Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3924 ATGGAAGATTGTGAAAGTAGTGAAATTGGGAACCCTAATTGGGAAATTGCATTAAGAAAGTGTGAGAATGTTTTAGCATTAGGAACCAAATCTATGAAAATTAAAGCTATGGTTAATCTAGCTAAATACTCTAAACAAGCCCCTGAACATGTATTATCTAGCTTCATACCAATTCTCAATGAGATTCTTGGTTATAAGGACATTGGAAGGGATTCGGTTCCGGATTCACTTCAAGAGGCTGCTGCTTATTGCTTGAAGTGCATTGCTTGTAGAGGTGATGGTAGTTTGGCTATTGAAATGGGTCGACATGGTGTTCCACTTACTATGATAAGGTTGTTGCTTTGTTCCGAGGGAATGATGCAGAAATCTCTGACAAAATGTTTAATGGTTGTTGTTAGTTTTTGTAGTACAAGTAGGGCAGTTGTTGGAGCTAATGAGGGTTTATTAATTATAATCACTTTGTTGATTACTGGTGGCAATGATGTTAGATTGTATTTGTTAGAGATTTTGAGTGCATTGACGCTTCTGAGGGAAGTTAGGAAGGAACTTACTAGAATAGGAGCTCTTGGTTTTCTTGTGGAAGCTGCTAGTGTTGGCAGCATGATTTCCAGGGAAAGGGCATGTCAATCAATTGGATTGATTGGAGTTACGAAACAAACTAGGCGTACACTTGTTGAATTGGGAGTCATACCCGTGCTTGTGGAGTTGTTTCGCATAGGAGATAAAACTATGAAACTTGTTGCCGGTAATAGTCTTGGTGTGGTAGCTCGTCTTGATTACATTAAACTAGTTGCTCAAGCCGGGGCTATACCTCTTTATGCCGAGCTTCTTAAAGGACCCGATGTTTCTGGTAAGGAGATAGCTAAGAATATGTTTTGTATATTGGCTCTTGAAGAGGCGAATGCGGTTGAAATTGTTGGTCACTTGGTTAGAATTCTTAGAGAAGATGATGATGAAGCTAAAACAACAGCTGCTGATGTGATTTGGGATCTGTCTGCAAACAGCAACACAATTTCTGTGATTCATGATTCAGGTGTCACTATCCTTGTCGAGCTTCTGCTCCATGGGAGTGAGGAAGCAAAGCTAAATGTTTCTGGGGTATTTTCTCAGCTGAGCTATAGTGAAAGCGGTAGAATGGCCCTTGCTGATGCTGGTGCAATTCCAATTCTCATTGACTTGCTACATGATGAGACTGAGGAACTAAGTGATAATGTTGTCGAGTTTCTTTCTAATTTTCATGAAGATCCATTACACCGTGATGGATTATCTGATCTTGTTAATAGTCCTTCGTTTAGAAATATGCAGAATAGACTATTTAGTAATCGTACAACGGATGGGTATATGCCTGGGCATCTGCCTAGAGCTTTACGTTCAATGAGTGTTGAGGAATTCATCTTGAACCGGGATCAGGTTTAA 1416 0.3983 MEDCESSEIGNPNWEIALRKCENVLALGTKSMKIKAMVNLAKYSKQAPEHVLSSFIPILNEILGYKDIGRDSVPDSLQEAAAYCLKCIACRGDGSLAIEMGRHGVPLTMIRLLLCSEGMMQKSLTKCLMVVVSFCSTSRAVVGANEGLLIIITLLITGGNDVRLYLLEILSALTLLREVRKELTRIGALGFLVEAASVGSMISRERACQSIGLIGVTKQTRRTLVELGVIPVLVELFRIGDKTMKLVAGNSLGVVARLDYIKLVAQAGAIPLYAELLKGPDVSGKEIAKNMFCILALEEANAVEIVGHLVRILREDDDEAKTTAADVIWDLSANSNTISVIHDSGVTILVELLLHGSEEAKLNVSGVFSQLSYSESGRMALADAGAIPILIDLLHDETEELSDNVVEFLSNFHEDPLHRDGLSDLVNSPSFRNMQNRLFSNRTTDGYMPGHLPRALRSMSVEEFILNRDQV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3924 471 SUPERFAMILY ARM repeat 75 414 IPR016024 -
Tpr3g3924 471 SMART arm_5 374 414 IPR000225 GO:0005515
Tpr3g3924 471 SMART arm_5 217 257 IPR000225 GO:0005515
Tpr3g3924 471 SMART arm_5 334 373 IPR000225 GO:0005515
Tpr3g3924 471 SMART arm_5 290 333 IPR000225 GO:0005515
Tpr3g3924 471 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 6 466 - -
Tpr3g3924 471 Gene3D - 26 255 IPR011989 -
Tpr3g3924 471 Gene3D - 256 431 IPR011989 -
Tpr3g3924 471 PANTHER U BOX DOMAIN-CONTAINING 6 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3924 Tpr-Chr3 43743767 43745805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3924 309 432 U-box Gene Family AT2G23140 29.600 2.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3924 - - cam:101502901 573.933