gene3D ATP synthase, gamma subunit, helix hairpin domain 30 96 - -
Tpr3g4155 358 Hamap ATP synthase gamma chain [atpG]. 28 354 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 ProSitePatterns ATP synthase gamma subunit signature. 340 353 IPR023632 -
Tpr3g4155 358 Pfam ATP synthase 31 354 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 PANTHER ATP SYNTHASE GAMMA CHAIN 24 358 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 30 354 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 32 354 IPR035968 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 CDD F1-ATPase_gamma 31 351 IPR000131 GO:0015986|GO:0045261|GO:0046933
Tpr3g4155 358 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g4155 358 Gene3D ATP synthase, gamma subunit, helix hairpin domain 252 354 - -
Tpr3g4155 358 Gene3D - 97 222 - -
Tpr3g4155 358 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 24 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4155 Tpr-Chr3 46128453 46129853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4155 16 355 Primary Pumps ATPases AT1G15700 71.848 3.93e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4155 K02115 - qsu:112000322 470.314