Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4041 ATGTGTGATATTTTGCAAGCAGCCAACATGCTTAGGGGTGTACCAAAAGAAATTGCAGAAATGAAAAATGAACTTGAAAACATTGAAGAATTCATCAACAAAGCAGATAGAATGGCTGATGATGTTGAAGATGAGAACACAAGTCAAGGAATCAAAGCAAGGATCAAACAGCTCATAGAAGCATCTTTTGATATACAAGATGTCATTGATGAATATATGATCTATGAGGAAAAACCTCATGGATGTGCTGGTGGTGCTAACTTGGCCAAAACTATGATTCTTCGTCACCGAATAGCCAACAAGATTCGGAACATTAAATCCCGAATTAGTGAAATGAATGATGCAAGGGGAATGGATCATATCTTCCATATACAATCAACTTTGGAACAAGGGTCAAATAGTTCTGCAATAAGCTTAAACGCCGATTTATTGCAGAACCTTCGAAAGGCTCCATTTTACATGGATGAAGCTGATATTGTAGGCTTTGAAATGCCTAGAGACATGTTGATTGATTGGTTGGTAGAGGGAAGAGCAGAGCGAACAATCGTCTCCGTTGTTGGAATGGGAGGACAAGGAAAAACAACTCTAGCCAAGAAAGTTTTTGACAACAATAAGATTGTTAAACACTTTGATTGTCATGTATGGATCAAAGTGTCTCAATCATACAATATAGAAGGATTGTTGAGGAGCATGTTGCACAAGTTTTACGAACAACAAGGAGCCAATCCTCCACCGAATATTCATCAAATGAATCGAGCGGTCTTAGTTGATGAAGTGAGAAAATACTTGAAGAAAAAAAGGTATGTTGTTGTTTTCGACGATGTATGGAACTTGCGATTTTGGGATGATATCGAATTTGCTATGATTGATAACAAAATGGGTTGTAAGATATTAATCACAACAAGGGATATAAATGTTTTGAATGCATGTAAGAAATCTGCTTTTGTTGAAGTGTATGAACTGAAATCTTTAACTGAAGAACAATCTCTAGAGTTGTTCAATAAGAAGGCATTTCATGACTTGAACGGACGTTGTCCGGAAAATCTTATTGATATATCTTCCAAAATTGTTGAAAAATGTAATGGGTTACCACTAGCAATTGTAGTCATTGGTGGTATTTTATCTTGCAAAGATAGAAATACATTAGAATGGTCTAATTTTAGTGAAAATCTAAATTCAGAATTAAAGGAAGATTCCCTGATAAAAAAAATTGTATGTCTTAGTTACCATGATTTGTCTTACAATCTCAAGTCATGTTTGTTGTATTTTGGATTATATCCCGAAGGCTGTATAGTTCCTTCAAAGATATTGATACGACAATGGATGGCTGAAAGGTTCGTGAAAGACGATATGGAAGAAACTTTTGAAGAGGTTGCAAAAGGATATTTAACAGAATTGATCAATAGAAGTTTGGTGCAAGTAGTTTCAATCAGTATTGATGGAAGAGCAAAAAGTTGTTGTGTTCATGATCTGGTCCATGCAACGATCCTCGAAAAATGTGAGGATTTAAGTTTTTGCAAGAATATTGATGAGGATGACCAATCATCTTTAAATGGAATGGTTCGACGTCTATCAATAGCAATCAAATCTGATAATTTAATGGAAAATATTGAAAACTCACAAGTTCGGTCACTTCTTGTCAAAACATTAAATGAAGCCTTTGTAAGAAGAATCCCTACAAAATACAGGCGGTTGAGCGTGCTTGATTTGGAGCATGTTGGATTGCGCAATGTTCCTAAAGATTTAGGATGTTTGAGCCACTTAAAGTATTTTAGGTTCAGGGAGAACTTTCGAGGTGACCGATGTGTACTTCCAAAAGCCATTGGCATGCTTGAGAACCTAGAAACCTTGGACTTAACACGTACAAGTTTCCATGCTATGCCAAAGGAGATATGCAAGCTTAGAAAGCTTCGCCATTTTCTAGGCTACAATATGTCTTTGATTCTATTGAAGGATGGTATTGGAGGTATGACATCCCTACAAACTCTACGCGATGTTTATTTAGATGGTGGAGTGAATGAAGTAGTAAAGCTAATCCAAGAGCTAGGAAAGCTAAAGCAGCTAAAGGAATTGGTCTTGATTGGTGTTAGGAGTACATACATGAGTGCTATATCTTCCTCAATCAATGAGATGCAACAAATGGAGAAACTACATATTCGCGCAAATGGATATAACATGGTCATTGATATGGATTTGAGTTCACCCCCTCCTATGCTTCGACATCTTACTCTTGAAGGGAAGTTAGAGATGTTGCCTGAGTGGATTCCAAAACTTCAAAATCTTGTTAAGTTAAAACTTAAATATTCTGAACTAACAGATGATAAAATGGAATTACTCAAAAGCATGCCAAACTTGTTGTCCCTTTCTCTTAGGGAAAATGCTTATGAAGCCGAAACCTTACATTTTCAACATGGATGGTTTGAGAATTTGAAGCACCTATATCTTGAAGATTTGGAAAACTTGAATTACATCATTATTGATGAAGGCGCATTGTGTTCTCTAAAAAAGCTACAATTAACCTTCATCCGCCATCTCAAGACGTTGCCAACTGGCATTCAACACTTAAAAAAGCTTGAAGTTCTCAACATCAAGCAAATGAGCCACTTATTTAGTGAAGCCTTTTTCTTCGATGAAGGAAAAGCGCATTGGAGCTTCAAGCATGTGCCCGTCGTAGATATTTAA 2682 0.3643 MCDILQAANMLRGVPKEIAEMKNELENIEEFINKADRMADDVEDENTSQGIKARIKQLIEASFDIQDVIDEYMIYEEKPHGCAGGANLAKTMILRHRIANKIRNIKSRISEMNDARGMDHIFHIQSTLEQGSNSSAISLNADLLQNLRKAPFYMDEADIVGFEMPRDMLIDWLVEGRAERTIVSVVGMGGQGKTTLAKKVFDNNKIVKHFDCHVWIKVSQSYNIEGLLRSMLHKFYEQQGANPPPNIHQMNRAVLVDEVRKYLKKKRYVVVFDDVWNLRFWDDIEFAMIDNKMGCKILITTRDINVLNACKKSAFVEVYELKSLTEEQSLELFNKKAFHDLNGRCPENLIDISSKIVEKCNGLPLAIVVIGGILSCKDRNTLEWSNFSENLNSELKEDSLIKKIVCLSYHDLSYNLKSCLLYFGLYPEGCIVPSKILIRQWMAERFVKDDMEETFEEVAKGYLTELINRSLVQVVSISIDGRAKSCCVHDLVHATILEKCEDLSFCKNIDEDDQSSLNGMVRRLSIAIKSDNLMENIENSQVRSLLVKTLNEAFVRRIPTKYRRLSVLDLEHVGLRNVPKDLGCLSHLKYFRFRENFRGDRCVLPKAIGMLENLETLDLTRTSFHAMPKEICKLRKLRHFLGYNMSLILLKDGIGGMTSLQTLRDVYLDGGVNEVVKLIQELGKLKQLKELVLIGVRSTYMSAISSSINEMQQMEKLHIRANGYNMVIDMDLSSPPPMLRHLTLEGKLEMLPEWIPKLQNLVKLKLKYSELTDDKMELLKSMPNLLSLSLRENAYEAETLHFQHGWFENLKHLYLEDLENLNYIIIDEGALCSLKKLQLTFIRHLKTLPTGIQHLKKLEVLNIKQMSHLFSEAFFFDEGKAHWSFKHVPVVDI* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4041 893 Gene3D - 323 409 IPR042197 -
Tpr3g4041 893 Gene3D Ribonuclease Inhibitor 526 874 IPR032675 -
Tpr3g4041 893 PANTHER DISEASE RESISTANCE PROTEIN RP 21 865 IPR044974 GO:0006952
Tpr3g4041 893 SUPERFAMILY L domain-like 489 869 - -
Tpr3g4041 893 Pfam Rx N-terminal domain 7 80 IPR041118 -
Tpr3g4041 893 Gene3D - 4 111 - -
Tpr3g4041 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 423 IPR027417 -
Tpr3g4041 893 PANTHER - 21 865 - -
Tpr3g4041 893 PRINTS Disease resistance protein signature 182 197 - -
Tpr3g4041 893 PRINTS Disease resistance protein signature 262 276 - -
Tpr3g4041 893 PRINTS Disease resistance protein signature 360 374 - -
Tpr3g4041 893 PRINTS Disease resistance protein signature 853 869 - -
Tpr3g4041 893 Coils Coil 18 45 - -
Tpr3g4041 893 CDD RX-CC_like 8 112 IPR038005 -
Tpr3g4041 893 Gene3D - 153 318 IPR027417 -
Tpr3g4041 893 Pfam NB-ARC domain 167 397 IPR002182 GO:0043531
Tpr3g4041 893 Gene3D - 410 500 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4041 Tpr-Chr3 44993497 44996713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4041 183 379 WRKY Transcription Factor Family AT5G45050 30.151 7.67e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4041 K13457 - gmx:100819372 788.104