Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4058 ATGGCAGAAATAGCTGTGAAGTTGGCTATTGACCAATTACTTCCATTGTTAAAAAAAGAAGTGAAACTGCTTAAAGGTGTTCACAAGGAATTTACAGACATTAAAGATGAACTGGAAAGCATCCAAGCCTTCCTTAAGGATGCTGATAGAAGAGCTGCTGCAGCTGATGGAGACAACAATAGTGAAGGAGTCAAAACCTGGGTGAAACAGGTTACGGAAGCAGCTTTTCGGATAGAAGACATCATTGATAACTATATGATGTATGTGGGACAACAACCGCGTAATCCCGGATGTGCAGCTTTAATCAACAATTTTATAACTTCGAAACAACGCCATCAAATAGCGTCTGGAATTCAGGACATCAAGTCATCGGTGTCTAGGATCAAGGAAAGAAGTGAAAGATATGGTTTCCAACGTTCTTTGAATCAAGGGTCAAGAGATTACAGAGGAAGCCGGAATAACCAATGGCACGACCCTCGAGTGGCTGCTCTTAACATTGTGGAAGCTGATGTTGTGGGCTTTGAGGTGCCCAAACAAAGATTGATTAATTGGATGGTAAAGGGAAAAGAGCCTACTGTCATCTCAATAGTAGGAATGGGAGGGCAAGGAAAAACCACCCTTGCCAAGATTGTTTTTGACAACAAGGATATTATTGGACACTTTGATTGTCATGTTTTTATCACAGTGTCTCAATCATATACTGTTGAAGGTTTGTTGAGGAACATGCTGGTAAAGCTTTATAAAGAAAACGACGAGGTTCCTCCTCCGAGGATTTTTGAAAAGTATCAAGAGTCAATGTTGACTGATGAAGTGAAAAACTACTTGCAGAATAAGAGGTACGTTGTTGTGTTTGATGATGTTTGGAATGAACATTTCTGGGATGATGTTGAATTTGCTTTAATTGATAATAAAAATGGAAGTAAAATATTAATCACAACAAGGAACGCCAATGTTCTGGTGTCTTGTAGTAAATCTTCTTTCATTGTAAAAAAGCATGAATTGCAACCTTTAACTCCAAAACAGTCTCGAGAGTTGTTCAATAAAAAGGCATTCAAAATTAACAATGATTCAAAAAAGCTCAATGATATAGCTTATGAAATTGTTGAACAATGCAATGGTTTACCACTAGCAATTGTTGCCATTGGTGGTCTTTTGTCTACAAGAGAGAAAAATGTGTCTGAGTGGGAGCAATTTAGAGATAATCTAAGTTTAGCTCTAAGAAATGATACACATTTAATTGGCATAAAAAAAATTTTAGGTTTAAGTTATGATGATTTGCCTTACTATCTCAAGGCATGCTTGTTGTATTTTGGATTATATCCAAAAGTTTATGAAATTAAATCAAAGAGGGTGATTCGACAGTGGATAGCTGAAGGGTTTGTGAAGGAGGAAAAGGGGAAGACTTTAGAAGAAGTTGCAGAAGGATATTTAATTGAGTTGATCCATAGAAGCTTGGTGCAGGTATCTTCCGTTAAAATTGATGGTAAAGTTAAAGGTTGTCGTGTTCATGATCAAATACGCGACATGATCCGCGAAAAATTTGAGGATTTCAATTTTTGCAAGCCTATTAGTGAAGATGGACAGTCATCCTCAGTTGGAATAATTCGGCACTTATCAATATCAACCACTTCCGTTTATTTAATGGATCGTATTGAAAGCTCGTATGTTCGGTCACTACATGTTTTCCAAGATGAAGATGAATATGTATGCCATGAACCGACAATCCCTGAAAAATTCAAGTTATTGAAGGTTCTTGATTTTGAATCTGCTCCAATGTTGAATGTTCCTAAGAATTTGGGAGATTTGATCCACTTGAAGTATTTAAGCTTCAGGAGTTCAAATCATGTCTCAAAATCAATTGGTATGTTCCAAAACCTAGAGACATTGGATGTAGGGGATACAACTACCCGTGAGTTGCCAAAGGAAATTAGCAAGCTTAGAAAGCTAAGGCACCTTATTGGATATAGATTGTCTTTAATTCAATTAAAGGATGGTATTGGAAAGATGACATCCCTACAAACACTATGCTCTGTTGATTTAGGAAAGGGTGGAGCAGAGGTAATTAAAGAGTTAGGAAAGCTGAAGCAAATAAGGGATTTGGTGTTGGTTAATGTTCATACAGAAGATGTAAGCATTCTATCTTCCGCAATCGATGAAATGAAACGCATAGAAAAACTATCTGTTTCATCATTTGATATACATACATTCATTGATTTGAATTTGATTTCACCGCCAACTAAGCTTCGAAAACTTCAACTACATGGGAAGCTACAGAAGTTACCAAAGTCGATATTAGAGCTTCAAAATCTTGTTGTGTTGAAATTGTCAAAATCCAAGTTAACTGAAGATCTAATGGAATCCCTACAAAGTTTGCAACACAGCTTGTTGATCCTCTCTATAGGTGATGATGCTTATCAAGGTTCACATTTGCATTTTCAAAATGGATGGTTTCAGAAACTAAAAGAACTTTATGTTGCACTTGGACTTGGACATGGGGATATCAATACTGTTATTGACAAAGGAGCACTGCCTTCTCTACAAAAACTACATTTAGAGAAGAATATACCCACCGGCATCCAACACTTAAAGAAGCTTGAAGTTCTCTATATTTCTAGAATGGAAGCTGAATTTGTGCAGCACATTTCTACTACTGAGGATTGGAATTGGATCATGGAGCATGTGCCAAATGTAGAAATTCATACCAAAGATGGGGAAGTTATTGGAAACTCGGACTTGACAAAGCATAAGAATTCTTTTCAGCATTTTCTGTTGTATTTTTCATCCTACCCTTATCTTAGCTTCTTTTTCTCTCTCTTCTGTGTTATTCTTTTTTTCCATGTCTTCTTTAATAAGTAA 2856 0.3659 MAEIAVKLAIDQLLPLLKKEVKLLKGVHKEFTDIKDELESIQAFLKDADRRAAAADGDNNSEGVKTWVKQVTEAAFRIEDIIDNYMMYVGQQPRNPGCAALINNFITSKQRHQIASGIQDIKSSVSRIKERSERYGFQRSLNQGSRDYRGSRNNQWHDPRVAALNIVEADVVGFEVPKQRLINWMVKGKEPTVISIVGMGGQGKTTLAKIVFDNKDIIGHFDCHVFITVSQSYTVEGLLRNMLVKLYKENDEVPPPRIFEKYQESMLTDEVKNYLQNKRYVVVFDDVWNEHFWDDVEFALIDNKNGSKILITTRNANVLVSCSKSSFIVKKHELQPLTPKQSRELFNKKAFKINNDSKKLNDIAYEIVEQCNGLPLAIVAIGGLLSTREKNVSEWEQFRDNLSLALRNDTHLIGIKKILGLSYDDLPYYLKACLLYFGLYPKVYEIKSKRVIRQWIAEGFVKEEKGKTLEEVAEGYLIELIHRSLVQVSSVKIDGKVKGCRVHDQIRDMIREKFEDFNFCKPISEDGQSSSVGIIRHLSISTTSVYLMDRIESSYVRSLHVFQDEDEYVCHEPTIPEKFKLLKVLDFESAPMLNVPKNLGDLIHLKYLSFRSSNHVSKSIGMFQNLETLDVGDTTTRELPKEISKLRKLRHLIGYRLSLIQLKDGIGKMTSLQTLCSVDLGKGGAEVIKELGKLKQIRDLVLVNVHTEDVSILSSAIDEMKRIEKLSVSSFDIHTFIDLNLISPPTKLRKLQLHGKLQKLPKSILELQNLVVLKLSKSKLTEDLMESLQSLQHSLLILSIGDDAYQGSHLHFQNGWFQKLKELYVALGLGHGDINTVIDKGALPSLQKLHLEKNIPTGIQHLKKLEVLYISRMEAEFVQHISTTEDWNWIMEHVPNVEIHTKDGEVIGNSDLTKHKNSFQHFLLYFSSYPYLSFFFSLFCVILFFHVFFNK* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4058 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 437 IPR027417 -
Tpr3g4058 951 Pfam NB-ARC domain 177 424 IPR002182 GO:0043531
Tpr3g4058 951 PRINTS Disease resistance protein signature 193 208 - -
Tpr3g4058 951 PRINTS Disease resistance protein signature 274 288 - -
Tpr3g4058 951 PRINTS Disease resistance protein signature 371 385 - -
Tpr3g4058 951 PRINTS Disease resistance protein signature 765 781 - -
Tpr3g4058 951 PANTHER - 23 880 - -
Tpr3g4058 951 SUPERFAMILY L domain-like 501 877 - -
Tpr3g4058 951 Gene3D - 337 422 IPR042197 -
Tpr3g4058 951 Gene3D - 165 330 IPR027417 -
Tpr3g4058 951 CDD RX-CC_like 2 130 IPR038005 -
Tpr3g4058 951 Gene3D - 4 115 - -
Tpr3g4058 951 Pfam Rx N-terminal domain 5 96 IPR041118 -
Tpr3g4058 951 Gene3D Ribonuclease Inhibitor 552 897 IPR032675 -
Tpr3g4058 951 Gene3D - 423 514 IPR036388 -
Tpr3g4058 951 PANTHER DISEASE RESISTANCE PROTEIN RP 23 880 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4058 Tpr-Chr3 45162613 45165899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4058 193 382 WRKY Transcription Factor Family AT5G45050 29.744 2.15e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4058 K13457 - gmx:100819372 819.305