Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4033 ATGGCCGAAATGGCCGTGTCTTTTGTTCTTGAGCAACTGATTCCACTGTTAACAGAAGAAGCCAAGCTGTTGGGAGGTATTCACAAAGAATTTGCAGACATTAAAGATGAATTTGAATGCATTCAAGCCTTCCTTAAGGATGCTGATAAAACAGTTAAAAGAGACGACACTACTGAAGGAGCCAAAACTTGGGTGAAGCAAGTTAGGGAAGCAGCTTTTCATATTGAAGATGTCATTGATGATTATCTGATCCAAGTGAGACAGGAGCCTCGTGATCCTGGATTTGTAGCTTTACTCCATAAGATTGTTCACTCACTCAAAGTTATTATCCCTCGTCATCAAATAGCGTCGAAGATTCAAGACATTAAGTCATCTCTTCGTGGGATCAAGGAAAGAAGCCAAACATATGGCTTTCAACGTTCTTTGGAACAAGGATCGAGAAGCTTCAGAGGAAGAAAAAGTGCGAAATGGGACGACCCTCGAATGGATGCTTTGTACATTGATGAAGCTGAAATGGTAGGCTTTGAAGAACCCAAAAATAAATTGATTGAATGGTTGCTAGAGGGAAGATCTGAGCGCACTGTCATCGCTGTGGTAGGTATGGGAGGACGAGGAAAAACCACTCTTGCAAAAAAAGTTTTTGACAACAAAAAGGTAGTGGGAGACTTTGACTATCGTGTATGGATCACAGTGTCACAATCATACTATACAGAAGGGTTGCTGAGAAGCATGTTGAATGAGCTTTACAAACAAGAAGGGGACACTCCTCCTCAAGATATCTCTCAAATGGATCTAGGGTCGTTGATTTCTATGCTAAGAAACTACTTGCAACAAAAGAGGTATGTTTTTGTGTTTGATGATGTGTGGAACATACATTTTTGGAATGAGATTCAAAATGCATGTATTGATAATAAAATGGGGAGCAAGATATTTATTACAACGAGAAATATGGAAGTTGCCACAAATTGTCTGAAATCATCTGTTGTTAAAGTGCATGATCTGCAACCTTTATCGGAAGTTCAATCATTTGAGTTGTTCAAAAAGAAGACATTCCAAAAAAAAGACATTCCAAATGAGCTCAAAGAGATATCTTTAAAAATTGCAAACAAATGCAAAGGTTTACCGCTGGCAATTGTTGCCATTGGCGGTCTATTGTCTACAAAAGAGAAAAGCTTACTTGAGTGGCAGAAATTTTGTGATAAATTGCCTTTAGAGCTAAAGAGGGATTCCCATTTGACCGGGATAAACCAAATTTTAGCTTTCAGCTATGATGATTTGCCTTTTCATCTTAAGTCATGTTTGTTGTATTTTGGAATATATCCTGAAGATTATGAAGTTAAATCAAGGAGACTAATTCGGCAGTGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACTTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTAATCCATAGAAGTTTGGTGCAAGTATCTTCTGTTAGAATTGATGGAAAAGCTAAAAGTTGTTGTGTTCATGATCTAACACGTGAGATGATTCTTGAAAAGTGTGAAGATTTAAGTTTCTGCAAGAATATCAGTGGAAATGGTCATTCAACTTTATCTGGAAGTATCCGGCGCCTATCAATAACAACCCATTCCGATGATTTTATGAAACGTATTGAAAAATCATGTGTTCGATCACTATTTCTTTTCACAGATAATTCACAATTTTTGAGCAAAGCTTTTATTAGGAGAATCTTTAGAGAATATAGGCGCTTGAAGGTGCTTGAGTTTGATGTTTTCTCTAATGTTAGATTGAGTAATATCCTTCGTGAAAATTTGGGAAGCTTGATTCACTTGAAGTATTTAAGCTTCAATAATTATCCTCTGAGTTATATTAAACTTCCCAAATCATTTTCCATGCTCCAAAACCTGGAGACTTTGGATATGAGACATTCCATATTTTATTACCTACCAAAGGAGGTTAGCAAGCTTAGAAAGTTACAACATCTTTTGGGCTACAGAATGTCTTTGTTTAAATTGAAGGGTGGTATAGGAGGCATGGAATCCCTACAAACTCTGAGTAGTGTGAAAATTGAAGATTGTGATGATGGAATAAAGATAATTAAAGAGCTGGGAAAGCTAAGGCAGTTAAGGAAATTGAGCTTGTATCTGGAACACCACCAAATAAGCACTTTATCTTCTTCATTGAATGAGATGCAACATTTGGAGAATCTAAGCATTCAGCCAATAACCTTTACAGAAAATTGTTTTGATTTAACTGATTTGCATTTGAATCCACCTCCATCTAAGCTTCGAACTCTTAAACTATTAGGAATGTTGGAGAAGTTTCCAGAATGGATTCTTCAACTTCAAAATCTTGTTAAGTTGGAGTTAAAATTTTCCAAATTAATTGATGATCCAATAAAGTTTTTAGAAAACATGCAAAACTTGTTGTCCCTTTCAATCAACAACGATGCTTATGAAGGTGAAAGTTTACATTTTCATGATGGGGGGTTTCAAAATCTAAAGGAACTACACCTCATTTGTTTGACTAACTTGTATTCAATTGTAATTGAAAAAGGAGCATTGCAATCTCTAAAAAAGTTCGAGTTATCCTTTATCCCCAACCTCAAGACTGTTCCTGCTGGCATCCAACACTTAGAAAAACTTCAAGTTCTCAATGTTCGACATGTGCCACATGAAGAACTTTATCCTAAACTTTAA 2700 0.3637 MAEMAVSFVLEQLIPLLTEEAKLLGGIHKEFADIKDEFECIQAFLKDADKTVKRDDTTEGAKTWVKQVREAAFHIEDVIDDYLIQVRQEPRDPGFVALLHKIVHSLKVIIPRHQIASKIQDIKSSLRGIKERSQTYGFQRSLEQGSRSFRGRKSAKWDDPRMDALYIDEAEMVGFEEPKNKLIEWLLEGRSERTVIAVVGMGGRGKTTLAKKVFDNKKVVGDFDYRVWITVSQSYYTEGLLRSMLNELYKQEGDTPPQDISQMDLGSLISMLRNYLQQKRYVFVFDDVWNIHFWNEIQNACIDNKMGSKIFITTRNMEVATNCLKSSVVKVHDLQPLSEVQSFELFKKKTFQKKDIPNELKEISLKIANKCKGLPLAIVAIGGLLSTKEKSLLEWQKFCDKLPLELKRDSHLTGINQILAFSYDDLPFHLKSCLLYFGIYPEDYEVKSRRLIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRSLVQVSSVRIDGKAKSCCVHDLTREMILEKCEDLSFCKNISGNGHSTLSGSIRRLSITTHSDDFMKRIEKSCVRSLFLFTDNSQFLSKAFIRRIFREYRRLKVLEFDVFSNVRLSNILRENLGSLIHLKYLSFNNYPLSYIKLPKSFSMLQNLETLDMRHSIFYYLPKEVSKLRKLQHLLGYRMSLFKLKGGIGGMESLQTLSSVKIEDCDDGIKIIKELGKLRQLRKLSLYLEHHQISTLSSSLNEMQHLENLSIQPITFTENCFDLTDLHLNPPPSKLRTLKLLGMLEKFPEWILQLQNLVKLELKFSKLIDDPIKFLENMQNLLSLSINNDAYEGESLHFHDGGFQNLKELHLICLTNLYSIVIEKGALQSLKKFELSFIPNLKTVPAGIQHLEKLQVLNVRHVPHEELYPKL* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4033 899 Gene3D - 423 514 IPR036388 -
Tpr3g4033 899 Pfam Rx N-terminal domain 5 93 IPR041118 -
Tpr3g4033 899 Gene3D - 4 116 - -
Tpr3g4033 899 PRINTS Disease resistance protein signature 195 210 - -
Tpr3g4033 899 PRINTS Disease resistance protein signature 275 289 - -
Tpr3g4033 899 PRINTS Disease resistance protein signature 371 385 - -
Tpr3g4033 899 PRINTS Disease resistance protein signature 853 869 - -
Tpr3g4033 899 Gene3D - 336 422 IPR042197 -
Tpr3g4033 899 SUPERFAMILY L domain-like 502 892 - -
Tpr3g4033 899 CDD RX-CC_like 2 131 IPR038005 -
Tpr3g4033 899 Pfam NB-ARC domain 176 425 IPR002182 GO:0043531
Tpr3g4033 899 Gene3D - 162 332 IPR027417 -
Tpr3g4033 899 PANTHER - 31 887 - -
Tpr3g4033 899 Gene3D Ribonuclease Inhibitor 549 899 IPR032675 -
Tpr3g4033 899 PANTHER DISEASE RESISTANCE PROTEIN RP 31 887 IPR044974 GO:0006952
Tpr3g4033 899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4033 Tpr-Chr3 44933568 44937104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4033 196 390 WRKY Transcription Factor Family AT5G45050 27.692 7.81e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4033 K13457 - gmx:100819372 888.641