Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4081 ATGGCATCTTCGGATGACGAAGTTGATACACAGCCAATTTTTGTATCAAATTACCATTTCGTAGATGATAAAGATGCGCCTGTTTGTTTCTCTGTGTTGCCAATTCAATGGAGTGAGTCTGAGAGTCTTGAAGGGAAGAAAGAGAAGGTTTTCCTTCACGGTAACGCCGATAATGGGTTGCAGAAAGTTTTCATTCAAGTCAAAGCATGGAGGTTTGATCTTTCCAATGTCAAGCCGGAGATATCGGTGTTATCTAAGGATGGGAGATGGATCAAACTTCAAAAGCCAAGGAAGAGTTATGAAGATATCGTAAGGACTGTTTTGATTACTGTTTATTTCATGCATTATGTGAAGAAGAATCCTGAAACATCGGCAAAATCTGTGTGGGATAGCTTGAGTAAGAATAAGGATTTCAGCTATTATGAAGTTAAGCCTTCGCAAAATGATTTGTTAAACCACATGGCTTTAATCGGTGAAGCTGCCACAAGGGATACCGTCTTAGCAAAGTCCAAGCTTTTGCTCACGGTTCTGGAAGATAAGGATAGGATGAGGATTAAGAAAAATCCTGACGAGGAAGTTAAAGAGCTAACACGACCTGAATTTATAGTTGATGATATTGACAATGATGCAATTGATGAAACTGTTGCTGAGGAAGAGTCAGATGAAGAGGATGAGTTATTTGATTCTGTTTGTTCGTTTTGTGACAATGGTGGTGAACTTTTGTGTTGTGATGGAAAGTGCATGAGGTCATTTCATGCTAATGAGGAGGACGGTGAAGAATCTTCTTGTGCCTCTCTTGGATTTAGCCGGAAGGAAGTTGAGGAGATCCAAAATTTCTATTGTAAGAATTGCAAATATAATAAACACCAGTGCTTTGCATGTGGCGAACTAGGCTGTTCGGATAAATTTGCTGGTGCTGAGGTCTTCAAATGCGCTTCTGCAACCTGCGGTTTCTTTTATCATCCAGAATGTGTTACAAAGTTACTTCACCGGGTGGTTGAGGATGTTCCTCCTGAACTTGTAAGAAATATAGCTAAAGGGGAACCTTTCACTTGTCCTGCTCATTATTGCTGTATCTGCAAAGAAATGGAAAACAAGAAGGAGCACGAGTTACACTTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGCAAATGTTTGCCAAGAAAGATTGCTTTTGAAGACATAGAGGAAGAAGGCATTGTGGCCAGGGCTTGGGAAGGTCTTTTGCCAAACAATCGCATTCTTATTTATTGCTTAAAGCATGAGATAGATGATGAACTTGGAACTCCTATAAGAGATCATATAAAATTCCCCTATGTTAAAGAAAAGACAAAGCCTGCAACCAAAGAAGTTATAAACAAGAACAATGCTAAGTTAGAAGATTTACCTGTCACAAGACCTAGTGCCAAATTATCTAAATTGTCTGGTAAAATGTCCTCTGGGAAAGTTGGTATTGAGAATCCTGGAAAGATTTCTGGATCAAATATCCCTAGAAAGAAAGCAAATGAAGCATCAAGGAGGTATTTGAATGAAACTAAGAGGTCAATTTTAAAGGAAACCGAAAGGTCTGACTATGAGGAAAACCAGCCCTCACTGGGTGAGCAACTTTTTTCTTTCTACCAGAAGGGTTCCAAGCAAATTAGTTCTGGCAATCATGTTGATAATGTATCTGATAACACCCTGTCTGTTAAGCGTACTAAAAAGCTGAGCAGTGCACCACCCCAATTAGATGCAGATTCAGAGAGGAGATTGTTGGCTTTGTTTAAAGAAGCTTCATCATCAATTACTATGGAGAAAGTCATAAAAGAACATAACTTTACTTCTACTCATGCTCACTCACTGAAAAATGTTGTGGAGAAGACTATTACAGTGGGAAAGTTGGAAGGTTCAGTTGAGGCTGTTCGGACAGCTTTAAGGATGCTGGATGATGGACATAGCATTCGGGATGCAGAAGCTGTTTGTGGTCCCGATGTTATGAACCGGTTATTCAAGTGGAAGGACAAGTTGAAAGTGTATCTTGCACCTGTTCTACACGGTAATCGCTACACATCATATGGTCGCCATTTTACACAAGTGGAAAAGCTGGAAGGGATTGTGGATAAACTCCATTGGTATGTTCAGAATGGTGATACGATTGTGGACTTCTGCTGTGGTGCTAATGATTTTAGCAGACTCATGAAGAAAAAGCTTGAAGAGACTGGGAAGAGATGCTCGTACAAAAACTTCGATTTACTTCCAACAAAGAACGATTTTAATTTTGAGATGAGAGATTGGATGACTGTCCAGCGAACGGAGTTGCCTACAGGGTCACAGTTGATCATGGGCCTCAATCCCCCCTTTGGACTTAAAGCAGCTTTGGCAAACAAGTTTATAGACAAGGCTTTAGAGTTTCAGCCTAAGCTCATGATTCTTATAGTACCACCAGAGACACAGAGGCTGGATAGAAAACGAAAGCCATATGATCTTGTCTGGGAGGACGAGAGGTTTCTATCAGGCAAGTCGTTTTATCTACCTGGATCAGTTGATGCTAATGAAAAGCAAATGGACCAATGGAATGTAACGCCACCCCCGCTCTACCTTTGGAGCCATCCAGACTGGGCTGATAAGCATAAACTCATAGCCCAGGAGCATGGTCACCTGAGACGGCATGACCTATCAAGGATGGATAGTTTCGATAAGGATAAATCCTCTGCCAGTCATACAATGGATGATGATTATGTTGATGATACCATGTTGGATCGTATGCTGGATCATGATTTCTTGAAGTCAACTAATGATGAAGATTGCTCATTTATGGTAGGTCATATGGAAGGCCTGTCCCGTGGAAATGTTGATCAACAGGAGTATTTGGCGACTAAGGCTGAGAACACTTCATGGAAAAGGAAACGAATAGATGATGGAAGAGAACCAGCTGTGACCTCACAAGCTAAAAGACAAAATATAAATGAAATGCATGAGGGAGTACTGGACCATGGTAACTCAAATCCACTTGAATTCGAAGGATATCAGTCTGAATCAGATATGATAATTTCAGATGATGAGGCCGCTGAAAATGGTCACACGCCTCTGGAGCCCCACTCTTCCGTCGGTGATGATGGCTATAGGCCTCTTGAACCCCTCTCCTCCTCCCGGATGGAGTTTGGAGACGCCTATGATGGGACCCAAAATTGGCGAAATGTTGCTGATCCCCTTCCTGATTATGGGTTGGCAGATTTACAAGATCACAATAGCAGCCATCTGGGAGATGGCACAAGTAGCCTTGGATATAGACCTGTTCTCAGGGAGGATGATAATCCAATTCACCCTCCTGGAGTTCCGAATTCTGATCCTATGAGTAGTAGTTATCTACCTGGTCATGGTTCTGCTTATAACCAATTGGGATCTACTTATTCTGTACTTGGTTCTGGATCTGAATTGCCTTACATGATCAATACACCAGCTATGCAGACGAATACACCGGCTATGCAACGGTATGCATCTCGTCTCGATGCATTAAACTATGTCAGCACAAATTCTTTGGAGCCTGAACATCCTATAATTGGTAGAAATACCACTGCTGAACGTAGTACATCCCAACCTGGATCTGGAAATGTGCCGCCAAGTTTTCCAGGTGGTCCTTCCCATTTGTATTCACGCCAGAATTCATCAAGTTGGTTTAGTGATTAA 3672 0.4161 MASSDDEVDTQPIFVSNYHFVDDKDAPVCFSVLPIQWSESESLEGKKEKVFLHGNADNGLQKVFIQVKAWRFDLSNVKPEISVLSKDGRWIKLQKPRKSYEDIVRTVLITVYFMHYVKKNPETSAKSVWDSLSKNKDFSYYEVKPSQNDLLNHMALIGEAATRDTVLAKSKLLLTVLEDKDRMRIKKNPDEEVKELTRPEFIVDDIDNDAIDETVAEEESDEEDELFDSVCSFCDNGGELLCCDGKCMRSFHANEEDGEESSCASLGFSRKEVEEIQNFYCKNCKYNKHQCFACGELGCSDKFAGAEVFKCASATCGFFYHPECVTKLLHRVVEDVPPELVRNIAKGEPFTCPAHYCCICKEMENKKEHELHFAVCRRCPKSYHRKCLPRKIAFEDIEEEGIVARAWEGLLPNNRILIYCLKHEIDDELGTPIRDHIKFPYVKEKTKPATKEVINKNNAKLEDLPVTRPSAKLSKLSGKMSSGKVGIENPGKISGSNIPRKKANEASRRYLNETKRSILKETERSDYEENQPSLGEQLFSFYQKGSKQISSGNHVDNVSDNTLSVKRTKKLSSAPPQLDADSERRLLALFKEASSSITMEKVIKEHNFTSTHAHSLKNVVEKTITVGKLEGSVEAVRTALRMLDDGHSIRDAEAVCGPDVMNRLFKWKDKLKVYLAPVLHGNRYTSYGRHFTQVEKLEGIVDKLHWYVQNGDTIVDFCCGANDFSRLMKKKLEETGKRCSYKNFDLLPTKNDFNFEMRDWMTVQRTELPTGSQLIMGLNPPFGLKAALANKFIDKALEFQPKLMILIVPPETQRLDRKRKPYDLVWEDERFLSGKSFYLPGSVDANEKQMDQWNVTPPPLYLWSHPDWADKHKLIAQEHGHLRRHDLSRMDSFDKDKSSASHTMDDDYVDDTMLDRMLDHDFLKSTNDEDCSFMVGHMEGLSRGNVDQQEYLATKAENTSWKRKRIDDGREPAVTSQAKRQNINEMHEGVLDHGNSNPLEFEGYQSESDMIISDDEAAENGHTPLEPHSSVGDDGYRPLEPLSSSRMEFGDAYDGTQNWRNVADPLPDYGLADLQDHNSSHLGDGTSSLGYRPVLREDDNPIHPPGVPNSDPMSSSYLPGHGSAYNQLGSTYSVLGSGSELPYMINTPAMQTNTPAMQRYASRLDALNYVSTNSLEPEHPIIGRNTTAERSTSQPGSGNVPPSFPGGPSHLYSRQNSSSWFSD* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4081 1223 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1 1218 - -
Tpr3g4081 1223 SMART PHD_3 290 356 IPR001965 -
Tpr3g4081 1223 SMART PHD_3 357 424 IPR001965 -
Tpr3g4081 1223 SMART PHD_3 230 285 IPR001965 -
Tpr3g4081 1223 MobiDBLite consensus disorder prediction 1209 1223 - -
Tpr3g4081 1223 MobiDBLite consensus disorder prediction 1177 1200 - -
Tpr3g4081 1223 CDD PHD2_NSD 290 355 - -
Tpr3g4081 1223 MobiDBLite consensus disorder prediction 1177 1223 - -
Tpr3g4081 1223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 378 IPR013083 -
Tpr3g4081 1223 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 1218 - -
Tpr3g4081 1223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 287 IPR013083 -
Tpr3g4081 1223 CDD PHD3_NSD 356 389 - -
Tpr3g4081 1223 Pfam Cytosine specific DNA methyltransferase replication foci domain 15 133 IPR022702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4081 Tpr-Chr3 45341700 45355572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4081 219 331 PHD Transcription Factor Family AT3G14980 30.973 3.11e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4081 - - mtr:MTR_3g055370 2037.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4081 3 45341700 45355572 Tpr4g0118 4 1394709 1401831 PCT