Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4032 ATGGTTTCCTGTCTATTTCTATGTTATGTTGGATGTTCTATTAACAATATGACTAAACTTAGCCCTCTTGAAGAGTCCCTTTTGAATGGTGAAGCTAGTGTAAACAAGGATTCTGATGCCAAAAACACACTAAAATCCTGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGAGTCCACTAATAACTTTAGGCAGTAAAAAGACTTTAGACCATGAAGACCTTCCACTGCTTTCTACTAACGACAGTGCCTATGGAACTTTTTCAACTTTTAAAAAAAAGCTTGAGTTGGAGTGTGGTAATGTTAGGAATTTGACCACTATTAACCTCACCAAGGTTTTGTTCTTCTCAACTTGGCAAGGGATTCTTCTATCTGGCTTTTTTGCATTCTTGTTCGTATGTGCTTCTTTTGTTGGACCCTACCTTATAGACAATTTTGTGCAATACCTCAATGATGAAAACAAAGCTAAAAATGAAGGCTATATTTTGGCTATGATGTTTGTTGCGGCAAATCTTGTCGACTCTCTTTGTCAGAAGCACTTTATATTTAAGATCCAACAGGTTGGTGTTCAGATGCAATCAATGTTGGTGTCAATGATCTATACTAAAGGTTTGACTCTTTCGTGTCAATCGAAAGCGGAACACAGTAGCGGCGAAATCATCAACTTATTGACGGTTGATGCTGAAAGGATAGGTGAATTTTGTTGGTACATGCATGATATATGGATGGCTGTTCTTCAAGTTTCTTTGGCTTTGTTTATTCTTCATAGAAGTGTAGGGGTTGCTTCAGTAGCTACTTTTGCCGCCACCGTAGTTGTGATGTTGCTAAACCATCCTATCGCATCATTGCAAGAGAAATTCCAAGGTAAGTTAATGGAGTTCAAAGATAAAAGAATGAAGGCGACGTCTGAGATTCTAATGAACATGAGGATTCTCAAACTGCAAGCGTGGGAGATGAAGTTCTTATCAAAGATCATTCAGATTAGGAAGTTAGAGGAGATTTGGCTAAAGAAATTTCTTGTTGGTTCAGCAATTGTTAGATTTCTGTTTTTTAATGCGCCGACATTTATTGCTGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATTCCACTTGAATCAGGAAAGATCTTATCTGCACTTGCAACATTCAGAATTCTTCAACTGCCTATTTATAGTCTTCCCGACACAATTTCAGTGATTGCAGAAACCAAGGTTTCTGTAGATAGGATTGCTGCGTTTCTTCGTCTAGATGATTTGCAGGCCGATGTAGTGGAAAAGATTCCACGCAGTAGTTCTGATATAGCAATTGAAATTGAATATGGAAATTTCAGTTGGGATTTATCTTCTGTCAATACAACGTTGAAAAACATAAATCTTAGAGTTTCTCATGGAATGAGGGTTGCAGTTTGTGGTACTGTTGGATCAGGAAAGTCTAGTTTACTTACTTGTATAATAGGGGAAATGCCAAAGCTATCTGGAACCTTGAAGGTGTGTGGAACAAAGGCTTATGTTGCTCAATCGCCATGGATACAGAGTGGGAAGATAGAAGAAAATATACTCTTTGGTAGAGAAATGGATAGGGAAAAGTATGAGAGGGTACTAGATGCATGTTCATTGAATAAAGACTTAGAGGTTTTACCATTCGGTGATCAGACCATTATTGGAGAAAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTGTACCAAGATGCTGATATATATCTGCTCGATGATCCCTTTAGTGCTGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTAACCTTCTGAAAACAAAAACTGTGATATACATAACACATCAAGTAGAGTTCTTGCCTGATGCTGATCTGATACTGGTCATGAAAGATGGAAGGATAATTCAATCAGGAAAATACAATGACCTTCTTACGTCCGGAACAGAGTTTATGGAACTTGTAGGTGCACATAGAGCAGCATTGTCTTCAGTAAAGTCCTTAGAGAGAAGGAATACATTTAAAGAATCGAGTATTACTGGGGAAGACACAGGTTTATTAAGTGATTTTGAACTTGAGCAAGAAGTGGAAAACATAGATGATCGAAATGGCAAGTTAGATTACACAGTTGAACAGAAAGGCCAACTTGTTCAAGATGAAGAACGGGAAAAGGGTACAATTGGACTTAAAGTGTTCTGGACATACATCACAATAGCTTATGGAGGAGCCCTTGTACCTTTTATATTTCTTTCACAGATACTCACTGTGGTTTTACAGATCGCAAGCAATTATTGGATGGCATTGGCAACTCCTGTTTCCGCAACTGCAGAACCAAATATTGGAAGCCTTACTCTTATGGTTGTCTATGTTTCTTTATCAATTGGAAGTTCTTTTGCCACCCTTGCCAGAACAGTTCTTGCAGTTATATCTGGATACAAGACTGCCACCTTGCTCTTCAATCAAATGCATTCCAGCTTTATTCGAGCACCGATGTCTTTTTTTGACTCCACACCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAAGTGCAATAGATATGAGCATTTCAAATCTAGCATGGGCATTTACCTACCGTGTGGTTCAGCTCTTTGGAAATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTGATTATAGTATTGATTCCTGTCGTGGCAGCCAGCATATGGTACCAGCGATACTACTCGGCATCAGCACGCGAATTGGCACGATTAACTGGTATATGCCAAGCTCCAGTTATTCAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAGTTATACAGTGGTAGTGCAAAGGAATGGCTGAGTTTCAGATTGGATCTTTTATCCATTACAGTATTTGCGTCCTGCTTGGTTTTCTTAGTGTCTTTTCCAAGTTCAATAACTAATGCTAGTATTGCGGGATTGGCTGTGACATACGGGATTAACCTATGCGAAATACAATCTGATTTAATTCGGTTTTTTTGCAACTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACTTCCATCCCAAGTGAAGCACCTCTTGTAATAAAAGAAAACCGACCAGATCATTCTTGGCCATCGTTAGGAGAGGTTCATATTCAGGATTTACAGGTTCAATATGCACCTCACTTGCCTCTTGTTTTACGTGGACTAACATGCACTTTTACTGCTGGAGCAAAAACTGGCATTGTTGGAAGAACCGGAAGTGGAAAATCAACACTAGTGCAAACACTTTTCAGACTTGTTGAACCTGTTGCAGGACAAATATTGATAGATAAGATCAACATCTCATTGATTGGAATCCATGATTTAAGGTCAAGATTAAGCATAATTCCTCAGGATCCAACAATGTTTCAAGGGACAGTAAGAAGCAACCTAGACCCGCTTGAAGAGCACACAGACGAACAGATTTGGGAGGCTTTAGATATGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTTGACTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAGTTGGTTTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTCGATGAAGCGACTGCATCAGTTGATACAGCTACAGATAATATAATTCAGCAGACTGTTAATCAACATTTCACTGATTGCACAGTTATTACCATTGCTCACAGAATAACTTCAATCCTCGATAGTGACATGGTTCTGTTTCTTAGCGAAGGGCTTATTGAAGAATTTGATTCACCAAAGAAGCTGCTTAAAGATAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAACACTGGTTTTGGTAGTTGA 3954 0.3877 MVSCLFLCYVGCSINNMTKLSPLEESLLNGEASVNKDSDAKNTLKSCYSNAGFFSILTFSWMSPLITLGSKKTLDHEDLPLLSTNDSAYGTFSTFKKKLELECGNVRNLTTINLTKVLFFSTWQGILLSGFFAFLFVCASFVGPYLIDNFVQYLNDENKAKNEGYILAMMFVAANLVDSLCQKHFIFKIQQVGVQMQSMLVSMIYTKGLTLSCQSKAEHSSGEIINLLTVDAERIGEFCWYMHDIWMAVLQVSLALFILHRSVGVASVATFAATVVVMLLNHPIASLQEKFQGKLMEFKDKRMKATSEILMNMRILKLQAWEMKFLSKIIQIRKLEEIWLKKFLVGSAIVRFLFFNAPTFIAVVTFGTCVLIGIPLESGKILSALATFRILQLPIYSLPDTISVIAETKVSVDRIAAFLRLDDLQADVVEKIPRSSSDIAIEIEYGNFSWDLSSVNTTLKNINLRVSHGMRVAVCGTVGSGKSSLLTCIIGEMPKLSGTLKVCGTKAYVAQSPWIQSGKIEENILFGREMDREKYERVLDACSLNKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLNLLKTKTVIYITHQVEFLPDADLILVMKDGRIIQSGKYNDLLTSGTEFMELVGAHRAALSSVKSLERRNTFKESSITGEDTGLLSDFELEQEVENIDDRNGKLDYTVEQKGQLVQDEEREKGTIGLKVFWTYITIAYGGALVPFIFLSQILTVVLQIASNYWMALATPVSATAEPNIGSLTLMVVYVSLSIGSSFATLARTVLAVISGYKTATLLFNQMHSSFIRAPMSFFDSTPSGRILNRASTDQSAIDMSISNLAWAFTYRVVQLFGNVAVMSQAAWQVIIVLIPVVAASIWYQRYYSASARELARLTGICQAPVIQHFSETISGSTTIRSFEQESRFNEMNMQLIDKYSQPKLYSGSAKEWLSFRLDLLSITVFASCLVFLVSFPSSITNASIAGLAVTYGINLCEIQSDLIRFFCNLENKIISVERILQYTSIPSEAPLVIKENRPDHSWPSLGEVHIQDLQVQYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLVEPVAGQILIDKINISLIGIHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEHTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVNQHFTDCTVITIAHRITSILDSDMVLFLSEGLIEEFDSPKKLLKDKSSSLAQLVAEYTRRSNTGFGS* 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4032 1317 CDD ABCC_MRP_domain1 441 641 - -
Tpr3g4032 1317 CDD ABC_6TM_ABCC_D1 128 415 IPR044746 GO:0140359
Tpr3g4032 1317 CDD ABC_6TM_ABCC_D2 752 1046 IPR044726 GO:0140359
Tpr3g4032 1317 Pfam ABC transporter transmembrane region 754 997 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g4032 1317 Pfam ABC transporter transmembrane region 127 393 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g4032 1317 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 754 1034 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g4032 1317 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 21 1316 - -
Tpr3g4032 1317 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 127 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g4032 1317 Gene3D ABC transporter type 1, transmembrane domain 714 1052 IPR036640 GO:0005524|GO:0016021
Tpr3g4032 1317 Gene3D ABC transporter type 1, transmembrane domain 111 418 IPR036640 GO:0005524|GO:0016021
Tpr3g4032 1317 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 21 1316 - -
Tpr3g4032 1317 SMART AAA_5 1097 1289 IPR003593 -
Tpr3g4032 1317 SMART AAA_5 468 649 IPR003593 -
Tpr3g4032 1317 SUPERFAMILY ABC transporter transmembrane region 123 419 IPR036640 GO:0005524|GO:0016021
Tpr3g4032 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 663 IPR027417 -
Tpr3g4032 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1063 1296 IPR027417 -
Tpr3g4032 1317 SUPERFAMILY ABC transporter transmembrane region 752 1053 IPR036640 GO:0005524|GO:0016021
Tpr3g4032 1317 Gene3D - 1054 1307 IPR027417 -
Tpr3g4032 1317 Pfam ABC transporter 459 593 IPR003439 GO:0005524
Tpr3g4032 1317 Pfam ABC transporter 1089 1236 IPR003439 GO:0005524
Tpr3g4032 1317 ProSitePatterns ABC transporters family signature. 566 580 IPR017871 GO:0005524
Tpr3g4032 1317 Gene3D - 419 686 IPR027417 -
Tpr3g4032 1317 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 443 664 IPR003439 GO:0005524
Tpr3g4032 1317 CDD ABCC_MRP_domain2 1069 1289 - -
Tpr3g4032 1317 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1071 1305 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4032 Tpr-Chr3 44920793 44929241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4032 441 685 Calmodulin-binding Proteins AT2G36910 30.682 1.02e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4032 - K05666 gmx:106794105 2014.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0178 4 1964733 1971686 Tpr3g4032 3 44920793 44929241 PCT