Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3930 ATGGACGCCGGCGAACCTCAATTCCGGCGACAAGCTTCCGGCGAGATGGAACATGATCATGAAGATCCAAATCGAACTGGGTCACGACCCGATTCTGCTTCAGATGGAGCTACCACCTCAGCTAACACCTCCGGAGCTAGATACAAGCTGATGTCTCCGGCGAAGCTCCCGATCTCTAGGTCACCGGTTTTAACAATTCCGCCGGGACTCAGTCCGACTTCATTTCTTGAATCCCCCGTTCTTCTCTCAAATATGAAGGTAGAACCTTCACCCACAACAGGTTCCCTTCCTAGGCTTCAACAAATAGGACATGGTTTTATAACTTCTTCTGCGTCTGCTACACTTCCTGTAACCAGTGGACGCTTCAATAGTAATACTGTTGATGACGGAAAATACAGCTTCTTTGAGTTCAAACCGCACGGTAGATCAAATATGGTTCCTGTTGACTTTCACAACCATGCATGTGAAAAACCTGCTCAAATAGATGGTCAAGGAAAAGTTCAATCTTTTGTTTCACCATTAGTCAAAAGAGAAATAACTGCCCCTTCAGATGAAATAAGTCTATCATCATCACCTGTTCAAATGGTTAGTTCAGGGGCTAGTGCTCATGCTGAAGCCAATTTGGACGAATTAAATCCCAGTGGCAACATACCAACTGGGCTTCAAGCATCACAAGTTGATGGTAGGGGCAGTGGACAAGTTGCTGCCGACAAGGCATCCGATGATGGATACAATTGGCGAAAATATGGGCAGAAGCTTGTTAAAGGATGTGAATTTCCACGCAGTTATTACAAATGCACACATCCTAACTGTGAAGTGAAGAAACTCTTTGAACGCTCTCATGATGGCCAAATTACCGAAATAGTTTACAAAGGAACACATGATCATCCTAAACCTCAACCAAGCCGTCGATACTCTGGTGGAAATGTTATGTCTGTGCAAGAAGATAGATCTGATAGGGCTTCTTTGACTAGCCGAGACGCTGAGCGTGACAGTACTCCAGAGCTATCGCCTATAGCAACAAATGCTGATAGTCCAGAGGGTGCAGGGTTTTTGTCTAACCGGAGTAATGATGAGGTTGATGAAGACGATCCTTTCTCAAAGCGAAGAAAAATGGATCTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGTGTCGTTGTACAAACTCTGAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAATATGGGCAGAAGGTGGTAAGAGGGAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCGGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACCACATACGAGGGTAAACACAATCATGATGTACCAACTGCAAGGAATAATAGTCATGATATGGCAGGACCATCAGCTGCAGGTGGACATACAAGAATCCGGCGAGAAGAAAGTGATACTATTAGCCTTGACCTTGGAATGGGCCTTAGCCCAAGAACTGCTGAAAATAGATCAAACAATCAAGGGAGAATGATGCTTACTGAATATGGGGAGAACCAAACTCACAATCACAACAGCAATTCCAGTTTCAAGTTTGTTCATAATACTCCGCCTCCAGTATACTTTGGTGTACTAAATAACAACTCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAATTCATCTTTAAACCATTCGGCTTATCCTTGCCCACCGAACATGGGAAGAATACTTATGGGTCCGTAA 1749 0.442 MDAGEPQFRRQASGEMEHDHEDPNRTGSRPDSASDGATTSANTSGARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQIGHGFITSSASATLPVTSGRFNSNTVDDGKYSFFEFKPHGRSNMVPVDFHNHACEKPAQIDGQGKVQSFVSPLVKREITAPSDEISLSSSPVQMVSSGASAHAEANLDELNPSGNIPTGLQASQVDGRGSGQVAADKASDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRYSGGNVMSVQEDRSDRASLTSRDAERDSTPELSPIATNADSPEGAGFLSNRSNDEVDEDDPFSKRRKMDLDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNNSHDMAGPSAAGGHTRIRREESDTISLDLGMGLSPRTAENRSNNQGRMMLTEYGENQTHNHNSNSSFKFVHNTPPPVYFGVLNNNSNPYGSRENPSDNSSLNHSAYPCPPNMGRILMGP* 583
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3930 582 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 MobiDBLite consensus disorder prediction 1 48 - -
Tpr3g3930 582 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 33 562 - -
Tpr3g3930 582 MobiDBLite consensus disorder prediction 319 333 - -
Tpr3g3930 582 ProSiteProfiles WRKY domain profile. 235 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 MobiDBLite consensus disorder prediction 29 47 - -
Tpr3g3930 582 Gene3D WRKY domain 384 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 Gene3D WRKY domain 231 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 33 562 IPR044810 GO:0003700
Tpr3g3930 582 MobiDBLite consensus disorder prediction 290 367 - -
Tpr3g3930 582 MobiDBLite consensus disorder prediction 464 483 - -
Tpr3g3930 582 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3930 582 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr3g3930 Tpr-Chr3 43827388 43834285 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3930 51 582 WRKY Transcription Factor Family AT4G26640 54.775 0.0 522
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3930 WRKY 1.4e-25 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3930 - - gmx:100781491 872.078