Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3933 ATGATGCCAAGTGTTAAACCAAATCCATCGGACAAAGACTCAGAGCCATTCGTCGAAACCGATTCAACCGGACGATATGGCCGATACAACGAACTCCTAGGATCAGGTGCCTGCAAGAAAGTATACAGGGCATTTGATCAAGAAGAAGGAATAGAAGTAGCTTGGAACCAAGTTAAGCTCAGACACTTCAGCAATGATCCTGCAATGATTGATAGACTTTACTCTGAAGTGAGGTTGCTTAGAAGCATGAAAAACAAAAACATCATTGCTCTTTATAATTTTTGGAGAGATCAAGATCATAATACATTGAATTTCATCACTGAGGTTTGTACAAGTGGGAATTTGAGAGAGTATAGGAAGAAACATAAACATGTTTCTGTTAAAGCTTTGAAGAAGTGGTCTAAGCAAATTTTGGAAGGGTTGAATTATTTGCATCTTCATGATCCTTGTATCATTCATAGAGATCTCAATTGCAGTAATGTTTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTAGGTTTGGCGGCAATTGTTGGAAAGAACCATTCAGCACATTCAGTTCTAGGGACACCGGAATTTATGGCACCAGAATTATATGAAGAAAATTACACTGAAATGGTGGACATATACTCATTTGGAATGCTAGTATTAGAGATGGTGACACTAGAGATTCCTTATAGTGAATGTGACAATGTTGCAAAAATATACAAAAAGGTATCTTCAGGTCTGAGGCCTCAATCCTTGAACAAAGTTAAAGATGCTGAAGTGAAGGCTTTCATTGAAAAATGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTCAAGAATTGCTAAAGGATCCTTTCTTTGGTGTTTTAGATGATGATGAAAATGATGATGACAATTACTCGGTTAATTTGTAA 909 0.3751 MMPSVKPNPSDKDSEPFVETDSTGRYGRYNELLGSGACKKVYRAFDQEEGIEVAWNQVKLRHFSNDPAMIDRLYSEVRLLRSMKNKNIIALYNFWRDQDHNTLNFITEVCTSGNLREYRKKHKHVSVKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSVLGTPEFMAPELYEENYTEMVDIYSFGMLVLEMVTLEIPYSECDNVAKIYKKVSSGLRPQSLNKVKDAEVKAFIEKCLAQPRARPSAQELLKDPFFGVLDDDENDDDNYSVNL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3933 302 Gene3D Transferase(Phosphotransferase) domain 1 110 288 - -
Tpr3g3933 302 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3933 302 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g3933 302 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3933 302 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Tpr3g3933 302 SUPERFAMILY Protein kinase-like (PK-like) 23 285 IPR011009 -
Tpr3g3933 302 CDD STKc_WNK 25 285 - -
Tpr3g3933 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 297 - -
Tpr3g3933 302 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3933 Tpr-Chr3 43857642 43859859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3933 11 288 MAP Kinase Kinase Kinase AT5G55560 82.796 7.12e-179 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr3g3933 Pkinase 6.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3933 K08867 - gmx:100818126 536.954