Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4078 ATGTTGTTCGGTGTCATTGGTGTTTTTATTTCAGCATCTATTATTACATGCGGCAGCTGGTGGCTCTTCCCCAAGTTGAACTTCCTTGACCTCACCGTGCGAGATTATCTTGCTTTAGGAACAATATTCTCCTCAACGGACACAGTTTGTACGCTACAGGTTCTCTCTCAAGATGATACTCCTTTACTATACAGCCTAGTATTTGGGGAAGGAGTGGTAAATGATGCAACATCGGTCGTACTCTTCAATGCAGTGCAAAAGATTGATGTTTCGAAACTTGACAGCCGGACATTGCGTGTTGTTGGTGATTTCTTGTATCTATTCTCAACAAGTACTGCTCTTGGAGTTGTAGCTGGACTTATCACAGCATATATCTTAAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATCTCGATGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATTTGAGCTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATCAATGTCACATTATGCATGGCATAATGTGACTGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCGTTTATTGCGGAAACTTTCATATTTCTTTATGTCGGTATGGATGCCCTTGACATGTCAAAGTGGAGGATGACCGAATTAGGAATTGTAAATTTGATGGGAATTTACAGCGGCTTAATATTTTTAATATTACTTGGAAGAGCTGCATTTGTTTTCCCCCTCTCCGCACTTGCCAATTATATGAATAGGCGTTCTGAAGAAACACCGAGTATCACATTCAAACACCAGATAATTATTTGGTGGGCGGGGCTAATGAGGGGAGCAGTTTCAATTGCTTTGGCTTTCAAACAGTTCACGTACTCGGGAGTTACTTCTGATCCAATTAATGCGACAATGATCACCAACACCATTATTGTTGTCCTTTTCACCACACTGGTGTTTGGTTGTCTAACAAAACCACTTATTCGATATCTACTTCCACACCATGCAACAAGGGCAACCACCAGCCATGAAGAAGAAACAACGGGACCTGTTGAGGACATGAATCTACCTTTGTTATCCTTTGAGGAATCGGCAGCAACTAACATTAGCCGTGCAAAGGAAAGTCTATCCATGTTAATAGAAAGTCCCGTGTACACCATACATTACTATTGGAGAAAGTTTGATGATGCCTACATGAGACCAATATTTGGAGGACCGCGTGCTAACAATTCAGACTGCTAG 1248 0.4103 MLFGVIGVFISASIITCGSWWLFPKLNFLDLTVRDYLALGTIFSSTDTVCTLQVLSQDDTPLLYSLVFGEGVVNDATSVVLFNAVQKIDVSKLDSRTLRVVGDFLYLFSTSTALGVVAGLITAYILKALSFGRHSSVREISMMMLMAYLSYMLAELFELSGILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDMSKWRMTELGIVNLMGIYSGLIFLILLGRAAFVFPLSALANYMNRRSEETPSITFKHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPINATMITNTIIVVLFTTLVFGCLTKPLIRYLLPHHATRATTSHEEETTGPVEDMNLPLLSFEESAATNISRAKESLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPRANNSDC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4078 415 Pfam Sodium/hydrogen exchanger family 2 330 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr3g4078 415 PANTHER SODIUM/HYDROGEN EXCHANGER 1 412 - -
Tpr3g4078 415 PANTHER SODIUM/HYDROGEN EXCHANGER 1 412 IPR018422 GO:0006812|GO:0015299|GO:0016021
Tpr3g4078 415 Gene3D - 32 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4078 Tpr-Chr3 45326404 45330450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4078 1 415 Antiporters AT5G55470 70.883 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4078 - - gmx:100813332 676.011