Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4026 ATGGGGTATGAGCTTCAAGTTATCATATCATCTATCCTTGGTTTCCTTTTGTTCATACTAATAAAAATTACATGGAAATCAACAACCAAGAAAACAAACTCCAAATTACCACCAGGACCAAGAAAGCTTCCTCTCATAGGGAACATCCACCAGCTTGGAGCCTTACCTCATCAATCCCTAGCAAAATTAGCACAACAATATGGACCTCTCATGCATATGCAGCTTGGTGAACTTTCTTGCATAGTTTTTTCATCTCAAGAAATGGCTATAGAGGTAATGAAAACACATGATCTCAACTTTGCAAATAGGCCACCACTTCTTGCAGCTGAAATAATATCTTATGGATTTAAAGGTATGACTTTTTCACCACATGGATCATATTGGAGGCAGATGAGAAAGATTTGTACTATGGAGCTATTATCACAAAAGCGCGTTGAATCTTTTCGATTACAAAGGGAAGAAGAATTGGCAAATTTTGTTAAAGATATAATTTTGTGTGAAGGGTCATCTATAAATCTTAGTGAGAAGCTTGATTCATTGGCTTATGGATTAACATCAAGAGAAGCTTTTGGTGCAAAAGTTGAAGATAAAGAAAAGTTTAGGAAACTTATGAAGGATCTTTCAAAGATAGCTGCAGGGTTTTCTTTGGCTGATTTGTATCCTTCAATTGGAATTCTTCCAGTTCTTACAGGATTAAGGCGAAAAATCGAGAAGATTCATAGAGAAACAGATAAGATACTAGAGAACATTATAAGAAGTCATAGAGAAAAGAATTTAGAAACAAAGGCTGAGGAAGAAACAGGGGAGGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGGATGGTGATTTGGAACATCCCTTATCAGACAACGTTGTGAAAGCAACAATTTTGGATATTTTCGGTGCTGGAAGCGACACTACATTCACAATTCTAGAATGGACAATGTCAGAATTAATTAAAAATCAACTTGTAATGAAGAAAGCTCAAGCTGAAGTAAGAAGTGTGTATAACGAAAAAGGCAATGTGGATGAAATAAGTCTTCACAAGCTGAAATACTTGAGATCAGTTATTAAAGAAACACTACGTTTACATCCACCAGGTCCATTGTTACTTCCAAGAATATCTAGTGAAAAATGTGAAATTAATGGTTATGAAATACCAGCCAAAAGCAAGGTAATTGTTAATGCATGGTCAATATGCAGAGATTCAAGATATTGGATTAATGCTGAGAAATTTTATCCAGAAAGGTTCATTGATTGTTCAGTTGATTACAAAGGTGCTGATTTTCAGTTTATACCATTTGGTGCTGGGAGAAGGACATGTCCTGGCATATCATTTGGTATTGCTAACTTAGAAATTTCACTTGCAAATTTGCTTTTCCATTTTAATTGGAATATGCCTAATGGATACAAGGCTAATGACCTTGACATGACAGAATCTTTTGGGTTGACTGTTAGAAGAAAACATGATTTGTGGTTGGTTCCCACCACTTATCAATCTAGTTAA 1509 0.3539 MGYELQVIISSILGFLLFILIKITWKSTTKKTNSKLPPGPRKLPLIGNIHQLGALPHQSLAKLAQQYGPLMHMQLGELSCIVFSSQEMAIEVMKTHDLNFANRPPLLAAEIISYGFKGMTFSPHGSYWRQMRKICTMELLSQKRVESFRLQREEELANFVKDIILCEGSSINLSEKLDSLAYGLTSREAFGAKVEDKEKFRKLMKDLSKIAAGFSLADLYPSIGILPVLTGLRRKIEKIHRETDKILENIIRSHREKNLETKAEEETGEDLVDVLLKLQKDGDLEHPLSDNVVKATILDIFGAGSDTTFTILEWTMSELIKNQLVMKKAQAEVRSVYNEKGNVDEISLHKLKYLRSVIKETLRLHPPGPLLLPRISSEKCEINGYEIPAKSKVIVNAWSICRDSRYWINAEKFYPERFIDCSVDYKGADFQFIPFGAGRRTCPGISFGIANLEISLANLLFHFNWNMPNGYKANDLDMTESFGLTVRRKHDLWLVPTTYQSS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4026 502 SUPERFAMILY Cytochrome P450 37 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 500 - -
Tpr3g4026 502 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 Gene3D Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4026 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tpr3g4026 502 PANTHER CYTOCHROME P450 71B11-RELATED 8 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4026 Tpr-Chr3 44805188 44809225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4026 13 499 Cytochrome P450 AT3G26300 39.919 7.73e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4026 - - gmx:100776770 667.922