Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4063 ATGGCAGAAATAGCAGTGTCATTTGCTATTGACAAACTGCTTCCATTGTTAACAGAAGAATTCAATTTGCTCAAAGGTGTTCACAAGGAATTTGCAGACATTAAAGATGAACTCGAAAGCATCCAAGCCTTCCTTAAGGATGCTGATAGAAGAGCTGCTGCACCTAATGGAGACAACAATGGTGAAGGAGTCAAAACATGGGTCAAACAGATTAGGGAAGCAGCTTTTCAGATAGAAGACATCATTGATAACTATATGATGTATGCGGAACAACGCCACAATTTTTCTCACTTGTTCAAAACTTTGAAACAACGCCATAAAATAGCGTCTGGGATTCGAGACATTAAGTCATTGGTGCGTGGGATCAAGGAAAGAAGTGAAAGATATGGTTTCCAACGTTCTTTGGATCAAGGATCAAGCCATTCTAGAGGAAGCCAGAATGTCAAACTGCACCCCCTTCGAGAGGCTGCTCTTTACATTGACGAAGCTGACGTTGTAGGCTTTGAAGCTCCAGGAAAAACATTGACTGATTGGATGGTAAATGAAAGAGAAGAGCACACTGTCATCTCTGTGGTAGGAATGGGAGGGCAAGGTAAAACCACTCTAGTCAAGAAAGTTTTTGACAACAAGGATGTCATTGCACACTTTGATTGTCGTGTATGGATCACAGTGTCACAAACATATGATGTTAAAGAGGTGTTAAGGGACATGTTGCTAAAAATTTACAAACAAAAAGACGAGAATCCACCTCAGAATATTAATCAGATGGATCAAAGGTCATTGACTGAAGAACTGAGAAACTGCTTGAAGACAAAGAGGTACGTTGTGGTGTTTGATGATGTTTGGAGTGTAAATTTTTGGGATCATATTAAATTTGCTTTAATTGATAATAAAAGTGGAAGTAAGATATTTATAACAACAAGGAACGAGGAAGTTTTGGTGTCTTGTAAAATATCTTCTTTCACTAAAGTGCTTCATTTGCAACCTTTAACTCAAGAACAGTCTTTGACATTGTTTAATAAGAGGGCATTCAAATTTGACTATGCTGGATGTTGTCCAGAAGAGCTCGTTGGTATAGCTAATGAAATTGTTCAAAAATGTAAGGGCTTACCGCTAGCAATTGTTGCCATTGGTGGTCTTTTGTCTACAAAAGAGAAGCATGTTTTTGAGTGGCAGAGATTTAGTGAAAATTTAAGTGCAGAACTAAAGAAAGATACCCATTTAATGGGTATAAAAGAAGTTTTAGCCTTAAGTTACGATGATTTGCCTTACTATCTCAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTATCAAGTTAATTCAAATAGAGTGATTCGACAATGGATAGGTGAAGGGTTTGTGAAAGAGGAAAGTGGGAAGACTTTGGAAGAAGTTGCAGAAGGATATTTAACAGAGTTGATCCATAGAAGCTTGGTGCAAGTATCTTCAATAAGAACTGATGGAAAAGCTAAAGGTTGCCGTGTTCATGATCTAGTACGTGAAATGATCCTTGAAAAAAATGAGGATTTAAATTTTTTCAAGCATATTAGTGAAGATGGACATTCATCCTTTAGCGGAAGAATTCACCGTTTGTCAATAACAACCATTTCCGATGATTTCGTTGAGCATATTGGAAGCTCACATGTTCGATCACTGCTTGTTATCCCAGATAAAGAATCAAAAACAAATTTTGAGTTTAAAATCCCTAAAACTTTCAAGTTGTTGAGGGTTCTTGATTGTAACTCCGATTCATTGATGAGCTTTCCTGAGAATTTCGGAAATTTTATCCACTTGAAGTATTTAAGCTTGGGGTTTGATGAGATATTGAAAATCTTAAAATCTATTGGCATGCTTCGTAACCTGGAGACCTTGAAAATACGGAGTTTAACACAACTTATTGAGTTGCCCAAAGAGATTAGTAAACTTAGAAAGCTAAGACATCTTATCAGCAAGAAACTGTCTTTGATTCAATTAGAGGAAGGTATTGGAGAGATGGCATCCCTACAAACGCTACATAGTGTTGATTTAAATACTGATGGAGCAGCAAAGATAATTAAAGGGTTAGGAAAGCTGAATCAGATGAGGGATTTGAGGTTGGTTAATGTTCGTAGAGAAGATGGAATCATTCTATCTTCGTCAATCAATGAAATGCAACACTTGGAAAGGCTATATGTTGAAGCAATTAGAAGTGAAGATGATTATGAAGTCATTGATTTGGATTTGATTTCATTGCCAACTAAGCTTCGAAAACTAACACTATATGGGATTCTACAGAAGTTGCCTGAATGGATTCCAAAGCTTCAAAATCTTGTTGATTTGTTTTTGGACCACTCTCGTTTAACTGAAGATTCATTGAAATCACTAAATTGTTTGCAACACTTGTTGTCCCTCACTTTTCCGATGCATTCTTATGAAGGTTTGTTTTTGCATTTTGAAGATGGATGGTTTCAAAAACTAAAGACACTGAATGTTATATATTGCATACAATTGAGATTAGTTATTATTGACAAAGGAGCACTGCCTTCTCTGAAAATGCTGAAGTTAGGCATTCTCTGGAATCTGGAGAATATACCCATTGGCATCCAACACTTGGAGAAGCTTGAAGTTCTCCGTATTTTTTTTGTATCAGATGAATTTGTGAAGAACATTTCTACTGAGGATTGGAATTCGATGCAGCATGTACCCCTTGTAGACATTTCTGACCGTAATAGAATTTCTAATTAA 2733 0.3655 MAEIAVSFAIDKLLPLLTEEFNLLKGVHKEFADIKDELESIQAFLKDADRRAAAPNGDNNGEGVKTWVKQIREAAFQIEDIIDNYMMYAEQRHNFSHLFKTLKQRHKIASGIRDIKSLVRGIKERSERYGFQRSLDQGSSHSRGSQNVKLHPLREAALYIDEADVVGFEAPGKTLTDWMVNEREEHTVISVVGMGGQGKTTLVKKVFDNKDVIAHFDCRVWITVSQTYDVKEVLRDMLLKIYKQKDENPPQNINQMDQRSLTEELRNCLKTKRYVVVFDDVWSVNFWDHIKFALIDNKSGSKIFITTRNEEVLVSCKISSFTKVLHLQPLTQEQSLTLFNKRAFKFDYAGCCPEELVGIANEIVQKCKGLPLAIVAIGGLLSTKEKHVFEWQRFSENLSAELKKDTHLMGIKEVLALSYDDLPYYLKSCLLYFGMYPEDYQVNSNRVIRQWIGEGFVKEESGKTLEEVAEGYLTELIHRSLVQVSSIRTDGKAKGCRVHDLVREMILEKNEDLNFFKHISEDGHSSFSGRIHRLSITTISDDFVEHIGSSHVRSLLVIPDKESKTNFEFKIPKTFKLLRVLDCNSDSLMSFPENFGNFIHLKYLSLGFDEILKILKSIGMLRNLETLKIRSLTQLIELPKEISKLRKLRHLISKKLSLIQLEEGIGEMASLQTLHSVDLNTDGAAKIIKGLGKLNQMRDLRLVNVRREDGIILSSSINEMQHLERLYVEAIRSEDDYEVIDLDLISLPTKLRKLTLYGILQKLPEWIPKLQNLVDLFLDHSRLTEDSLKSLNCLQHLLSLTFPMHSYEGLFLHFEDGWFQKLKTLNVIYCIQLRLVIIDKGALPSLKMLKLGILWNLENIPIGIQHLEKLEVLRIFFVSDEFVKNISTEDWNSMQHVPLVDISDRNRISN* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4063 910 PRINTS Disease resistance protein signature 188 203 - -
Tpr3g4063 910 PRINTS Disease resistance protein signature 268 282 - -
Tpr3g4063 910 PRINTS Disease resistance protein signature 367 381 - -
Tpr3g4063 910 PRINTS Disease resistance protein signature 619 635 - -
Tpr3g4063 910 CDD RX-CC_like 2 124 IPR038005 -
Tpr3g4063 910 Gene3D - 161 321 IPR027417 -
Tpr3g4063 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 433 IPR027417 -
Tpr3g4063 910 Pfam Rx N-terminal domain 5 100 IPR041118 -
Tpr3g4063 910 Gene3D - 329 423 IPR042197 -
Tpr3g4063 910 Gene3D - 425 510 IPR036388 -
Tpr3g4063 910 PANTHER DISEASE RESISTANCE PROTEIN RP 30 875 IPR044974 GO:0006952
Tpr3g4063 910 Pfam NB-ARC domain 175 421 IPR002182 GO:0043531
Tpr3g4063 910 Gene3D Ribonuclease Inhibitor 549 909 IPR032675 -
Tpr3g4063 910 Gene3D - 4 109 - -
Tpr3g4063 910 SUPERFAMILY L domain-like 497 877 - -
Tpr3g4063 910 PANTHER - 30 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4063 Tpr-Chr3 45199364 45202909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4063 161 421 WRKY Transcription Factor Family AT4G12020 25.475 1.77e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4063 K13457 - gmx:100819372 901.353