Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3946 ATGGCAGAAATAGCAGTGTCATTTGCTATTGACAAACTGCTTCCATTGTTAACAGAAGAATTCAATTTGCTCAAAGGTGTTCACAAGGAATTTGCAGACATTAAAGATGAACTCGAAAGCATCCAAGCCTTCCTTAAGGATGCTGATAGAAGAGCTTCAGCACCTAATGGAGACAACAATGGTGAAGGAGTCAAAACATGGGTCAAACAGATTAGGGAAGCAGCTTTTCGGATAGAAGACATCATTGATAACTATATGATGTATGCGGAACAACGCCACAATTTTTCTCACTTGTTCAAAACTTTGAAACAACGCCATAAAATAGCATCTGGGATTCGAGACATTAAGTCATTGGTGCGTGGGATCAAGGAAAGAAGCGAAAGATATTGTTTCCAACGTTCTTTGGATCAAGGATCAAGCCATTCTAGAGGAAGCCAGAATGCCAAACTGTACCCCCTTCGAGAGGCTGCTCTTTACATTGAAGAAGCTGACGTTGTGGGCTTTGAAACACCAAGAAGAATATTGATGGAATGGATGTTCGAGTTGAAAGGAAGAAAGGACCCCACTGTCTTCTCTGTGGTAGGAATGGGAGGGCAGGGCAAAACCACTCTAGTCAAGAAAGTTTTTGACAACAACAAAGTCATTGCACACTTTCATTATCGTGTATGGATCACTGTGTCTCAAACATATGATGTTAAAGAGGTGTTGAGGGACATGTTGCTAAAAATTTGCAAACAAAATCCACCTCAAAATATTAATCAAATGGATCAAAGGTCATTGACTGAAGAACTGAGAAAGTACTTGAGGCGAAAGAGGTATGTTGTGGTGTTTGATGATGTTTGGAATGTAAAGTTTTGGGATGATATTAAAAATGCTGTAATTGATAATAAAAGTGGAAGTAAGATATTGATAACAACAAGGAACGAAGACGTTTTGAAGTCTTGTAAAATATCTTCTTCCACTGAAGTGCTTAATTTGCAACCTTTAACTCGAGAACAGTCTTTGAAATTGTTCAATAAGAGGGCATTCAAATTTGACTCTGGTGGATGTTGTCGAGAAGATCTCATTGGTATAGCTAATGAAATTGTTCAAAAATGTAAGGGCTTGCCACTAGCAATTGTTGCCATTGGTGGTCTTTTGTCTACAAAAGAGAAGCATGTGTTTGAGTGGCAGAGATTTAGTGAAAATTTAAGTGCGGAGCTAAAGAAAGATACACATTTAATTGAGATAAAAGATATTTTAGGCTTAAGTTACGATGATTTGCCTTATTATCTCAAGTCATGCTTGTTGTATTTTGGAATGTATCCAGAAGATTATGAAGTTGAACCAAATAGAGTGATTCAACAATGGATTGCTGAAGGGTTTGTGAAAGAGGAGCAGGGGAAGACTTTGGAAGAAGTTGCAGAAGGATATTTAACAGAGTTGATCCATAGAAGCTTGGTGCAAGTATCTTCAATTGGAATTGATGGTAAAGCTGAAAGTTGTCGTGTTCATGATCAAATACGCGAGATGATCCTTGAAAAGTTTGAGGATTTAAACTTTTGTAAGGAAATTAGTGAAAATGATAATGAATCACCACCACTTTTTGAGAATAGAATTCCTAAAAATTACAAGCTGTTGAGGGTTCTTGATTGTCAATCTACTTCAATGTTGAACGTTCCGGAAAATTTGGGAAGTTTTGTCCACTTGAAGTATTTAAGCTTGGGGTCTGTTGAGATATTGGAAATCTTAAAATTTATTGGCATGCTCCGTAACCTAGAGACCTTGAATATACGGAGTCAAATAGTTGTTGAGTTGCCCAAAAAGATTAGGAAACTTGGAAAACTAAGACATCTTACTTGCTGGTATCTGTCTTTGATTCAATTAGAGGATGGTATTGGAGAGATGAGATCCCTACAAACGCTACGTAGTGTTAATTTAGATATGGAAGGAGCGGCAAAGATAATTAAAGGGTTTGGAGAGCTGAAGCAGATGAGGGATTTGGGGTTGATTAATGTTCGTAGAGAACATGGAACCATTCTATCTTCGTCAATCAATGAAATGCAACACTTGGAAAGACTAGTTGTTGTATCAAGACATGAAGAGCGCTCTTATGAAGTCATTGATTTGAATTTGATTTCATTGCCAACTAAGCTTCAAAAACTTACACTAGAGGGGATTCTACACAAGTTACCCGAATGGATTCCAAAGCTTCAAAATCTTGTTGAGTTGACGTTGCGCAAGTCCCGTTTAACTCAAGATCCATTGAAATCACTAAATTGTTTGCAACAATTGTTGTCCTTCAATATAGGCAATGATTCTTATGAAGGTTCATGTTTGCATTTTGAAGATGGATGGTTTCAAAAACTAAAGAAACTGAATGTTAGTTGTATTTCTGAATTGAGAGAAGTTATTATTGACAAAGGAGCACTGCCTTCTCTGAAATAG 2427 0.3721 MAEIAVSFAIDKLLPLLTEEFNLLKGVHKEFADIKDELESIQAFLKDADRRASAPNGDNNGEGVKTWVKQIREAAFRIEDIIDNYMMYAEQRHNFSHLFKTLKQRHKIASGIRDIKSLVRGIKERSERYCFQRSLDQGSSHSRGSQNAKLYPLREAALYIEEADVVGFETPRRILMEWMFELKGRKDPTVFSVVGMGGQGKTTLVKKVFDNNKVIAHFHYRVWITVSQTYDVKEVLRDMLLKICKQNPPQNINQMDQRSLTEELRKYLRRKRYVVVFDDVWNVKFWDDIKNAVIDNKSGSKILITTRNEDVLKSCKISSSTEVLNLQPLTREQSLKLFNKRAFKFDSGGCCREDLIGIANEIVQKCKGLPLAIVAIGGLLSTKEKHVFEWQRFSENLSAELKKDTHLIEIKDILGLSYDDLPYYLKSCLLYFGMYPEDYEVEPNRVIQQWIAEGFVKEEQGKTLEEVAEGYLTELIHRSLVQVSSIGIDGKAESCRVHDQIREMILEKFEDLNFCKEISENDNESPPLFENRIPKNYKLLRVLDCQSTSMLNVPENLGSFVHLKYLSLGSVEILEILKFIGMLRNLETLNIRSQIVVELPKKIRKLGKLRHLTCWYLSLIQLEDGIGEMRSLQTLRSVNLDMEGAAKIIKGFGELKQMRDLGLINVRREHGTILSSSINEMQHLERLVVVSRHEERSYEVIDLNLISLPTKLQKLTLEGILHKLPEWIPKLQNLVELTLRKSRLTQDPLKSLNCLQQLLSFNIGNDSYEGSCLHFEDGWFQKLKKLNVSCISELREVIIDKGALPSLK* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3946 808 Gene3D Ribonuclease Inhibitor 506 664 IPR032675 -
Tpr3g3946 808 CDD RX-CC_like 2 124 IPR038005 -
Tpr3g3946 808 Pfam Rx N-terminal domain 5 100 IPR041118 -
Tpr3g3946 808 SUPERFAMILY L domain-like 498 796 - -
Tpr3g3946 808 Gene3D - 158 321 IPR027417 -
Tpr3g3946 808 Pfam NB-ARC domain 177 420 IPR002182 GO:0043531
Tpr3g3946 808 PANTHER DISEASE RESISTANCE PROTEIN RP 30 798 IPR044974 GO:0006952
Tpr3g3946 808 Gene3D Ribonuclease Inhibitor 665 808 IPR032675 -
Tpr3g3946 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 432 IPR027417 -
Tpr3g3946 808 PRINTS Disease resistance protein signature 190 205 - -
Tpr3g3946 808 PRINTS Disease resistance protein signature 267 281 - -
Tpr3g3946 808 PRINTS Disease resistance protein signature 366 380 - -
Tpr3g3946 808 PRINTS Disease resistance protein signature 535 551 - -
Tpr3g3946 808 Gene3D - 424 505 IPR036388 -
Tpr3g3946 808 Gene3D - 4 109 - -
Tpr3g3946 808 PANTHER - 30 798 - -
Tpr3g3946 808 Gene3D - 328 422 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3946 Tpr-Chr3 43969006 43972564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3946 195 385 WRKY Transcription Factor Family AT5G45050 27.461 4.41e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3946 K13457 - gmx:100819372 802.357