Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3956 ATGGCAGAAATTGCAGTGTCTTTAGTTGTAGACCAACTACTTCCACTGTTAAGGGAAGAAGCCAAGTTGTTGAGAGGTGTTCACAAGGAATTTGCAGATATTAAAGATGAACTTGAAAGCATCCAAGCCTTCCTTAAGGATGCTGATAAAAGAGCTGTTTCAGCTGAAGGTGAAGGAGTTAAAACATGGGTGAAGCAAGTTAGAGAAGTAGCTTTTCGCATAGAAGATATCATTGATGATTATTTGATCCAAGTAGGACAGAAGCCTCGTAAACCTGGATGTGTAGCTTTAGTCTGTAAGATTAAAACTATGATCCCTCGTCGTCGAATAGTGTCTGAGATTCAAGATATTAAGTCATCTGTGCGTGAGATCAAGGAAAGAAGTGAAAGATATAGCTTTCAACGTTCTTTGGAAAGAGGATCGAGCAATGACAAATGGCACGACCCTCGAGTGGCTGCTCTTTACATTGAGGAAGGTGAAGTTGTTGGTTATGAAGTACAAAGAGAGAGGTTGATTGATTGGTTGATAAAGGGAAGAGATGAACGGACGGTAGTTTCTGTAGTAGGAATGGGAGGGCAAGGAAAAACCACTCTTGCTAAGAAAGTTTTTGACAGCAAGAATGTCATTGGACACTTTGATTGTCGTGTATGGATCACAGTGTCTCAATCATATAATGTTGAAGGGTTGTTGAGGGACATGTTGCTAAAGTTTTACAAACAAAAAGGAGAAGATCCTCCTAAGGATATTTTTCAAATGGATCGAGGTTCATTAACCGATGAAGTGAGAAACTACTTGCAGCAAAAGAGGTACGTTATCGTGTTTGATGATGTTTGGAGTGTACATTTTTGGGATGATATTGAATTTGCTATAATTGATAATAAAAATGGAAGTAAAATATTTATCACAACAAGGAACCTAGATGTTGTGGTGTCTTGTAAAAAATCTTCTTTCATTGAAGTGCTTGAGTTGCAACCATTAACTCAAGAACAGTCTTTGGAGTTGTTCAATAAGAAGGCATTTAGATTTGACTATAGTGGGTGTTGTCCAAAGGAGCTCGTTTCTATAGCTTATGAAATTGTTAGAAAATGTAAGGGTTTACCACTAGCAATTGTTACCATTGGTGGTATTTTGTCTGCTAAAGAGAAAAATGTGTTTGAGTGGCAGAGATTTAGTGAAAATCTAAGTTTTGAGCTAATGAAAGATACACATCTAATTGGGATAAAAGAAATTTTAGGCTTAAGTTACGATGATTTGCCTTACTCTCTCAAGTCATGCTTGTTGTATTTTGGAATATATCCAGAAGATTATGAAGTTAAATCAAAGAGAGTGATTCGACAGTGGATAGCGGAAGGATTTGTGAAGGAGGAAAGGGGGAAGACTTTGGAAGAAGTTGCAGAAGGATATTTAACAGAGTTGGTCCATAGAAGCTTGGTGCAAGTATCTTCAATAAGAATTGATGGAAAAGCTAAAGGTTGTCGTGTTCATGATCTAATACGTGATATGATCCTTGAAAAATTTGAGGAATTAAATTTTTGCAAGCATATTAGTGAAGATGGACAATCATCCTTAAGTGGAACAGTTCGGCGGCTATCAATAACAACCACTTCCGATGATTTCATTGAGTGTATTGAAAGCTCACATGTTCGGTCAATACTTGTTTTTACAAATAAAACATCAAATACGTTAGCGAAGAGAATTCCTGCAAAATGTAGGTGGTTGAAGGTTCTTGATTATGAATCTACTCCATTGTTTAACATTCCTGAGAAGTTTGGAAATTTGATCCACTTGAAGTATTTAAGTTTGGGGTATATAACAGCAGGTAAAATCCCAAACTCCATTGGCATGCTACAGAACCTAGAGACATTGGATCTAAAGGCTACTAGTGTTAGTGAGTTGCCAAAAGGTATTAACAAGCTTAGAAATTTAAGACATCTTATCGGCTCTGGACTGTCGTTGATTCAATTAAACAACGGTCTTGGAGAGATGACATCCCTACAAACGCTGTGTTATATTAATTTAGGTATGGATGGTGCTGCAGAGGTAATTAAAGAGTTAGGAAAGCTGAAGAAGATGCGTGAGTTGGGGTTGCTTAATGTTCGTAGAGAAGATTACAACGTTCTATCGTCCTCAATTAATGAAATGCAACACTTGGAGAAATTACATGTTAAACTAAGTTCTGCAACTAATGATGAATTCGTTGATTTGAATTTGATTTCACCACCAACTAAGCTTCGAAAGCTTACACTACGTGGGAGGCTTCAGAAGTTACCAGAGTGGATTTTAGAGCTTCAAAATCTTGTTGTGTTGAGGTTGAAGCTTTCATGTTTAACTAAGGATCCAATGCAATCTCTAAAAAGTTTGCAACACTTGCTGATTCTTTCTATAGGAGTTGGTGCTTATGGAGGCTCACATTTGTATTTTCAAGATGGATGGTTTCAGAAACTAAAGGAACTGGATATTGGATCTTCGGATGAATTGAGAGAAATTATTATCGACAAAGGAACATTGTCTTCTTTGAAAAAACTTCAGTTATACGGACTCCCGAAACTGAAGAATATACCGACCGGCATCCAACACTTGGAGAAGCTTGAAGTTCTCCATATCAGGAGTATGCAAGTTGAATACTTGCAGCACAAGTCTCCGGAGGATTGGAATTGGATCATGGAGCATGTTCCCCTTGTAGAAATTTCTACCTCTGATGGAAATATTGTTCCAAACTCAAGGAGATAA 2730 0.3744 MAEIAVSLVVDQLLPLLREEAKLLRGVHKEFADIKDELESIQAFLKDADKRAVSAEGEGVKTWVKQVREVAFRIEDIIDDYLIQVGQKPRKPGCVALVCKIKTMIPRRRIVSEIQDIKSSVREIKERSERYSFQRSLERGSSNDKWHDPRVAALYIEEGEVVGYEVQRERLIDWLIKGRDERTVVSVVGMGGQGKTTLAKKVFDSKNVIGHFDCRVWITVSQSYNVEGLLRDMLLKFYKQKGEDPPKDIFQMDRGSLTDEVRNYLQQKRYVIVFDDVWSVHFWDDIEFAIIDNKNGSKIFITTRNLDVVVSCKKSSFIEVLELQPLTQEQSLELFNKKAFRFDYSGCCPKELVSIAYEIVRKCKGLPLAIVTIGGILSAKEKNVFEWQRFSENLSFELMKDTHLIGIKEILGLSYDDLPYSLKSCLLYFGIYPEDYEVKSKRVIRQWIAEGFVKEERGKTLEEVAEGYLTELVHRSLVQVSSIRIDGKAKGCRVHDLIRDMILEKFEELNFCKHISEDGQSSLSGTVRRLSITTTSDDFIECIESSHVRSILVFTNKTSNTLAKRIPAKCRWLKVLDYESTPLFNIPEKFGNLIHLKYLSLGYITAGKIPNSIGMLQNLETLDLKATSVSELPKGINKLRNLRHLIGSGLSLIQLNNGLGEMTSLQTLCYINLGMDGAAEVIKELGKLKKMRELGLLNVRREDYNVLSSSINEMQHLEKLHVKLSSATNDEFVDLNLISPPTKLRKLTLRGRLQKLPEWILELQNLVVLRLKLSCLTKDPMQSLKSLQHLLILSIGVGAYGGSHLYFQDGWFQKLKELDIGSSDELREIIIDKGTLSSLKKLQLYGLPKLKNIPTGIQHLEKLEVLHIRSMQVEYLQHKSPEDWNWIMEHVPLVEISTSDGNIVPNSRR* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3956 909 Pfam NB-ARC domain 168 417 IPR002182 GO:0043531
Tpr3g3956 909 Pfam Rx N-terminal domain 5 92 IPR041118 -
Tpr3g3956 909 PANTHER DISEASE RESISTANCE PROTEIN RP 26 871 IPR044974 GO:0006952
Tpr3g3956 909 Gene3D - 4 125 - -
Tpr3g3956 909 CDD RX-CC_like 2 126 IPR038005 -
Tpr3g3956 909 PANTHER - 26 871 - -
Tpr3g3956 909 Gene3D - 421 505 IPR036388 -
Tpr3g3956 909 Gene3D Ribonuclease Inhibitor 534 890 IPR032675 -
Tpr3g3956 909 SUPERFAMILY L domain-like 493 875 - -
Tpr3g3956 909 Gene3D - 325 419 IPR042197 -
Tpr3g3956 909 Gene3D - 151 320 IPR027417 -
Tpr3g3956 909 PRINTS Disease resistance protein signature 184 199 - -
Tpr3g3956 909 PRINTS Disease resistance protein signature 264 278 - -
Tpr3g3956 909 PRINTS Disease resistance protein signature 363 377 - -
Tpr3g3956 909 PRINTS Disease resistance protein signature 614 630 - -
Tpr3g3956 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3956 Tpr-Chr3 44045734 44048885 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3956 184 875 WRKY Transcription Factor Family AT5G45050 22.027 7.44e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3956 K13457 - gmx:100819372 960.674