Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4045 ATGCAAACATCACAGAAACATGAAATTTCTTATGGTTCTGGCAGGTTCTACGTTGAACCTGTGCAGAATCTGGACTCATATGGCTTACCTTCGAGTGAGAATTTAGAAAATTATTCTTCCTCTGATAACAGCAGCCAAACATTCTATCCTTCTCATCAAATTCTAGAACCATATGGCACCTTTGAATCTGCTTCAACAAGCAACAACAGTTTCCCTTACCAAAATTCTCCGTCTACTCTCAGCTTCTCACCTAACAATAGTCCGGTGTCACAGCTAGAGTCAAATTCATACGTGTTGAGACCACAACATTCTCTTGAATTTGTTAATGGTTCTCCTGAGGATGATGACTCTTACTTGAGACACGACCTTGATGACTTGAGGCATAAGATGCTAGAGCTGGAATCTGTTATGCTCGGACCTAACGCAGACATGCTAGATACATACGATGCTGAAGTTAAACAAGAATCTGCTTCGTTCTTATTAGAGTCAGAGAAGTGGAAGAAAAACATGGAGATGGTATCTAAAGGAGATCTGAAAGAGATGCTTTATACTTGTGCAAAAGCCGTAGATGAGAATGATATTGAGACAATTGAATGGATGGTTACCGAGTTACGCAAAATAGTATCGATTATGGGCAATCCGGTTGAACGATTGGGAGCATACATGTTGGAGGCTCTTGTTTCAAAGATGGCTTCTTCAGGAAGCACAATCTACAAATCGTTAAAATGTAGTGAACCTACTGGTAATGAACTACTCTCTTACATGCATGTACTTTATGAAATATGTCCATACTTTAAGTTCGGGTATATGTCGGCAAATGGAGCAATTGCTGAAGCTATGAAGGAGGAACGTGAAGTACACATAATTGATTTTCAAATTACTCAAGGAACTCAGTGGGTGAGTCTGATCCAGGCTCTTGCTCGCAGGCCTGGAGGACCCCCAAAGATCAGAATAACAGGCGTTGACGACTCGTATTCAGCTTATGCGCGCGGAGGAGGGGTTGATATAGTGGGGGGAAGGTTATCAACGCTTGCACAGTCATGTCATGTACCCTTTGAGTTCAATGCTGTTAGAGTTCCTGCTTCTGAGGTGCAACTCGGAGACTTTGAACTTCGACATGGTGAAGCTGTGGCGGTGAATTTTGCGCTTATGCTACACCATGTGCCGGATGAAAGTGTCAACATTCATAATCATCGTGACCGGTTGTTGCGATTGGCTAAGCACATATCTCCCAAGGTGGTGACTCTAGTTGAGCAAGAATTCAATACCAATAACGCTCCATTCTTGGAGCGTTTTGTCGAGACAATGAACTACAACTCAGCTGTTTATGAATCGATTGATCTTGTTCTTCCAAGGGATCACAAAGAGAGGATTAATGTCGAACAGCACTGTTTGGCTCGAGAAGTCGTCAACTTGGTAGCCTGTGAAGGGGAAGAAAGAGTGGAACGTCACGAGCCTATGAGTAAGTGGAGAATGCGTTTCGCAAAGGCTGGATTTACGCCTTATCCATTGAGCTCCTTCATCAATTCTTCAATCAAGGATCTTCTGGATAGCTACCGTGGACATTACACTCTAGAAGAGAGAGATGGTGCACTATATCTTGGTTGGAAGAATCAAGTTCTTGTTGCTTCTTGTGCTTGGAGATGA 1647 0.4274 MQTSQKHEISYGSGRFYVEPVQNLDSYGLPSSENLENYSSSDNSSQTFYPSHQILEPYGTFESASTSNNSFPYQNSPSTLSFSPNNSPVSQLESNSYVLRPQHSLEFVNGSPEDDDSYLRHDLDDLRHKMLELESVMLGPNADMLDTYDAEVKQESASFLLESEKWKKNMEMVSKGDLKEMLYTCAKAVDENDIETIEWMVTELRKIVSIMGNPVERLGAYMLEALVSKMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEEREVHIIDFQITQGTQWVSLIQALARRPGGPPKIRITGVDDSYSAYARGGGVDIVGGRLSTLAQSCHVPFEFNAVRVPASEVQLGDFELRHGEAVAVNFALMLHHVPDESVNIHNHRDRLLRLAKHISPKVVTLVEQEFNTNNAPFLERFVETMNYNSAVYESIDLVLPRDHKERINVEQHCLAREVVNLVACEGEERVERHEPMSKWRMRFAKAGFTPYPLSSFINSSIKDLLDSYRGHYTLEERDGALYLGWKNQVLVASCAWR* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4045 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 547 IPR005202 -
Tpr3g4045 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Tpr3g4045 548 MobiDBLite consensus disorder prediction 28 47 - -
Tpr3g4045 548 Pfam GRAS domain family 178 548 IPR005202 -
Tpr3g4045 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4045 Tpr-Chr3 45027441 45030725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4045 1 548 GRAS Transcription Factor Family AT1G50600 54.891 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g4045 GRAS 4.2e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4045 - - gmx:100785400 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4045 3 45027441 45030725 Tpr4g0158 4 1746269 1749627 PCT