Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4020 ATGATGGATCTTCAAATCCTATACTTTACATCCATTTTCTCCCTTTTTATTTTTGTGTTCATAGCAAACAAAATAGTAACCAAGAAATTTAACTCAACTCCAAATTTACCACCAGGTCCATTGAAGCTACCTATCATAGGAAACATACACAACCTTATTGGTTCACTTCCCCATCATAAGCTAAGAGATTTATCAACAAAATATGGACCTTTAATGCATCTAAAACTTGGTGAAGTTTCAACAATTGTAGTTTCATCATCAGAATATGCAAAAGAAGTGTTGAAAACACATGATCTTGTATTTGCATCAAGGCCTCCAATTCTAGCTTCAAAGATAATGAGTTATGATTCCCTTGGTATGTCTTTTGCACCTTATGGTGATTATTGGAGACAACTTAGAAAAATTTGTACTTTAGAACTATTAAGTTCAAAACGTGTCCAATCTTTTCAACCAATTAGAAGTGAAGAGATAAGCAATCTAATAAAATCGATTGCTTCAAAAGAAGGATCACAAATTAATCTCACCAAAGAAGTGTTTTCAACAATATTTACAATCACTTCAAGACTAGCCTTTGGAAAAAAGTGTAAGGAAAATCAAAAATTCATTTCGGTCGTAAAGGAAGCCGTGGAGGTTGCCGGAGGTTTTGAGTTGGGAGATTTGTTCCCTTCATTTAAATGGCTTCAACATATGTCTGGATTGAAGCCTAAGCTTGAAAAGTTGCACAAACAAGCTGACAAGATAATGCAAAACATTATTGATGACCATAGGGAGGCTAATAAATCAAGGGTCAATGAAGATGAAGGTGAAAAAGTTGAGGAAGATCTTATAGATGTGCTATTGAATCAGGATTGTTTAACTGATAATAGTGTCAAGGCAGTCATCTTGGATATGTATGGAGGTGGAAGTGAGACATCAGCTGCTACCATAGTATGGGCTGTGGCAGAGATGATTAAAAATCCAAGAATCATGGAGAAGGTACAAGCAGAGGTAAGAGAGGCATTTGATAAAGAAAAAATAACCAAAGAAAGTGACATAGATAAGTTAAAATATTTAAAATATGTTGTAAAAGAGACATTGAGATTACACCCTCCAGGTGCATTTTTGCTTCCAAGAGAGTGCGGACAAGCATGTCAGATAAATGGATATGATATACCTTTTAAAAGCAAAGTCATCGTGAATGTTTGGGCCATTGGAAGAGATCCAAACCATTGGACTGATCCAGAAAAGTTTTATCCTGAAAGGTTCATTGAAAATATTGTAGACTATAAGGGTAATAATTATGAGTACATTCCATTTGGCTCTGGTAGAAGAATATGCCCGGGGATCACATTTGGTTTAGCCAATGTTGAATTTTCCCTTGCATTGTTGATGTATCACTTTGATTGGAAACTTCCCATTGGAGTGAAGAAAGAAGATTTAGACATGAGTGAGACTTTTGGAGTAACTATGGCTAAAAAAGAAGATTTATACCTTATTCCTTCCACTTATCATCCTTAG 1497 0.3514 MMDLQILYFTSIFSLFIFVFIANKIVTKKFNSTPNLPPGPLKLPIIGNIHNLIGSLPHHKLRDLSTKYGPLMHLKLGEVSTIVVSSSEYAKEVLKTHDLVFASRPPILASKIMSYDSLGMSFAPYGDYWRQLRKICTLELLSSKRVQSFQPIRSEEISNLIKSIASKEGSQINLTKEVFSTIFTITSRLAFGKKCKENQKFISVVKEAVEVAGGFELGDLFPSFKWLQHMSGLKPKLEKLHKQADKIMQNIIDDHREANKSRVNEDEGEKVEEDLIDVLLNQDCLTDNSVKAVILDMYGGGSETSAATIVWAVAEMIKNPRIMEKVQAEVREAFDKEKITKESDIDKLKYLKYVVKETLRLHPPGAFLLPRECGQACQINGYDIPFKSKVIVNVWAIGRDPNHWTDPEKFYPERFIENIVDYKGNNYEYIPFGSGRRICPGITFGLANVEFSLALLMYHFDWKLPIGVKKEDLDMSETFGVTMAKKEDLYLIPSTYHP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4020 498 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 SUPERFAMILY Cytochrome P450 37 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 Gene3D Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PANTHER CYTOCHROME P450 71D9 9 497 - -
Tpr3g4020 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Tpr3g4020 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4020 498 PANTHER CYTOCHROME P450 71B11-RELATED 9 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4020 Tpr-Chr3 44737449 44740041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4020 5 496 Cytochrome P450 AT3G26300 43.615 4.33e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4020 - K13267 gmx:100813216 739.184