Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4128 ATGATGGCAGATGTGATTGCGAATATGATTGTGATTGTTGTGACCGTTGCAACTGCAGTGGCGGCGGCTATATATTTGGCAAGACCTATCCTTAGGCAATATCTTTTCCCCAAGCAAATGATAAAGGCAATTGGAAAATTCATAGGCAATATTCAACCATTTTCTCGTCTTGATTCACTACCAGGTATTCAGTATCAGGCTGCATCTGAGGACTTCATTTATTTTGGATCAAGAAAACAGGCTTATGATGAACTCTTTAAGGCACTGAATGATGATTCCGTCCATATGATAGGATTGTATGGAGAGGGTGGATGTGGGAAAACAACTCTTGTTACTCAAGTTGGCAAGCAGGCTGAGGATCGGAAAATGTTTGATAAGGTTATATTAATCACTGTGACTCAAACTCCAAATATTAGAGCCATTCAAGGAGAAATTGCGGATATGTTAAAATTGAAACTGGAGAAACATAGTGAGAATGGAAGAGCACAAGAATTATGGCTGTGTTTAAATTCAAAACAAAAGAAGCGAATTCTTTTCATAGTAAACAATTTATGGGGAAAGTTTAAATTGATGGATATCGGGATTCTATTAGATGATGATATCAAGAAAACTTTGAAGATCCTCATAACCACACCTGATGAGCGTGTTTGTACATCAATGAAATGTCAAAAGAAGATTCATTTGGAGCTCTTGTCCGAGGATGAGTCTTGGAATTTATTCCAAACGTTTGCAGAAATTGATGACCAACGCTCCACGGTATTGAAAGATGTGCCACGACAAATATGCAATGCATCTATGGGACTTCCCTTAGCAATCAAAATTGTGGGGTCATTATTCAATGAAAGGGAGGATATTGAGTGGCAGCAGGCGTATGAGAAGTTAGTGGATTCAAAGGCATCTGATGACGAAGATAAAGCAACTTCTTGCCTTCCATCTACTAAATTAAGCTATGATCATTTGCCAACACGAGCAAAAAAAATCTTTCTATTGTGTGCTCTTTTTCCAGAAGAATATCGCATCCCATCAGAAGATTTGGTGAGATATGCACATGGACTAAGTACGAATGAAAGATCATCGTTAGAGTTAATGAGGAGCTCGATGGAGGCAACCATAAATACACTTCTAAAATCTTGTTTGGTGACACGTAGTTCTGTGAAGATGCATAACATAGTTCGTGATGCAGCCTTATGGATTGCAAATAGAACAGATGATTGCAAAATCTTGGTAAATGTTGACAAACCGCTTAGCACTGTGGCAGAGGATAACAGAATAAGAGATTGTTTTGCAGTATCTTCATGGTGGTTTAATGAAAATCCCTCTTTTTGTCAATTGCATGCTCCAAATCTAAAAATGCTATTGATAAATATAAGTGCTCATGGTTCATTGAATTCCTTGGATTTATCAACTTTAACATTTGAAGGAATGCAAGGGCTTCAGGTATTCTCTCTAACCATCAATTACAAAATAGTGCCAATATCATTTCCTCCATCAATCCAATTGTTGACAAATGTTCGAACTCTGCGCTTAAATGGATTGAAGCTTGGTGACATTTCTTTCATAGCAAGCTTAACAAGACTAGAGGTTCTTGACTTGCGACGTTGTTACTTCAACAAACTTCCTATCGAAATAAGAAACCTCGAAAGCCTGAAGCTGCTAGATTTGTCTCAATGTCATATTTTTCAATATTACTATAATGGAGCAATAGGAAAATGTTCACAGCTAGAGGAGTTATATGCTTCAAAATGTTACCCATATAAGTATGTCCATGAGATCATCCTGGATATTGGTATTCTCCAAAATCTACAAAGGTTTGTACTTGGTTATCCAATCACTCCAGGAAGAACTAGAGTTGTAGAACTAACTGATTTTGATATCTCAAGGTTGAGGACATCCGACAAAAATATTCTGCAAATAGCTGAGACAATTTCTTTGAAAGGCCATCGTGGAGGAAGTGCAAATATCATTCCAGATATGGTTAGATTTGTTGGAGGCATGAATAATTTGTCTACTCTTCATCTTAATGATTATGGCGGGATAGATTGCATCTTTAATACAACTTGTGATTTGAAGGAAGATGATATGATTCCCAGGTTGGTTGAGTTACGCCTTAAATCTGTATATCAATTGACAGAACTTTATCATGGTCCGCCTCTGCAAGTATTACACTTCTTTGAGAAACTAGAAGTACTTGACATAGATAATTGCCGGAGATTACACATCATATTTCCAACGCAATGTAACTTGAGAAATCTTAAGATCCTCAGCTTATCATATTGCAAGACCAATGAAGTACTCTTCTCAGAATCTATTGCTCAAAGTTTGCAGCAACTAGAACAGCTAACAATACATGGTTGCAGTGAATTGAAGCATATAATTACTGCAAGTGGAAGCGAACATGGTGGCTGTAGTACAAGTGAGGAAATAGTTCCAGCACCAATGAACTCCCATTTTTTTTTGACCAATATAAGGGATGTTAACATTTATGATTGTCAAAGATTAGAGTCGGTATTTCCTCTTTGTTATGTTGAAGGAGTTCCACAATTGCAAAAGATGCTTATATCACATGCTCCTAAGCTGGAATATGTGTTTGGTAAATGTGATCACGAACACCTTTCATCACACCAAAACCTGAACCATGGCATGCTTCCTCATTTAGAAGTTCTAAAACTGGATTATCTTGACAATCTCGTTGGGATGTGTCCAGAGAATTATCAAGCAAATTGGCCATCTCAGTCTCTGAGAATACTAACCATAGAGAATTGTCGAAAAATGGCAATACCATGGTTCAATTTGAAAGCTGGCTATCATCAGAGCCAACATCATCTGAATGAAATTTGGAGTTTCCAATGCCTTCAGTATTTAACAATGGGTAATTGTGAAGAATTGAAATGTTTGTTCTCCATGGAAACACATAGAAGCCTACCAGAGTTGATGTGCCTTCGCGTTTACGATTGTCAAGAATTGGAACAAATTGCGGCACCAAATGAAGAACTTTTGCAGCTTTCTAATGCTGCTGAATTGTATTTTCCAAAGCTGGAGCAAATAGAAGTCAAAAACTGCAACAAGCTGAAAAGTGTTTTCCCTTTTTTCATGGTTACAATGCTTCCACAATTAATCACTCTTCGCTTATCAAAAGCAACTCAACTTCAAGTGGTTTTTAGACATGGTCAAGGAGAGGACATTGTGAATAAAATGGAAATTTCTCTTCCAAACTTGACAGAAGTAACATTGGTCGATCTACCAAATTTTGTAGATATCTGCCATGGTTGTAAGTTACATGCCATTGAGCTTCTACAATTCAACATATCCAACTGCCCCAAAATTGCTCCAGGCTTAACAAAAATTCAGGATGAAACTGAAGAAGCGTCAGAAGATTCTTCTAGCATAAGTAATGATGTGGAAGACTTCATTTATTTTGTATCAAGACAAAAAGCTTATGATGAACTCTTTGAGACACTTAATGATGACTCCATCCATATGATAGGATTGTATGGAGAGAGTGGATCTGGAAAAACAACTCTTGTAACTCAAGTTGGCAAGCAGGCTGAGGATCGGAAAATGTTTGATGAGGTTATATCAATCACCGTGTCTCAAACTCCAGATATTAGAGCCATTGGAGGACAACATTTATGGATGAGTTTGAAGGAAAAGAAGCGAATTCTTATCATAGTAGACAGTTTATGGAAAGAGTTCAATTTGAAGGATATCGGGATTTACTTGGACGATTTTAATAAGGAAGCATGGAAGATCATTGTAATCACCAGTGATCAACATGTATGCACTTTGATGAATTGTCAGAAGGAGATTTATTTGGGGATCTTATCTGAAGATGAATCATGGATTTTGTTCCAGAAGCATGCACAAGTTGACGACCAGTTCTCTGATTCGATGGATGGTGTGCCGCGAAAACTTTGTGATGAATGCAAGGGACTGCCAATAACAATCAAAACTTTGGCATCATCATTAAAAGGTAAGCAAAACATTGAGTGGGAGTCGGGATTAGCTAAGCTGAGAGATTTAGAGGCATTGGAGGATCATGAAGAAAGAGTGACACATCCTTTGAATTGTCTTAAATTATGCTATGATTATTTGCCAAGGCCTGAAGTACAACTCTTACAAGTGTGTTCTCTTTATCCCCAAGAACATCACATCCCAACAGAAGATTTGATGAGGTGTGCACTTGGACTGGGTATACAATCAAACAGGAGCTTGATTCAAACACTCATAAACAAACTTTTTGAGTCAAGTAAGCAGATGCGTGGTTCCGTGAAGATAAATGACATGGTTAGGGACACAACCTTATGGATTGCAAATAGATCATATAACAACAAAATCTTGGTAAATGTTGACATGCCACTTAGCATTGTGGCAAATGATAACCGAGTAAAAGATTGTTTCGCAGTATCTTCATGGTGGTTTAATGAAAATCCCTCTTTTTGTCAATTGGATGCTCCAAATCTTAAAATGTTATTGGTAAATATCATTGCTCATAGTTCATTGAATTCCTTGGATTTATCACCTTTAACATTTGAAGGAATACAAGGGCTTGAGGTTTTCTCTCTAACCATCAATTACAAAATAGTACCAATATCATTTCCTCCATCAATCCAACTGTTGACAAATGTTCGAACTCTGCGCTTAAATGGATTGAAGCTTGGTGACATTTCTTTCATAGCAAGCTTAACAAGTCTAGAGATTCTTGACTTGCGACGTTGTGAGTTCAAAGAGCTTCCTATCGAAATAGGAAACCTTAGAAGCCTGAAGCTGCTAGATTTGTCAGAATGTCATATTTTTCAGTATTACTATAATGGAGCAATAGGAAAATGTTCACAGCTAGAGGAGTTTTATGCTTCAAAATGTTACCCTAAGTATGTCCATGAGATCATCCTGGATATTGGTATTCTCCAAAATCTACAAAGGTTTGTACTTGGTTATCCAATCACTCCAGAAAGAACTAGAGTTGTGCAAGTAAATGATTTTGATATCTCAAAGTTGAGGACATCCAACAAAAATATTCTGCAAATAGCTGAGACAATTTCTTTGAAAGGCCTCCGTGGAGGAAGTGTAAATATCATTCCAGATATGGTTGGATTTGTTGGAGGCATGAATAATTTGTCTACTCTTCATCTTACTGATTGTAGTGAGATAGAATGCATCTTTGATACAACCTGTGATTTCCAGGAAGATGAGTTGATTCCAAGGTTGGTTGAGTTACACCTTAAGTATATGTATCATTTGACAGAATTATGTCATGGTCCACCTCTGCAAGTACTACAGTTCTTTGAGAAACTAGAACTACTTGACATACATGATTGCAAGGAGTTACGCATCATATTTCCAAGGCAATGTAACTTGCAAAATCTTAAGATCCTCAGGTTATACCATTGCAAGACAGATGAAGTACTCTTCTCAGAATCTGTTGCTCAAAGTCTGCAGCAACTAGAACAACTAACAATTAGTGAATGCTTTAATTTGAAGCATTTAATTGCTTCCGGTGGATGCAAACATGGTGGTTATAATACAAGTGAGGAAATAATTCCAGCTCCAATGAACTCTCATTTTTTTATGACCAATCTAAGGGAAGTTAAGATTTCAAGTTGTCAAAGTTTAGAGTCAATATTTCCGATTTTTTATGTCGAAGGACTTCCACGATTGAAAAAGATGGATATATCGCATGCTCCTGAGCAGAAATATGTGTTTGGTGAATGTAATCATGAACGCCCTTCATCTTACCAATACCAAAACCATGTCTTACTTCCTCAATTGGAAGATCTGACACTGAGTCAACTTCCCAATCTCATTGGGATGTGTCCAGAGCATTGTCATGCTAAGTGGCCTCCTCAGTCTTTGTGGAAACTAAACATAGATAATTGTGAAAGATTGGTTACACGATGGTTCACGTTCAACGTTGGCTATGATAAAAGAACACATCATTTGAATGAAAACTCACCCGCAAAGCTGAAACATCTGAAGTTGAGTCAGTGTTTAAAAGTGACCAAATGTTATGAACTGATTTGGAGTTTCCAATGTCTTCGGCGTTTAAAAGTGACCAAATGTTATGAACTGAAATGTGTATTCTCCATGGAAACACATGGAAGCCTGCCAGAGTTGATGGAACTTTACGTTTACGAATGTAAAGAATTGGAACAAATTGTTGAAGCAAATGCTGAATTGTATTTTCCAAAGCTAAAACATATAGAAGTCAAAAAGTGCAACAAGTTGGAAAGTCTTTTCCCTCTTTCCATGGTTACAATGCTTCCACAATTAAGCACTCTTCGCTTATCAGAATCTGTTGCACTTAAAGAGGTTTTTAGACATAGTCAAAGCCACAACATTATGAATACAATGGAAATTGTTCTTCCAAACTTGAATGTGATAAGATTGTCTTCTCTACCGAATTTTGTAGACATCTGCCGTGGTTGTAAGTTACATGCCGATAAACTTCGAGAAATCGACGTATACAATTGCCCCAATTCTGCTCCAAGCTTAAAACAAATTCAGGATGAAATTAAGAGAAGATGA 6522 0.3715 MMADVIANMIVIVVTVATAVAAAIYLARPILRQYLFPKQMIKAIGKFIGNIQPFSRLDSLPGIQYQAASEDFIYFGSRKQAYDELFKALNDDSVHMIGLYGEGGCGKTTLVTQVGKQAEDRKMFDKVILITVTQTPNIRAIQGEIADMLKLKLEKHSENGRAQELWLCLNSKQKKRILFIVNNLWGKFKLMDIGILLDDDIKKTLKILITTPDERVCTSMKCQKKIHLELLSEDESWNLFQTFAEIDDQRSTVLKDVPRQICNASMGLPLAIKIVGSLFNEREDIEWQQAYEKLVDSKASDDEDKATSCLPSTKLSYDHLPTRAKKIFLLCALFPEEYRIPSEDLVRYAHGLSTNERSSLELMRSSMEATINTLLKSCLVTRSSVKMHNIVRDAALWIANRTDDCKILVNVDKPLSTVAEDNRIRDCFAVSSWWFNENPSFCQLHAPNLKMLLINISAHGSLNSLDLSTLTFEGMQGLQVFSLTINYKIVPISFPPSIQLLTNVRTLRLNGLKLGDISFIASLTRLEVLDLRRCYFNKLPIEIRNLESLKLLDLSQCHIFQYYYNGAIGKCSQLEELYASKCYPYKYVHEIILDIGILQNLQRFVLGYPITPGRTRVVELTDFDISRLRTSDKNILQIAETISLKGHRGGSANIIPDMVRFVGGMNNLSTLHLNDYGGIDCIFNTTCDLKEDDMIPRLVELRLKSVYQLTELYHGPPLQVLHFFEKLEVLDIDNCRRLHIIFPTQCNLRNLKILSLSYCKTNEVLFSESIAQSLQQLEQLTIHGCSELKHIITASGSEHGGCSTSEEIVPAPMNSHFFLTNIRDVNIYDCQRLESVFPLCYVEGVPQLQKMLISHAPKLEYVFGKCDHEHLSSHQNLNHGMLPHLEVLKLDYLDNLVGMCPENYQANWPSQSLRILTIENCRKMAIPWFNLKAGYHQSQHHLNEIWSFQCLQYLTMGNCEELKCLFSMETHRSLPELMCLRVYDCQELEQIAAPNEELLQLSNAAELYFPKLEQIEVKNCNKLKSVFPFFMVTMLPQLITLRLSKATQLQVVFRHGQGEDIVNKMEISLPNLTEVTLVDLPNFVDICHGCKLHAIELLQFNISNCPKIAPGLTKIQDETEEASEDSSSISNDVEDFIYFVSRQKAYDELFETLNDDSIHMIGLYGESGSGKTTLVTQVGKQAEDRKMFDEVISITVSQTPDIRAIGGQHLWMSLKEKKRILIIVDSLWKEFNLKDIGIYLDDFNKEAWKIIVITSDQHVCTLMNCQKEIYLGILSEDESWILFQKHAQVDDQFSDSMDGVPRKLCDECKGLPITIKTLASSLKGKQNIEWESGLAKLRDLEALEDHEERVTHPLNCLKLCYDYLPRPEVQLLQVCSLYPQEHHIPTEDLMRCALGLGIQSNRSLIQTLINKLFESSKQMRGSVKINDMVRDTTLWIANRSYNNKILVNVDMPLSIVANDNRVKDCFAVSSWWFNENPSFCQLDAPNLKMLLVNIIAHSSLNSLDLSPLTFEGIQGLEVFSLTINYKIVPISFPPSIQLLTNVRTLRLNGLKLGDISFIASLTSLEILDLRRCEFKELPIEIGNLRSLKLLDLSECHIFQYYYNGAIGKCSQLEEFYASKCYPKYVHEIILDIGILQNLQRFVLGYPITPERTRVVQVNDFDISKLRTSNKNILQIAETISLKGLRGGSVNIIPDMVGFVGGMNNLSTLHLTDCSEIECIFDTTCDFQEDELIPRLVELHLKYMYHLTELCHGPPLQVLQFFEKLELLDIHDCKELRIIFPRQCNLQNLKILRLYHCKTDEVLFSESVAQSLQQLEQLTISECFNLKHLIASGGCKHGGYNTSEEIIPAPMNSHFFMTNLREVKISSCQSLESIFPIFYVEGLPRLKKMDISHAPEQKYVFGECNHERPSSYQYQNHVLLPQLEDLTLSQLPNLIGMCPEHCHAKWPPQSLWKLNIDNCERLVTRWFTFNVGYDKRTHHLNENSPAKLKHLKLSQCLKVTKCYELIWSFQCLRRLKVTKCYELKCVFSMETHGSLPELMELYVYECKELEQIVEANAELYFPKLKHIEVKKCNKLESLFPLSMVTMLPQLSTLRLSESVALKEVFRHSQSHNIMNTMEIVLPNLNVIRLSSLPNFVDICRGCKLHADKLREIDVYNCPNSAPSLKQIQDEIKRR* 2174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4128 2173 Gene3D - 1273 1364 IPR042197 -
Tpr3g4128 2173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 331 IPR027417 -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 928 1117 IPR032675 -
Tpr3g4128 2173 SUPERFAMILY L domain-like 386 896 - -
Tpr3g4128 2173 Gene3D - 230 317 IPR042197 -
Tpr3g4128 2173 SUPERFAMILY RNI-like 1986 2162 - -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 448 610 IPR032675 -
Tpr3g4128 2173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1135 1372 IPR027417 -
Tpr3g4128 2173 CDD AAA 76 214 - -
Tpr3g4128 2173 Gene3D - 318 396 IPR036388 -
Tpr3g4128 2173 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1146 1961 - -
Tpr3g4128 2173 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 88 925 - -
Tpr3g4128 2173 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1974 2158 - -
Tpr3g4128 2173 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 946 1108 - -
Tpr3g4128 2173 SUPERFAMILY L domain-like 1427 1939 - -
Tpr3g4128 2173 PANTHER - 88 925 - -
Tpr3g4128 2173 PANTHER - 946 1108 - -
Tpr3g4128 2173 PANTHER - 1146 1961 - -
Tpr3g4128 2173 PANTHER - 1974 2158 - -
Tpr3g4128 2173 SMART AAA_5 1157 1293 IPR003593 -
Tpr3g4128 2173 SMART AAA_5 93 284 IPR003593 -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 1468 1837 IPR032675 -
Tpr3g4128 2173 CDD AAA 1140 1256 - -
Tpr3g4128 2173 Gene3D - 1127 1270 IPR027417 -
Tpr3g4128 2173 Gene3D - 63 229 IPR027417 -
Tpr3g4128 2173 Pfam NB-ARC domain 1143 1205 IPR002182 GO:0043531
Tpr3g4128 2173 Pfam NB-ARC domain 79 318 IPR002182 GO:0043531
Tpr3g4128 2173 Pfam NB-ARC domain 1213 1361 IPR002182 GO:0043531
Tpr3g4128 2173 PRINTS Disease resistance protein signature 96 111 - -
Tpr3g4128 2173 PRINTS Disease resistance protein signature 171 185 - -
Tpr3g4128 2173 PRINTS Disease resistance protein signature 265 279 - -
Tpr3g4128 2173 PRINTS Disease resistance protein signature 544 560 - -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 2058 2172 IPR032675 -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 611 877 IPR032675 -
Tpr3g4128 2173 Gene3D Ribonuclease Inhibitor 1838 2057 IPR032675 -
Tpr3g4128 2173 SUPERFAMILY RNI-like 936 1109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4128 Tpr-Chr3 45824570 45834733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4128 94 791 WRKY Transcription Factor Family AT5G45050 24.226 5.22e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4128 - - mtr:MTR_3g053200 1320.06