Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4040 ATGGACAGGAAAATATCTCTTCAAAGGCTGGATATATATGGAGGTGGAAGTGGACAAGAATGCAACTTAAAAGGGTATGATATACCTTTAAAAAGCAAAGTGATACTGAATGCTTGGGCTATTGGAAGAGATCCAAATTATTGGGCCGACTCGGAGAAATTTTATCCCGAAAGGTTTATCGAAAGTTGTGTAGACTATAGGGGTAATAATTTTGAGTTCGTTCCATTTGGTGCTGGGAGAAGAATGTGCCCAGGAATCACATTTGGTGTGATTAATGTTGAGTATCCACTTGCACTGTTGATGTATCACTTTGATTGGAAACTTTCCGGTGGATTGAAAAGCGAAGATTTAGACATGAGTGAGACTTTTGGATCTGCGGTTACTCGAAAAGATGATTTATACCTTATTCCTACCACTTATCATCCTTAA 429 0.3846 MDRKISLQRLDIYGGGSGQECNLKGYDIPLKSKVILNAWAIGRDPNYWADSEKFYPERFIESCVDYRGNNFEFVPFGAGRRMCPGITFGVINVEYPLALLMYHFDWKLSGGLKSEDLDMSETFGSAVTRKDDLYLIPTTYHP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4040 142 Gene3D Cytochrome P450 17 132 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 PANTHER CYTOCHROME P450 71B11-RELATED 17 141 - -
Tpr3g4040 142 SUPERFAMILY Cytochrome P450 19 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 PRINTS E-class P450 group I signature 37 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 PRINTS E-class P450 group I signature 73 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 PRINTS E-class P450 group I signature 83 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 Pfam Cytochrome P450 19 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4040 142 PANTHER CYTOCHROME P450 71D9 17 141 - -
Tpr3g4040 142 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 76 85 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4040 Tpr-Chr3 44989411 44991503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4040 20 140 Cytochrome P450 AT3G26300 50.413 1.90e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4040 - K13267 gmx:100808331 205.297