Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4035 ATGGCGGAAATGGCAGTGTCTTTTGCTATTGACAAACTGCTTCCATTGTTAATAGAAGAAGTCAATCTGCTCAAAGGTGTTCACAAGGAATTTGCAGACATTAAAGATGAACTGGAAAGCATGCAAGCATTCCTTAAGGATGCTGATAGAAGAGCTGCAACTGAAGGAGATATCGATAATACTAGTGAAGGAGTCAAAACATGGGTGAAACATGTGAGGGAAGCAGCTTTTCGCATAGAAGACATCATTGATGATTATTTGATCCATGTGGAACAACAACCTCTCGATGATACCACCGGGTGTGTAGCTGTACTCCATAAGATTGCTCAATTACTCAAAACTATGATCCATCAACATCAAATTGCATCTGAGATTCAAGACATCAAGTTATCTGTTCGTGGAATCAAAGAAAGAAGTAAAAGATATGGGTTCCAAATCCAAAATTCTATTGAACAAGGATCAAGAAGCTTTAGAGGAAGCCAAAATGCCAAATGGCACGACCCTCGAATGGCTTCTTTATACCTTGATGAAGCTGAAATTATAGGCTTTCAAGAACCCAAAAATGAATTAACTGGATGGTTGTTAGAGGGAAGATCTGAGCGCACGGTCATCGCTGTGGTAGGTATGGGAGGGCTAGGAAAAACCACTCTTGCCAAACAGGTTTTTAATAACAAAGAGGTAGTGGGACACTTTGATTGTCGTGTATGGATCACAGTGTCAGAATCATACTATATAGAAGGGTTGCTGAGAGGCATGTTGAATGAGCTTTACAAACAAAAAGGGGACACTCCTCCTCAAGATATCTCTCAAATGGATCGAGGGTCGTTGATTTCTGTGCTAAGAAACTACTTGCAACAAAAGAGGTATGTTTTTGTGTTTGATGATGTATGGAACATACATTTTTGGAATGAGATTGAAAATGCATGTATTGATAATAGAATGGGGAGTAAGATATTTATTACAACTAGAAAAATGGATGTTGCCAAAAATTGTCAAAAATCATCTTTTATTGAAGTGCATCAATTGCAACCTTTAACGGATGATCAATCTTTTGAGTTGTTCAAAAAGAAGACATTCCAATTTGACGACTCTGATGGATGTTGTCCAAATAAGCTCAATGATATATCTTTCAAAATTGCTAAAAAATGCAAAGGTTTACCACTAGCAATTGTTGCCATTGGTGGTCTATTGTCTACAAAAGAGAAAAATGTTATTGAGTGGCGAAGATTTTGTAAAAATATGACTTTAGAACTAAAGAAGGATTCTAATTTGATAGCTATAAACAAAATTTTAGCTTTAAGCTATGAGGATTTGCCTTTTCATCTTAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTACATAGTTCACTCAAAGACACTGATTCGACAATGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACTTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTGATCCATAGAAGTTTGGTGCAAGTATCTTCTGTTACAATTGATGGAAAAACTAAAAGTTGTTGTGTTCATGATCTAACACGTGCGATGATTCTTGAAAAGTGTGAAGATTTAAGTTTCTGCAAGAATATCAGTGGAAATGGTCATTCATCTTTATCTGGAAGTATCCGGCGCCTATCAATAACAACCCATTCCAATGATTTTATGAAACGTATTGAAAACTCACGTGTTCGATCACTATTTCTTTTCGCAGATAATTCACAACTTTTGAGCGAAGATTTTACGAGGAGAATCTTTAGAGAATATAGGCGCTTGAAGGTGCTTGAGTTTGGTGTTTTCTCTAATGTTAGATTGAGTAATATCCTTCGTGAAAATTTGGGAAGCTTGATTCACTTGAAGTATTTAAGCTTCAATATTGTTGAACTTATTAAACTTCCCGAATCAATTTCCATGCTCCAAAACCTGGAGACTTTGGATATGAGACATACCATATTTTATGACCTACCAAAGGAGGTTAGCAAGCTTAGAAAGTTACAACATCTTTTGAGCTCCGGAATGTGGATGTTTAAATTGAAGGGTGGTATAGGAGGCATGGAATCCCTACAAACTCTGAGTAGTGTGAAAATTGAAGATGGTGATGATGGAATAAAGATAATTAAAGAGCTGGGAAAGCTAAGGCAGTTAAGGAAATTGAGCTTGTTTCATGTGATGGAAGACCATATAAGCACTTTATCTTCTTCATTGAATGAGATGCAACATTTGGAGAATCTAAGCATTCTGTCAATAACCGTTACAAAAAATTGTTATGATTTAACTGATTTGCATTTGAATCCACCTCCATCTAAGCTTCGAACTCTTAAACTAATAGGAATGTTGAAGAAGTTTCCAGAATGGATTCTTCAACTTCAAAATCTTGTTAAGTTGAAGTTAGAATATACCAAGTTAATTGATGATCCAATAAAGTTGTTAGAAAACATGCAAAACTTGTTGTTCCTTTCAATCATCAAAGATGCTTATAAAGGTGAAAGTTTACATTTTCATGATGGAGGGTTTCAAAATCTAAAGGAACTACACCTCATTGGTTTGACTAACTTGTATTCAATTGTAATTGAAAAAGGAGCATTGCAATCTCTAAAAAAGTTCGAGTTATACGATATCCCCAACCTCAAGACTGTTCCTGCTGGCATCCAACACTTAGAAAAACTTCAAGTTCTCAATGTTCGAGATGTGCCACATGTAGAACTTTATCCTAAACTTTAA 2733 0.3582 MAEMAVSFAIDKLLPLLIEEVNLLKGVHKEFADIKDELESMQAFLKDADRRAATEGDIDNTSEGVKTWVKHVREAAFRIEDIIDDYLIHVEQQPLDDTTGCVAVLHKIAQLLKTMIHQHQIASEIQDIKLSVRGIKERSKRYGFQIQNSIEQGSRSFRGSQNAKWHDPRMASLYLDEAEIIGFQEPKNELTGWLLEGRSERTVIAVVGMGGLGKTTLAKQVFNNKEVVGHFDCRVWITVSESYYIEGLLRGMLNELYKQKGDTPPQDISQMDRGSLISVLRNYLQQKRYVFVFDDVWNIHFWNEIENACIDNRMGSKIFITTRKMDVAKNCQKSSFIEVHQLQPLTDDQSFELFKKKTFQFDDSDGCCPNKLNDISFKIAKKCKGLPLAIVAIGGLLSTKEKNVIEWRRFCKNMTLELKKDSNLIAINKILALSYEDLPFHLKSCLLYFGMYPEDYIVHSKTLIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRSLVQVSSVTIDGKTKSCCVHDLTRAMILEKCEDLSFCKNISGNGHSSLSGSIRRLSITTHSNDFMKRIENSRVRSLFLFADNSQLLSEDFTRRIFREYRRLKVLEFGVFSNVRLSNILRENLGSLIHLKYLSFNIVELIKLPESISMLQNLETLDMRHTIFYDLPKEVSKLRKLQHLLSSGMWMFKLKGGIGGMESLQTLSSVKIEDGDDGIKIIKELGKLRQLRKLSLFHVMEDHISTLSSSLNEMQHLENLSILSITVTKNCYDLTDLHLNPPPSKLRTLKLIGMLKKFPEWILQLQNLVKLKLEYTKLIDDPIKLLENMQNLLFLSIIKDAYKGESLHFHDGGFQNLKELHLIGLTNLYSIVIEKGALQSLKKFELYDIPNLKTVPAGIQHLEKLQVLNVRDVPHVELYPKL* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4035 910 Pfam Rx N-terminal domain 5 94 IPR041118 -
Tpr3g4035 910 Gene3D - 435 526 IPR036388 -
Tpr3g4035 910 Gene3D - 171 339 IPR027417 -
Tpr3g4035 910 Gene3D - 4 122 - -
Tpr3g4035 910 PANTHER DISEASE RESISTANCE PROTEIN RP 30 900 IPR044974 GO:0006952
Tpr3g4035 910 Gene3D Ribonuclease Inhibitor 540 702 IPR032675 -
Tpr3g4035 910 Gene3D Ribonuclease Inhibitor 703 907 IPR032675 -
Tpr3g4035 910 PANTHER - 30 900 - -
Tpr3g4035 910 SUPERFAMILY L domain-like 515 904 - -
Tpr3g4035 910 Pfam NB-ARC domain 185 437 IPR002182 GO:0043531
Tpr3g4035 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 449 IPR027417 -
Tpr3g4035 910 PRINTS Disease resistance protein signature 203 218 - -
Tpr3g4035 910 PRINTS Disease resistance protein signature 283 297 - -
Tpr3g4035 910 PRINTS Disease resistance protein signature 383 397 - -
Tpr3g4035 910 PRINTS Disease resistance protein signature 641 657 - -
Tpr3g4035 910 CDD RX-CC_like 2 137 IPR038005 -
Tpr3g4035 910 Gene3D - 344 434 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4035 Tpr-Chr3 44940453 44950129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4035 204 402 WRKY Transcription Factor Family AT5G45050 25.121 7.52e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4035 K13457 - gmx:100819372 930.243