Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4131 ATGTCTAACTTACCCCAATCCGTGTCAATGAACTCTGAATTCGGTGCTCAACATCCTCCTCCTCCTTGTCTCGCTGCTGCGTCCTCTCAATCTTCCCCTTACAACAGAGATCATAAGATGGCTTCTTCTGAACAACTCGTTTTCGAACTCAGTAACCCTGAGCTCCGTGAAAACGCTCTTCTCGAACTCTCCAAGAAGAGAGAGCAATTCCAAGATCTAGCTCCATTGCTATGGAATTCATTTGGCACTATTGCAGCACTTTTGCAGGAAATAGTGTCAATATACCCTGTATTGTCACCTCCCAATCTCTCTCCTGCACAATCGAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCTTCTCATCCTGATACAAGGATGCTATTCCTGAATGCTCATATTCCGCTGTATCTGTATCCCTTCCTGAACACCACAAGCAAGTCAAGACCTTTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATCGGTGCATTGGTGAAGGTTGATGATACCGAGGTTATTAGTTTTCTGCTTTCGACTGAAATAATTCCCCTGTGCCTGCGTACCATGGAAATGGGGAGTGAGCTCTCCAAAACTGTTGCGACATTCATTGTTCAAAAGATTCTGTTGGACGATCTGGGCTTGGACTACATTTGTACCACAGCTGAGCGCTTTTTCGCTGTAGGTCGAGTTCTTGGAAACATGGTGGCAGCTCTTGCTGACATACCATCATCTCGTCTGTTGAAGCATATCATTCGATGCTATCTTCGCCTGTCAGATAACCTAAGGGCTTGTGATGCATTAAGAAGCTGTCTTCCAGACATGTTAAGGGACGCTACTTTTAGCAGCTGCCTTCGTGAGGACCCCACAACTAGGAAGTGGCTGCAACAATTGCTTCACAATGTTGGAGGGAATCGGGTTCCTGCATTACAAGGCGGTGGAGGCTTCGATCATCTAATGGTGAATTGA 975 0.4615 MSNLPQSVSMNSEFGAQHPPPPCLAAASSQSSPYNRDHKMASSEQLVFELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDLGLDYICTTAERFFAVGRVLGNMVAALADIPSSRLLKHIIRCYLRLSDNLRACDALRSCLPDMLRDATFSSCLREDPTTRKWLQQLLHNVGGNRVPALQGGGGFDHLMVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4131 324 SUPERFAMILY ARM repeat 51 272 IPR016024 -
Tpr3g4131 324 PANTHER BNAA05G20110D PROTEIN 1 321 - -
Tpr3g4131 324 MobiDBLite consensus disorder prediction 1 36 - -
Tpr3g4131 324 Pfam Cell differentiation family, Rcd1-like 46 304 - -
Tpr3g4131 324 Gene3D - 35 305 IPR011989 -
Tpr3g4131 324 PANTHER UNCHARACTERIZED 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4131 Tpr-Chr3 45865398 45872216 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tpr3g4131 Rcd1 1.2e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4131 K12606 - gmx:100792784 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4131 3 45865398 45872216 Tpr4g0006 4 63269 73016 PCT