Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3944 ATGGCAGAAATAGCAGTGTCTTTTGCTATTGACAAACTGCTTCCATTGTTATCAGTACAAGTCAATCTGCTCACAGGTGTTCACAAGGAATTTGCAGAAATTAAAGAAGAACTGGAGAGCATCCAAGCCTTCCTTAAGGATGCTGATAAAAGAGCTGCAGCTCAAGCACCCAATATCAGTGAAATGGAGAAAATATGGGTGAAGCAAGTTAGAGAAGTAGCTTTTCGCATAGAAGACATAGTCGATGAATATTTGCTTTCTTTAGAGCACCAACCTCAAGATCCCGGATGTGCAGCTTTACTCCAGATGATCACTCACCCGTTCAAAACTTTGAAACAACACCATCAAATAGCGTCTGAGATTCAGGACATTAAGTCATTGATGTGTGGGATCAAGGAAAGAAGTAAAAGTTATGATTTCAAACTTTCTTTTGAACAAGGTTCAAGCAGTTCTAATGGAATCCAGAAATCCAAACTGCACCCCCTTCGAGAGGCTGCTCTTTACATTGACGAAGCTGACGTTGTGGGCTTTGAAGCGCCAAAAAAAGTATTGATTGATTGGATGGTAAAGGGAAGAAAAGAGCGTACTGTCATCTCTGTGGTAGGAATGGCAGGACAAGGCAAAACCACTCTAGTCAAGAAAGTTCTTGACAACAAAGATGTCATTGCACACTTTGATTGTCTTGTATGGATTACAGTGTCTCAAACATACAATGTTAAAGACTTGTTGAGGGACATGTTGCTAAAAATTTACAAACAAAATGAAGAAAATCCACCTCAGAATATTAATCAAATGGATCAAAGGTCGTTGACCGATGTGGTGAGAAACTACTTGCAGCAAAAGAGGTATGTTGTTGTGCTTGATGATGTTTGGAGTGTACAATTTTGGGATGATATTGAACAAGCTGTAATTGATAATGAAAGTGGAAGTAGGATATTGATAACAACAAGGAACCTAAATGTTGTGGTGTCTTGTAAAAAATCTTCTTTCACTGAGTTGCTTGAGTTGCAACCTTTAACTCAAGAACAATCACTGGAGTTGTTCAACAAGAAGGCATTCAAATTTGACTATGGTGGATGTTGTCCAAAAGACCTCAGTTGTATAGCTGTTGAAATTGTTAATAAATGCAAGGGTTTACCACTTGCACTTGTTGCCATTGGTGGTCTTTTGTCTACAAGAGCGAAAACTGGGTTTGAGTTGCAGAGATTTAGAGAAAATTTCAGTTTAGAGCTAAAGAAAGATACAAATCTAATTGGGATAAAAGAAATTGTAGCTTTAAGTTATGATGATTTGCCTTACTATCTCAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTATCAAGTTAAACCAAATAGAGTGATTCGACACTGGATAGCTGAAGGGTTTGTGAAAGAAGAAAGGGGGAAGACTTTGGAAGAAGTTGCAGACGGATATTTAACAGAGTTGATCCATAGAAGCTTGGTGCAAGTGTCTTCAATTAGAAAAGATGGTAAAGCTAAAGGTTGTTGTGTTCATGATCAAATACGTGAGATGATCCTTGAAAAGTTTGAGGATTTGAACTTTTGCAGGCAAACTAGTGAAGACGGTAAGTCATCCTTAAGTGGAATAATTCGGCGCTTGTCAATAACAACCACGTCCAATGATTTAACGCCGTGTATTGAAAGCTCGCATGTTCGGTCATTGCTTGTTTTTACAAATATAGAATCAAAATTATTTTCTGGGAATAGAATCCCTAAAAATTACAGGCTGTTGAGGGTTCTTGATTGCAAATCTGCTTTAGTTCCTGAGAATTTGGGAAGTTTTATCCACTTGAAATATTTAAGCTTGAGGTTTATTGGGGAATGTAAAATCCTAAAATATATTGGAAAGCTCCATAGCCTAGAGACCTTGGATCTAAAGGCTACTGGTGTTGGTGATTTGCCCAAAGAGATTAGCAAGCTTATAAAGCTAAGACATCTTATCGGCTCTAGACTGTCTTTGATTCAATTAGAGGATGGTATTGGTGAGCTGACATCCCTTCAAACGCTGCGCTATGTTAATTTAGATTCGGATGGAGCGGAAAAGATAATTAAAGGGTTAGGAAAGCTGAATCAGATGAGGGATTTGAGATTGATTACTGTTCGTAGAGAACATGGAACCATTCTATCTTCGTCGATCAATGAAATGCAACACTTGGAAATACTAGTTGTTGGATCAAGATGTGGTGACGAGGGTTATGAAATCATTGATTTGGATTTGATCTCATTGCCAACTAAGCTTCGAAAACTTAGACTAATTGGGATTCTACAGAAGTTTCCCGAATGGATTCCAAAGCTTCAAAATCTGGTTGAGTTGAGGTTGTGGAACTCCAATTTACCTGAAGATCCATTCAAATCAGTAATTTGTTTGCAAAACTTATTGTCCCTCAATATACGGCATTGTGCTTATAAAGATTTGTGTTTGCATTTTGAAGTTGGATGGTTTCAAAAACTTAAAAAACTGAATGTTGGATATACCAAAGAATTGAGAGAAGTTATCATTGACAAAGGAGCACTGCTTTCTCTGAAAAAGCTAAAGTTTGACAGGCTCCTCGGACTGGAGAATATACCCACTGGCATCCAACACTTGGAGAAGCTTGAAGTTCTCCGTATTTCTTATATATCAGATGAATTGGTGCAGAACATTTCTACTGAGGATTGGAATTCAATGCAGCATGTGCCCCTTGTACAAATTTCTGGCAGTGATGGAATTCTTATTCCACATCCAAGGAGTTAG 2763 0.3789 MAEIAVSFAIDKLLPLLSVQVNLLTGVHKEFAEIKEELESIQAFLKDADKRAAAQAPNISEMEKIWVKQVREVAFRIEDIVDEYLLSLEHQPQDPGCAALLQMITHPFKTLKQHHQIASEIQDIKSLMCGIKERSKSYDFKLSFEQGSSSSNGIQKSKLHPLREAALYIDEADVVGFEAPKKVLIDWMVKGRKERTVISVVGMAGQGKTTLVKKVLDNKDVIAHFDCLVWITVSQTYNVKDLLRDMLLKIYKQNEENPPQNINQMDQRSLTDVVRNYLQQKRYVVVLDDVWSVQFWDDIEQAVIDNESGSRILITTRNLNVVVSCKKSSFTELLELQPLTQEQSLELFNKKAFKFDYGGCCPKDLSCIAVEIVNKCKGLPLALVAIGGLLSTRAKTGFELQRFRENFSLELKKDTNLIGIKEIVALSYDDLPYYLKSCLLYFGMYPEDYQVKPNRVIRHWIAEGFVKEERGKTLEEVADGYLTELIHRSLVQVSSIRKDGKAKGCCVHDQIREMILEKFEDLNFCRQTSEDGKSSLSGIIRRLSITTTSNDLTPCIESSHVRSLLVFTNIESKLFSGNRIPKNYRLLRVLDCKSALVPENLGSFIHLKYLSLRFIGECKILKYIGKLHSLETLDLKATGVGDLPKEISKLIKLRHLIGSRLSLIQLEDGIGELTSLQTLRYVNLDSDGAEKIIKGLGKLNQMRDLRLITVRREHGTILSSSINEMQHLEILVVGSRCGDEGYEIIDLDLISLPTKLRKLRLIGILQKFPEWIPKLQNLVELRLWNSNLPEDPFKSVICLQNLLSLNIRHCAYKDLCLHFEVGWFQKLKKLNVGYTKELREVIIDKGALLSLKKLKFDRLLGLENIPTGIQHLEKLEVLRISYISDELVQNISTEDWNSMQHVPLVQISGSDGILIPHPRS* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3944 920 PANTHER DISEASE RESISTANCE PROTEIN RP 30 880 IPR044974 GO:0006952
Tpr3g3944 920 Gene3D - 166 331 IPR027417 -
Tpr3g3944 920 Gene3D Ribonuclease Inhibitor 555 910 IPR032675 -
Tpr3g3944 920 Gene3D - 434 518 IPR036388 -
Tpr3g3944 920 Pfam Rx N-terminal domain 5 93 IPR041118 -
Tpr3g3944 920 CDD RX-CC_like 2 126 IPR038005 -
Tpr3g3944 920 Pfam NB-ARC domain 181 429 IPR002182 GO:0043531
Tpr3g3944 920 PANTHER - 30 880 - -
Tpr3g3944 920 PRINTS Disease resistance protein signature 197 212 - -
Tpr3g3944 920 PRINTS Disease resistance protein signature 277 291 - -
Tpr3g3944 920 PRINTS Disease resistance protein signature 376 390 - -
Tpr3g3944 920 PRINTS Disease resistance protein signature 625 641 - -
Tpr3g3944 920 Gene3D - 338 432 IPR042197 -
Tpr3g3944 920 SUPERFAMILY L domain-like 507 883 - -
Tpr3g3944 920 Gene3D - 4 118 - -
Tpr3g3944 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 442 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3944 Tpr-Chr3 43946322 43949569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3944 198 383 WRKY Transcription Factor Family AT4G12020 29.688 1.96e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3944 K13457 - gmx:100819372 916.761