Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3974 ATGGCAGAGTTGGTTGTTGAGGCATTACTTTCTTCTTCCTTTCAAATGATTTTTGAGAGGTTGGCTTCGGTTGATATCAGAGACTACTTTGGTAGTAATAAACTTGATAAGCTGGTGAAAGAACTTGATATTAAACTCAATTCTATCAACCATGTCTTGGAAGAAGCAGAGATAAAACAGTATCAAAGCACACATGTGAAGAAGTGGCTTGATGAACTTAAACATGTTGTTTATGAAGCAGACCAAATTTTGGATGAGATTGATACTGATGCAATGGTGAATGAGATGAAAGCGGAATCTGAACCTGTTACCACTATTGTATTGAGCTTTTTTCCATCTTTAACTCCAAATCCATTTGAATCTAGGATCAATGAACTACTGGAGAATCTACAGTTACTCGCAGATCAAAAGAAAGATTTGGGATTGGAAGATGGTCCTTGTGCTAGTAAAGAAGGCTTAGTCAGCTGGAAACCAGCAACTAGATTGTCAACTACAGCTCTTGTGGATGAGTCAACCATATATGGCAGAGGTGTTCAGAAGGAAGAACTTATCAAATTTTTATTTGAAGGCAATGACAGGGGCAACCAAGTTCCAATAATCAGCATAGTTGGTTTAGGAGGGATGGGAAAAACCACTCTTGCTAAGCTTGTGTACAACGACAATACGATGAAGGGTCACTTTGAACTTAAAGCATGGGTCTATGTTTCAGAATCTTTTGATGATGTTGGATTCACCAAAGCAATTCTCACGTCATTTGAGTTTTCAGCAGATGGCGAAGACTTGAATCTACTTCAACAACAACTGCATGACAAACTAACAGGCAAGAAATACTTGCTTGTTTTAGACGATATCTGGAACGGGAATGCTGAATGTTGGGAGAAGTTACTACTTCCGTTTAACCATGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGACAAGGAGGTAGCGGAGGTCCTGAATTCAAAGTTATTTGATTTACAACAATTGGACAAAAGCTATTGTTGGAGTTTATTTGTGACACATGCATTTCAAGGTAGGAATGTCTGCGAATATCCAAAATTTGAATCAATTGGAAAGAAAATAGTGAACAAGTGTGGAGGGTTGCCTTTAGCTGTAAAAACACTGGGACAACTGTTGAGAAAAAATTTCTCTGAACATGAATGGACTAAGATATTGGAGACTGATATGTGGAGATTACCAGACGGGGTCAAAAACATTAACCCAGTGCTGAGATTGAGTTATCATAATCTCCCTTCCAACCATAAGCGTTGTTTTGCTTATTGTTCTATATTTCCCAGAGGGTATGGCTATTGCAAAGGTGGGCTAATCAGGTTTTGGATGGCAGAAGGTTTGTTGAAGTGTTGTGGCGCAGGAAAAAGTGAAGAAGAGTTTGGTAATGAAATTTTCGGTGATCTTGAGTCAATTTCATTTTTCCAAAAATCGTCTTCCTACTTTGTGATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAATTTGGTATGCAAATAGAGGGTTCTAGGGTGAAAGGTATCCCTGAAAGAACACGTCACATTTGGTTGTATCTTCAATTAAATTGTGGTGATAAATTACTAGAGTCAATTTGTGAGCGTAAGGGATTACGTAGTCTGATAGTAATATGTTGCACAGCTACGTCAGATACGTTGATAAGCAAAAATGTGCAACTTGATCTGTTTTCAAGACTAACATGTTTGTGGATGTTATCATTTAGTTATTGTCGTCTCTCAGAGCTAGTTGATGAGATAGGCAATTTAAAACTTTTGCGTTATCTAGACCTTTCTCACACAAAGATTAAAAGCTTACCTGATACCATTTGTATGTTGTATAATTTGCAAACACTCTTGTTGGAAGGGTGTGAAATGATGACTGATCTCCCATCAAATTTCTCCAAACTCATCAATTTATGTCATCTTGAACTCCCTTTTGATCATAGTGATCGCTCTTATATAAAAAAGATGCCAAAAAATATAGGAAAGTTGAACAAACTTCAGTCCTTGCCTTACTTAATTGTGGAAGAGCATAACGGATCTGTTCTTCAGGAGTTGGAGAAACTAAATCATCTTCATGGAAGACTTCATATTGAAGGATTGGCTAATGTCGTTGATCCTGCAGATGCTGCAATGGCCAATTTGAAAGATAAGAAGTATTTAGAAGAATTACATATGAATTTCTATGAGAGAAGAGAAGAAATGAATGACTCAATTGTTGAAAGAAATGTATCTGTCTTTGAGGCTCTTCAACCAAACAGCAACTTGAAAAGGCTCACCGTTGAATACTACAATGGCAACTCTTTTCCGAATTGGTTAAAGGGTTGTCATTTACCCAACTTAGTATCTCTTAAAGTTAAGAGTTGTAGATTATGTTCTCATTTGCCGGCACTTGGTCAACTTGCTTCTCTCAAGGAGCTTTACATTTCACATTGTGATGGAATAAAGATCATTGGCGAAGAGATTTATGACAATAATTCAACAAGTATTCCGTTCATGTCCCTTGAAGTTTTGAAATTTGAGAATATGGACAATTGGGAAGAATGGTTATGGCTTGAAGGGTTTCCTTTGCTTAAAGTGATTTCTATTTACAATTGCCCCGAATTGAAAAGGGTCCTGCCTCAACACCTTCCTTCTTTACAAAATTTGTACATAGCTGAATGCAACAAGTTGGAGGAATGTTTGTGTCTTGAGGGATCTCCTTTTCTTAAAAAGCTTTCTATTAGACATTGTTCCAAATTGAAAAGGGCATTGCCTCAACACCTTCCTTCTTTACAGAAATTGACGATTTATAATTGCGAAATGATGGAGGCATCGATTCCCAAGGGTGATAGTATCTTAGAGTTAGATCTACAGAAATGTGATCGGATTTTTGTAAATGGATTGTCGACTTGCTTGAAAAAGTTTGTCCTTTTACAAAATCGGTATACCGAGTTCACGGAGGAGCAAAATTTAGTAAAATGTACCATTCTTGAAGAGTTGGAGTTTGATTTCAGAGGCTTTGTAAAACGTCCCTCTTTAGATTTGTGTTGCTATAATTCTCTTCGTAAACTTTCAATAACAGGATGGCACTCCTCCTCCTTGCCTTTTTCACTACATCAGTTCATCAATCTTCATTTGCTAGCGTTGACCGATTTCCAACAGCTGGAATCGTTACCTTGGGGAGGTTTGGCCTCCCACTTGGCAGAGCTTGTAATACGCAATTGCCCTAAACTGATTGCTTTGAGAGAGGAGTGGGGTTTGTTCCAACTCAATCATTTGAGACGTTTTACAGTTGGTGATCATGAGTTTGAAAATGTGGAGTCCTTCCCAGAGGAGAATCTTCTGCCACCAACTCTTGTGTTTCTTACTTTGCATAATTGTTCAAAGCTAAGAATAATGAACTACAAGGGTTTTCTCCACCTCAATTCTCTTAAATCTCTAATTATTAGAAACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCAATTACTCATCTCCCTTGATAGTTTGTGGATTAACAATTGTCCATTAATAAAGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCACACAATTCGTCACATCCGTGGAGTGAGATTTTAA 3612 0.3787 MAELVVEALLSSSFQMIFERLASVDIRDYFGSNKLDKLVKELDIKLNSINHVLEEAEIKQYQSTHVKKWLDELKHVVYEADQILDEIDTDAMVNEMKAESEPVTTIVLSFFPSLTPNPFESRINELLENLQLLADQKKDLGLEDGPCASKEGLVSWKPATRLSTTALVDESTIYGRGVQKEELIKFLFEGNDRGNQVPIISIVGLGGMGKTTLAKLVYNDNTMKGHFELKAWVYVSESFDDVGFTKAILTSFEFSADGEDLNLLQQQLHDKLTGKKYLLVLDDIWNGNAECWEKLLLPFNHGSSGSKIIVTTRDKEVAEVLNSKLFDLQQLDKSYCWSLFVTHAFQGRNVCEYPKFESIGKKIVNKCGGLPLAVKTLGQLLRKNFSEHEWTKILETDMWRLPDGVKNINPVLRLSYHNLPSNHKRCFAYCSIFPRGYGYCKGGLIRFWMAEGLLKCCGAGKSEEEFGNEIFGDLESISFFQKSSSYFVMHDLVNDLAKSVSGEFGMQIEGSRVKGIPERTRHIWLYLQLNCGDKLLESICERKGLRSLIVICCTATSDTLISKNVQLDLFSRLTCLWMLSFSYCRLSELVDEIGNLKLLRYLDLSHTKIKSLPDTICMLYNLQTLLLEGCEMMTDLPSNFSKLINLCHLELPFDHSDRSYIKKMPKNIGKLNKLQSLPYLIVEEHNGSVLQELEKLNHLHGRLHIEGLANVVDPADAAMANLKDKKYLEELHMNFYERREEMNDSIVERNVSVFEALQPNSNLKRLTVEYYNGNSFPNWLKGCHLPNLVSLKVKSCRLCSHLPALGQLASLKELYISHCDGIKIIGEEIYDNNSTSIPFMSLEVLKFENMDNWEEWLWLEGFPLLKVISIYNCPELKRVLPQHLPSLQNLYIAECNKLEECLCLEGSPFLKKLSIRHCSKLKRALPQHLPSLQKLTIYNCEMMEASIPKGDSILELDLQKCDRIFVNGLSTCLKKFVLLQNRYTEFTEEQNLVKCTILEELEFDFRGFVKRPSLDLCCYNSLRKLSITGWHSSSLPFSLHQFINLHLLALTDFQQLESLPWGGLASHLAELVIRNCPKLIALREEWGLFQLNHLRRFTVGDHEFENVESFPEENLLPPTLVFLTLHNCSKLRIMNYKGFLHLNSLKSLIIRNCPSLESLPEEGQLLISLDSLWINNCPLIKEKYKKEGGERWHTIRHIRGVRF* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3974 1203 Gene3D Ribonuclease Inhibitor 955 1188 IPR032675 -
Tpr3g3974 1203 Gene3D - 14 116 - -
Tpr3g3974 1203 Pfam NB-ARC domain 179 417 IPR002182 GO:0043531
Tpr3g3974 1203 Pfam Rx N-terminal domain 10 93 IPR041118 -
Tpr3g3974 1203 SUPERFAMILY RNI-like 858 1179 - -
Tpr3g3974 1203 Gene3D - 416 500 IPR036388 -
Tpr3g3974 1203 Coils Coil 123 143 - -
Tpr3g3974 1203 SUPERFAMILY L domain-like 488 944 - -
Tpr3g3974 1203 Gene3D Ribonuclease Inhibitor 882 954 IPR032675 -
Tpr3g3974 1203 Gene3D Ribonuclease Inhibitor 684 881 IPR032675 -
Tpr3g3974 1203 Coils Coil 39 59 - -
Tpr3g3974 1203 ProSiteProfiles Leucine-rich repeat profile. 598 619 IPR001611 GO:0005515
Tpr3g3974 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 430 IPR027417 -
Tpr3g3974 1203 Gene3D - 157 326 IPR027417 -
Tpr3g3974 1203 Gene3D - 330 415 IPR042197 -
Tpr3g3974 1203 PANTHER OS05G0414200 PROTEIN 30 1161 - -
Tpr3g3974 1203 Gene3D Ribonuclease Inhibitor 511 655 IPR032675 -
Tpr3g3974 1203 PRINTS Disease resistance protein signature 199 214 - -
Tpr3g3974 1203 PRINTS Disease resistance protein signature 271 285 - -
Tpr3g3974 1203 PRINTS Disease resistance protein signature 367 381 - -
Tpr3g3974 1203 PRINTS Disease resistance protein signature 594 610 - -
Tpr3g3974 1203 PANTHER DISEASE RESISTANCE PROTEIN RP 30 1161 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3974 Tpr-Chr3 44211712 44219781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3974 173 500 WRKY Transcription Factor Family AT5G45050 24.179 9.49e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3974 - - mtr:MTR_3g022600 1598.56