Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4043 ATGTGTGATCCGTGTGCAAGTGTACTTTCTTGTGCTCGTGAAAACTTGCTTCCACTAGCTCGTAAGCATTTGCTTCCACTAGCCCTTGATCATTTGCTTCCAATACTAAAGGAAGCTGTGAACATGATTAGGGGCGTCCCAAATGACGAAATTGCACACATGAAACATGAACTCGAAACCATAGAAGAGTTCATCCATCAAGCAGATAAAATGGCTGATGCTGAAGAATACAACCCAAGTGATGGAACCAGAGAAAAAATCAAGCAGTTGATAGAAGCATCTTTTCGCATACAAGATGTCATCGATGAATATATCAACTGTGTGGAACAACAACTTCCAGATCCTGGATGTGCTACTGTTGCTTCTGAATATGTTAAAACTAAGATTCTCCGTCTCCAAATAGCCCATGATATTCAGATCATCAAATCCCGAATTACTGAAATAAAAGATACAAGTTCTGAAACCAATCATGAAGGATCAAGCAGTTCTGCTATAAACCCGAATGCCACTTTGTTGCAGAACCTTCGAAAGGCTCCTTTTTACCTGAAGGAAGCTGATGTTGTCGGCTTTGAAAAGCCAAGAGACAAATTGATTGATTGGCTGGTAAAGGGAAGAGATGAGCTCACTGTCGTCTCCGTAGTAGCAATGGGAGGGCAAGGAAAAACTACTCTTGCTAAAAAAGTTTTTGATCAGGTCAAGGGACAGTTTGATTATCATGTATGGATCACAGTGTCACAATCATACAATATTGAAGAGTTGCTGAGAGAGATGTTGAAGGAGCTTTGCAAACAACAAAATTTCAGTCCTCCTGAAATGATTCATGAAATGAATAAAGAGTTATTAGTGGAAAAAGTGAGAAACTATTTGCAGGAGAAAAGGTACGTTGTAGTGTTTGATGATGTATGGAATAACTCACCTTTTTGGGCTGATATTAAATTTGCTATGAGTGATAAACAAAAAGGTTGTAGGATATTAATCACCACTAGAATCATGGATGTTGCCACTTCTTGTAGGGAATCTTCTTTTGTTGAAATTCATGAATTGAAAGGTTTAGATGATGAACAATCTTTAAAATTGTTCAATAAGAAGGCATTTTATGACTTGGAGGAATGTTGTCCAGATAATCTTATTGATATATCTTCCAAAATTGTTAAAAAATGTGGTGGATTACCACTAGCAATTGTAGTCACCGGTGGTCTTTTATGTAAAAATAGAAATGCAATTGAATGGTACAAGTTTAATGATAATATCAAGCCAAAGTTAAAGAAAGATTCTGTGATAAACACATTTTTAGTTCTCAGTTATCATGATTTGTCTTACAATCTCAAGTCATGTCTGTTATATTTTGGAATATATCCTGAAGATTGGGAAGTTTATTCCACGAGACTAATTCGACAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGAATGACTTTGGAAGAGGTTGCAGAAGGATACTTAACAGAATTAATCCATAGAAGTTTAGTGCAAGTAGTTTCAATCAAAATTGATGGAAGAGCAAAAAGTTGTCGTGTTCATGATCTAGTGCATGATATGATCCTTAAAAAATTTGAGGATTTAAGTTTTTGCAAGAATATTAGTGAGGATGGCCAATCAGCTTTAAATGGAATAGTTCGACGCCTATCAATAACAACCAATTTGGATAATTTAATGGAAAGTAATGAAAGCTCGCAGGTTCGATCGCTGCTCGTTCCCAACCCCTACACATTACATGAATCCGTTGTAAGGAAAATTACTACAAAATTCAAGTTGTTGAAGGTGTTTGATGCTGAACTTGCTAGAGGAATTGAAGTTCCTGAAGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTATCATGAAGCCATATGATTATGAAACTGTACTTCCAAAATCCATTGGCATGCTTGAGAACCTAGAGACCTTGGATTTAACGGGAATAGCAGTCTATCATTTACCCAAAGAAATTTGTAAACTTAGAAAGTTACGACATTTTTTAGTCGGCAGATCATTGTCTCTGGTTCAATTGAAAGATTGTATTGGAGGAATGACATCCTTACAAACTCTACGTATGCTTTATTTGAAACAAGATGAAAGTGAAGATGATATTGTAGAGGCAATCAAAGAGCTAGGAAAGCTAAAGCAGCTAAAGGAGTTGGGCTTGCGCTCTCTTGACAGAAAATTTATGAGTGTTATATCTTCCTCAATCAATAAGCTGCAACAAATGGAAAAACTAACTTTGGTAGAATATCTAGGGTACAAAGATTACTACACATTCGATGATTTGAATTTGAATTTACCTAAGCTACGATATTTTGCACTGAAAGGTAATTTGGAGAAGTTGCCCAACTGGATTTCAAAACTTCCAAATCTTGTTAGTTTGAAGCTTAATTCATCCAGACTAAGAGAAGATTCAATGAAATTACTCAAAAGTATGCCAAACTTGATGTCCATTAGTTTCCTCCTTGATGCTTATCTAGGCAAAACCTTACATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTACGTCTTGAGTATGTGAAATACTTGAAAGACATCCTTATTGACCATGGTGCGTTGCCTTCTCTGGAAAAGCTCTCCATATCCGAAGCACCCGAACTCAAGACGTTACCAACTGGCATTCAACGCTTAAAGAAGCTTGAATATCTCACTATTAGATTTATGAGTGAGAAATTTACACAGAACTTTTTACTCAATGGAGGACAAGACCATTGGATCTTCAAGCAAGTGCCCTTTGTACGAATTTATTGTCCGAATGCCGCATTCATTGGTGGATCAAGGAGCTAG 2820 0.366 MCDPCASVLSCARENLLPLARKHLLPLALDHLLPILKEAVNMIRGVPNDEIAHMKHELETIEEFIHQADKMADAEEYNPSDGTREKIKQLIEASFRIQDVIDEYINCVEQQLPDPGCATVASEYVKTKILRLQIAHDIQIIKSRITEIKDTSSETNHEGSSSSAINPNATLLQNLRKAPFYLKEADVVGFEKPRDKLIDWLVKGRDELTVVSVVAMGGQGKTTLAKKVFDQVKGQFDYHVWITVSQSYNIEELLREMLKELCKQQNFSPPEMIHEMNKELLVEKVRNYLQEKRYVVVFDDVWNNSPFWADIKFAMSDKQKGCRILITTRIMDVATSCRESSFVEIHELKGLDDEQSLKLFNKKAFYDLEECCPDNLIDISSKIVKKCGGLPLAIVVTGGLLCKNRNAIEWYKFNDNIKPKLKKDSVINTFLVLSYHDLSYNLKSCLLYFGIYPEDWEVYSTRLIRQWIAEGFVKEEEGMTLEEVAEGYLTELIHRSLVQVVSIKIDGRAKSCRVHDLVHDMILKKFEDLSFCKNISEDGQSALNGIVRRLSITTNLDNLMESNESSQVRSLLVPNPYTLHESVVRKITTKFKLLKVFDAELARGIEVPEDLGSLNHLKYFSIMKPYDYETVLPKSIGMLENLETLDLTGIAVYHLPKEICKLRKLRHFLVGRSLSLVQLKDCIGGMTSLQTLRMLYLKQDESEDDIVEAIKELGKLKQLKELGLRSLDRKFMSVISSSINKLQQMEKLTLVEYLGYKDYYTFDDLNLNLPKLRYFALKGNLEKLPNWISKLPNLVSLKLNSSRLREDSMKLLKSMPNLMSISFLLDAYLGKTLHFQNEWFKNLKELRLEYVKYLKDILIDHGALPSLEKLSISEAPELKTLPTGIQRLKKLEYLTIRFMSEKFTQNFLLNGGQDHWIFKQVPFVRIYCPNAAFIGGSRS* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4043 939 PRINTS Disease resistance protein signature 210 225 - -
Tpr3g4043 939 PRINTS Disease resistance protein signature 288 302 - -
Tpr3g4043 939 PRINTS Disease resistance protein signature 387 401 - -
Tpr3g4043 939 PRINTS Disease resistance protein signature 637 653 - -
Tpr3g4043 939 SUPERFAMILY L domain-like 513 898 - -
Tpr3g4043 939 Gene3D - 436 526 IPR036388 -
Tpr3g4043 939 PANTHER DISEASE RESISTANCE PROTEIN RP 54 905 IPR044974 GO:0006952
Tpr3g4043 939 Gene3D Ribonuclease Inhibitor 552 910 IPR032675 -
Tpr3g4043 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 449 IPR027417 -
Tpr3g4043 939 CDD RX-CC_like 35 150 IPR038005 -
Tpr3g4043 939 Gene3D - 350 435 IPR042197 -
Tpr3g4043 939 Pfam Rx N-terminal domain 28 111 IPR041118 -
Tpr3g4043 939 Pfam NB-ARC domain 191 423 IPR002182 GO:0043531
Tpr3g4043 939 Gene3D - 26 139 - -
Tpr3g4043 939 Gene3D - 174 345 IPR027417 -
Tpr3g4043 939 PANTHER - 54 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4043 Tpr-Chr3 45006124 45009859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4043 207 398 WRKY Transcription Factor Family AT5G45050 30.570 3.84e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4043 K13457 - gmx:100819372 754.207