Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4027 ATGGGGTTGGAGCTTCATATTCTCATATCAACCCTTGGTTTTCTCTTGTTCATAGTAATCAAAATTACATGGAAATCAAAAGCTAAGAAAACAAATTCCAAATTGCCACCAGGACCAAGAAAACTTCCACTCATAGGGAACATCCATCAACTTGGAGCCTTACCTCATCAATCCCTAGCAAAATTAGCACAACAATATGGACCTCTCATGCACATGAAGCTTGGTGAACTTTCTTGCATAGTTGTTTCATCTCAAGAAATGGCTAAAGAAGTGATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCCACTTCTTGCAGCAGAAATAATCACTTATGGATATAAAGGAATGACTTTTTCTCCACATGGATCCTATTGGAGACAAATGAGGAAGATTTGTACTATGGAGCTTTTATCACAAAAGCGCGTCGAATCTCTTCGATCACTAAGGGAAGAAGAAATAGCAAATCTTGTCAAAGATATAACTTTGAGTGAAGGGTCACCTATAAATATTAGTGAGAAGCTTGATTCATTTGCTTATGGATTAACTTCAAGAACAGCTTTTGGTGCACAAATTGAAGGTAAAGAAAAGTATAGGAAACTTATGAAAGATGTATCGAAGATGGCTGGAGGGTTTTCTCTAGCAGATTTGTTTCCTTCAATTGGAATTCTTCAAGTTCTTACAGGATTAAGGCAAGGAATTGAGAAGCTTCATAAGGAAATGGATGAGATACTAGAGAATGTTGTAAGAAATCATAAACAAAAGAATTTGGAAACTAAGGACAAGGAAGAAACAGGGGAGGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGGACAATGATTTGGAACATCCCTTATCAGACAACGTTGTCAAAGCAACAATTCTGGATATCTTTAGTGCCGGAAGCGACACCACATTTACCATTTTAGAATGGGCAATGTCAGAATTGATTAAAAATCCACAAGTGATGCATAAAGCACAAGTTGAAGTAAGAGGTGTCTATAATGAAAAAGGGTATGTCGATGAACCAAATCTCCACAAGCTCATATACCTGAAATCAGTTATAAAAGAAACGATGCGTTTACATGCACCAGTTCCATTGTTACTTCCAAGACAATGCAGTGAAAAATGTAAAATTAATGGATATGAAATACCAGTCAAAAGTAAAGTCATTGTTAATGCATGGTCAATAGCTAGAGATTCAAGATTTTGGATCGAAGGTGAGAAATTTGTTCCAGAAAGATTCATTGATAGCTCAGTTGATTACAAAGGTGTGGATTTTCAGTTTATTCCATTTGGTGCTGGAAGAAGAATTTGTCCTGGTATGATGTTTGGTATTGCTAACTTGGAAATCTCACTTGCAAATTTACTTTACCATTTTGATTGGAAAATGGCAAATGGGGATAAGGCTGATGAACTCGACATGACTGAATCGTTTGGATTAACCGTAAGAAGAAAACATGATTTGTGGTTGGTTCCCACTATTTACCATAGCTCATGTTAA 1509 0.3638 MGLELHILISTLGFLLFIVIKITWKSKAKKTNSKLPPGPRKLPLIGNIHQLGALPHQSLAKLAQQYGPLMHMKLGELSCIVVSSQEMAKEVMKTHDLNFANRPPLLAAEIITYGYKGMTFSPHGSYWRQMRKICTMELLSQKRVESLRSLREEEIANLVKDITLSEGSPINISEKLDSFAYGLTSRTAFGAQIEGKEKYRKLMKDVSKMAGGFSLADLFPSIGILQVLTGLRQGIEKLHKEMDEILENVVRNHKQKNLETKDKEETGEDLVDVLLKLQKDNDLEHPLSDNVVKATILDIFSAGSDTTFTILEWAMSELIKNPQVMHKAQVEVRGVYNEKGYVDEPNLHKLIYLKSVIKETMRLHAPVPLLLPRQCSEKCKINGYEIPVKSKVIVNAWSIARDSRFWIEGEKFVPERFIDSSVDYKGVDFQFIPFGAGRRICPGMMFGIANLEISLANLLYHFDWKMANGDKADELDMTESFGLTVRRKHDLWLVPTIYHSSC* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4027 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Tpr3g4027 502 Coils Coil 228 248 - -
Tpr3g4027 502 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PANTHER CYTOCHROME P450 71B11-RELATED 8 499 - -
Tpr3g4027 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 499 - -
Tpr3g4027 502 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4027 502 Gene3D Cytochrome P450 27 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4027 Tpr-Chr3 44827586 44830371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4027 6 498 Cytochrome P450 AT3G26300 41.833 7.91e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4027 - K23806 gmx:100819247 697.967