Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4002 ATGAATCAATCGGGTAATTCAAAAATTAGCTCTGAATTTCCAATGGCTTTCCCTCCTTATCGTCCATCTCACTTCCGTAGTCAAACTTACTACACTCTTGTTCGTATTCTCACTCATCTTTCTCCTTCCACCGTTCCCACTCAACCCCTCAATCTTCCTGATAATAATGGCAATGTTGGAATGGGGCAAGAAAAGGAGCCTGAGTGCTCTGAGTTGAAAGTTGGTTCTGATGTTAAGGATCCCAAGGGTCCAGTACCCTTGGAGGATACCATTGGAAGTGTTGGAGACAAGGACAAGGATTTGAGTGCCACCGCTATGGTCCTAGATGATATAGAATTTCTGATGGGAAGTGAGGAACCATCTACACAAACAAATGATTTTCAATGCGAGCAGAAATTAATGGACGAGTTGGAGCTGGTTATGAAAGGGATTGAAGATCCTGTTTGTGATAATGGTTTAATCCCCTTGAACTGTGAGAAACAAAATAGTGGTAGTGAAGTTGATTTGATGGATTACCAAGTAGAAGAACATGTTGAATTTCTGCAGTCTGGAACAAACACGTCTGAAAGTGTAAGTGAGGTGTTGACACAAGTACAAGGGGAGCATAATGAACTTGCCTCCGAAGGATTTCATGTGTTAGAGTCAACAAAGGAACACGCTTCCAATTCCGTAATTAGTACATCAAGAATAGAGAATGATAGTCAACAGAAGGAAACAGAATTGGTGAATCCGGCTTCTCCTGTAGCGGTCTCACTTCCTACTATACAAGAGGATGAATTTGAGAAGGAAGAACAGGATGGTCATAAGGTTGTTGAAGAAACTCATAGTTCTTTAGATCTTGATACAAATATTGAAGCATTGAATATGGCAGAAAATGGTGGATTACTAGATTCATCAATTATGAAAGATAAATTCGAAACAGAAAATGAAGAGAAATCAGATAAGTTAATTTGTGTCAGAAATACAACAAATTCTTCTGATATTCTGATTGAAGGAGATCTAGAAGAGGGAGAAATTTCTGGATATTTTGCAATGGATGAAAACACTTTTGATGTGTCTTCTGCGGATGATATTGTTTCAGAACAGATGAAAGTGGATGAAATTCAGAAAGCCGGGAATTCATTTGGAAACACGATACCTCCTTTAAATATGGGTCTCTCCTTTCAAGGTTTTCCATCTAATCTTTTAACGGTAAATGCAATTCAAGATTCCAATAGCAATGGACAAGTGCAACCTAGGACTATCAATGCCATACCAACAAATTTAACCCAAAATCAAGTCTTGCACAAAGGATTCATGGAAGAAACTGCTATCAAATATCACAAGAACTCGTCTGCAGCAGCACAGATGGCTGATGCCAGCAGAAAGGAACAAAGTAGTCCTGGCCCTAAGAAGAAGAAAAACAAAAAGGAAGTGCTCGATGCCAGTAGAAAACGAAAACATGTTCCTGATTCTGAGAAGGAAGATGGAATGAAGGAAGATGAAAATAAGATGGTTGATGCCAGTGGACGTAAACGTGGTCCTGGTTCTCAGGAGAAGAAAACTAGAAAGAAGGAGAAGTATCGAAATAACAGAGCAAAAAAGAACAGAGAACTAGGTGTTAAAAAGTTGAAGTTCATTCCAGTACAAAAACCAAAAATTGTTACATTTTGTCGCCATTATATGCAAGGAAGGTGCAACGAGGGTGACAAATGCAATTTCTCACATGATACTGTTCCTTCAACAAAGTCCAAGCCATGTTTTCACTTTGCTCGCCACTCTTGTATGAAAGGAGATGATTGCCCATATGATCATCAGCTCTCCAAGTATCCTTGTTCCAATTTTGTGTCTAAAGGCTCTTGTAGTAGAGGCAATGCTTGTATGTTTTCACACAAGGTGCCAACCAACCAAGATATGCCTACGCCTACAAATGCTTGCAAACCAGAGTTGAAGTCTCCTCTTTCGTTGGGAAATACAAATTTCAGTACCCCACTTAATAATCATGGCAATAGTTCTGTCCAGCGAAACCACTTCACCAATTCTAAGGGAATTTATTCTCACACCAATGTAGAACATAAGGTGACAGACACTTCGCAGACAAAGCCAACCTCAGTACCCAAAGGAATTAGATTCATAAATGTTGCCAACATATCACCTAGTACGCCAAAACAAGACACGGTAACACCAAACAAGGGAAGTGTTGGCAGCACTGGGACGTGTGCAGATAAAGGTCAAAATACTGTGGAAGTTCCTAAGAAATTTCCAGCTGCCACACCTAAGGGAATTAACTTTCTTTCTTTCGGCAAAAGTTCTGTTTGCAGTTTTAAAAGTTCTATTCAATCCACTACAGAAGGAAAGATATTGAAGTTGCCTCAGTCAGTCAATTTTGGTTTGTCTGAACATTCAATTTCATCTCTGAATAAGGATGATTATGGAAAAGCCAGTGACAGAACTGCAGAAAGTTTACCACAAACTGCGCTATTCTCACATGACATTTTAGACAAAAATCAATCCATGGCAGACCGAATGAAATCAAAGTTTCTAAGGAAAGATTCAACCGATGATTCTGTGAGGGATCACGGCCATTGTAAATCAGTTCTAGAAGGAAAAAAAGCATCCGATAATTCTCAGACTTCAACTGTGACCTCAGCTACGCTTCTTGCTCGTCCGTTTGCTTCACAGCAGTCTTCAGATGGTGTACTATCTGGATATCATAAACAAGCATCAAACTTAGGCCAAAGGGCACTCTTGTCGACTTTAGCTTTTGCAGCAGAGCATGAATCAGGTATTAAGATGAAGTGCCCTACTGGTGTTTCACCTGTATAA 2805 0.3968 MNQSGNSKISSEFPMAFPPYRPSHFRSQTYYTLVRILTHLSPSTVPTQPLNLPDNNGNVGMGQEKEPECSELKVGSDVKDPKGPVPLEDTIGSVGDKDKDLSATAMVLDDIEFLMGSEEPSTQTNDFQCEQKLMDELELVMKGIEDPVCDNGLIPLNCEKQNSGSEVDLMDYQVEEHVEFLQSGTNTSESVSEVLTQVQGEHNELASEGFHVLESTKEHASNSVISTSRIENDSQQKETELVNPASPVAVSLPTIQEDEFEKEEQDGHKVVEETHSSLDLDTNIEALNMAENGGLLDSSIMKDKFETENEEKSDKLICVRNTTNSSDILIEGDLEEGEISGYFAMDENTFDVSSADDIVSEQMKVDEIQKAGNSFGNTIPPLNMGLSFQGFPSNLLTVNAIQDSNSNGQVQPRTINAIPTNLTQNQVLHKGFMEETAIKYHKNSSAAAQMADASRKEQSSPGPKKKKNKKEVLDASRKRKHVPDSEKEDGMKEDENKMVDASGRKRGPGSQEKKTRKKEKYRNNRAKKNRELGVKKLKFIPVQKPKIVTFCRHYMQGRCNEGDKCNFSHDTVPSTKSKPCFHFARHSCMKGDDCPYDHQLSKYPCSNFVSKGSCSRGNACMFSHKVPTNQDMPTPTNACKPELKSPLSLGNTNFSTPLNNHGNSSVQRNHFTNSKGIYSHTNVEHKVTDTSQTKPTSVPKGIRFINVANISPSTPKQDTVTPNKGSVGSTGTCADKGQNTVEVPKKFPAATPKGINFLSFGKSSVCSFKSSIQSTTEGKILKLPQSVNFGLSEHSISSLNKDDYGKASDRTAESLPQTALFSHDILDKNQSMADRMKSKFLRKDSTDDSVRDHGHCKSVLEGKKASDNSQTSTVTSATLLARPFASQQSSDGVLSGYHKQASNLGQRALLSTLAFAAEHESGIKMKCPTGVSPV* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4002 934 PANTHER PROTEIN SUPPRESSOR OF SABLE 221 930 - -
Tpr3g4002 934 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 221 930 IPR045124 GO:0003723|GO:0045892
Tpr3g4002 934 ProSiteProfiles Zinc finger C3H1-type profile. 604 627 IPR000571 GO:0046872
Tpr3g4002 934 Pfam CCCH-type zinc finger 551 570 IPR041367 -
Tpr3g4002 934 MobiDBLite consensus disorder prediction 458 517 - -
Tpr3g4002 934 Gene3D - 542 602 - -
Tpr3g4002 934 MobiDBLite consensus disorder prediction 443 530 - -
Tpr3g4002 934 SUPERFAMILY CCCH zinc finger 603 632 IPR036855 GO:0046872
Tpr3g4002 934 SUPERFAMILY CCCH zinc finger 545 570 IPR036855 GO:0046872
Tpr3g4002 934 SMART c3hfinal6 574 600 IPR000571 GO:0046872
Tpr3g4002 934 SMART c3hfinal6 602 626 IPR000571 GO:0046872
Tpr3g4002 934 SMART c3hfinal6 546 571 IPR000571 GO:0046872
Tpr3g4002 934 ProSiteProfiles Zinc finger C3H1-type profile. 545 572 IPR000571 GO:0046872
Tpr3g4002 934 ProSiteProfiles Zinc finger C3H1-type profile. 574 601 IPR000571 GO:0046872
Tpr3g4002 934 Coils Coil 511 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4002 Tpr-Chr3 44456091 44464417 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr3g4002 zf-CCCH_4 1.5e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4002 - - cam:101495956 1147.88