Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3957 ATGGGCATCATGAGTGTGATCGTTGCACTCAAACATTTGGTACCCGATGAGGAAAGAAACGCTGTTCGTGATCATGCACTAGTTGTCCCTTTGACACTTTTTGTTGCTGTTCTTTGTCTTTGTTTGTTAATTGGTCACTTGCTTGAAGAAAATCGATGGGTTAACGAATCTATTGTTGCCATTTTTGTTGGGTGCATTGCTGGAGCGATAATTTTGTTAATCAGTAAGGGAAAAAGTTCTCACATCCTTACATTTGATGAAGAATTATTCTTCATATATCTTCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACGGTTCTTCCATAACTTTTTCACAATCATGTTGTTCGGTGTCATTGGTGTTTTTATTTCAGCATCTATTATTACATGCGGCAGCTGGTGGCTCTTCCCCAAGTTGAACTTCCTTGACCTCACCGTGCGAGATTATCTTGCTTTAGGAACAATATTCTCCTCAACGGACACAGTTTGTACGCTACAGGTTCTCTCTCAAGATGATACTCCTTTACTATACAGCCTAGTATTTGGGGAAGGAGTGGTAAATGATGCAACATCGGTCGTACTCTTCAATGCAGTGCAAAAGATTGATGTTTCGAAACTTGACAGCCGGACATTGCGTGTTGTTGGTGATTTCTTGTATCTATTCTCAACAAGTACTGCTCTTGGAGTTGTAGCTGGACTTATCACAGCATATATCTTAAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATCTCGATGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATTTGAGCTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATCAATGTCACATTATGCATGGCATAATGTGACTGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCGTTTATTGCGGAAACTTTCATATTTCTTTATGTCGGTATGGATGCCCTTGACATGTCAAAGTGGAGGATGACCAAATTAGGAATTGTAAATTTGATGGGAATTTACAGCGGCTTAATCTTTTTAATATTACTTGGAAGAGCTGCATTTGTTTTCCCCCTCTCCGCACTTGCCAATTATATGAATAGGCGTTCTGAAGAAACACCGAGTATCACATTCAAACACCAGATAATTATTTGGTGGGCGGGGCTAATGAGGGGAGCAGTTTCAATTGCTTTGGCTTTCAAACAGTTCACGTACTCGGGAGTTACTTCTGATCCAATTAATGCGACAATGATCACCAACACCATTATTGTTGTCCTTTTCACCACACTGGTGTTTGGTTGTCTAACAAAACCACTTATTCGATATCTACTTCCACACCATGCAACAAGGGCAACCACCAGCCATGAAGAAGAAACAACGGAACCTGTTGAGGACATGAATCTACCTTTGTTATCCTTTGAGGAATCGGCAGCAACTAACATTAGCCGCGCAAAGGAAAGTCTATCCATGTTAATAGAAAGTCCCGTGTACACCATACATTACTATTGGAGAAAGTTTGATGATGCCTACATGAGACCAATATTTGGAGGACCGCGTGCTAACAATTCAGACTGCTAG 1602 0.4026 MGIMSVIVALKHLVPDEERNAVRDHALVVPLTLFVAVLCLCLLIGHLLEENRWVNESIVAIFVGCIAGAIILLISKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKRFFHNFFTIMLFGVIGVFISASIITCGSWWLFPKLNFLDLTVRDYLALGTIFSSTDTVCTLQVLSQDDTPLLYSLVFGEGVVNDATSVVLFNAVQKIDVSKLDSRTLRVVGDFLYLFSTSTALGVVAGLITAYILKALSFGRHSSVREISMMMLMAYLSYMLAELFELSGILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDMSKWRMTKLGIVNLMGIYSGLIFLILLGRAAFVFPLSALANYMNRRSEETPSITFKHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPINATMITNTIIVVLFTTLVFGCLTKPLIRYLLPHHATRATTSHEEETTEPVEDMNLPLLSFEESAATNISRAKESLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPRANNSDC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3957 533 PANTHER SODIUM/HYDROGEN EXCHANGER 18 530 IPR018422 GO:0006812|GO:0015299|GO:0016021
Tpr3g3957 533 Pfam Sodium/hydrogen exchanger family 34 448 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr3g3957 533 PANTHER SODIUM/HYDROGEN EXCHANGER 18 530 - -
Tpr3g3957 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 31 470 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr3g3957 533 Gene3D - 150 202 - -
Tpr3g3957 533 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr3g3957 533 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr3g3957 533 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr3g3957 533 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3957 Tpr-Chr3 44056389 44061794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3957 24 533 Antiporters AT5G55470 72.374 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3957 - - gmx:100813332 843.188