Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4142 ATGAATAAGATTTTTGTTTGGTATCATCGGGTTGTCGTGTTCTTGTTGCTTACAAGGGTTTGTTTAACGTCACCACTTCCACACACTGATAATGGTCAAGTAGATTCAAATGCTGCAAGAAATCTGAATCAGGAGCAGGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATAATTCAAGAGTATTTAACGCCATTTGTGGAGAAAGAAAAATATAATATCTCAAGAAAGTGCAGGCTTCATCCTGACAATGATATATACAGAGATCAGGAACAACATAAATCTCATATAGATATAAATGAATGGAAGTGTGGATACTGTAAGAAAACTTTCTATGAAGAGAAGAATCTTGATCAGCATTTTGACAACAGACACTCCAATTTACTTAATTTGAATGAAAGCAAATGCTTGGCAGATATATGTGGAGCACTGCACTGTGACCATGAGATTAATTCCGGATCAAAAAAATCTAAGTGCAATCCTGCTGCTGCTGCTAGAAATAAACATTTGTGTGAGAACTTAGCCGATAGCTGTTTTCCTGTTAGCCATGGTCCTGCAGCAAGCCGGCTTCATGAATTCTTCTTGCATCAATTCTGTGACGCTCACAGCTGCACTGGAAGTAAGCCTTTCTCCAGAGGGCGCAGGAAAAAGACAAATGTGTTCTACATAGTTGCCTCTATTTTTCTTGTGACACTGCTGTTACTTTACTATCTCTACATTTATTTATATCAGAGAGGATTAAAAAGGGAAACTCAAATGCTGAAGCGGATATCACAAGCCGGCCGAAAAAAGAAGCCATCATAA 822 0.3808 MNKIFVWYHRVVVFLLLTRVCLTSPLPHTDNGQVDSNAARNLNQEQGDHQIHCSRERSRIAWKIIQEYLTPFVEKEKYNISRKCRLHPDNDIYRDQEQHKSHIDINEWKCGYCKKTFYEEKNLDQHFDNRHSNLLNLNESKCLADICGALHCDHEINSGSKKSKCNPAAAARNKHLCENLADSCFPVSHGPAASRLHEFFLHQFCDAHSCTGSKPFSRGRRKKTNVFYIVASIFLVTLLLLYYLYIYLYQRGLKRETQMLKRISQAGRKKKPS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4142 273 ProSitePatterns Zinc finger C2H2 type domain signature. 110 131 IPR013087 -
Tpr3g4142 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 133 IPR013087 -
Tpr3g4142 273 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 273 - -
Tpr3g4142 273 PANTHER ZINC FINGER PROTEIN-RELATED 11 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4142 Tpr-Chr3 46038708 46042829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4142 32 273 C2H2 Transcription Factor Family AT5G63280 60.976 9.93e-107 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g4142 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4142 - - lang:109338698 458.759