Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3923 ATGGCCGAAATGGCCGTGTCTTTTGTTCTTGAGCAACTGATTCCACTGTTAACAGAAGAAGCCAAGCTGTTGGGAGGTATTCACAAAGAATTTGCAGACATTAAAGATGAATTTGAATGCATTCAAGCCTTCCTTAAGGATGCTGATAAAAAAGCTAAAAGAGACGACACTACTGAAGGAGTCAAAACTTGGGTGAAGCAAGTTAGGGAAGCAGCTTTTCATATTGAAGATGTCATTGATGATTATCTGATCCAAGTGAGACAGGAGCCTCGTGATCCTGGATTTGTAGCTTTACTCCATAAGATTGTTCACTCACTCAAAGTTATTATCCCTCGTCATCAAATAGCGTCGAAGATTCAAGGCATTAAGTCATCTCTTCGTGGGATCAAGAAGAGAAGCCAAACCTATGGCTTTCAACGTTCTTTGGAACAAGGATCGAGAAGCTTTAGAGGAAGAAAAAGTGCGAAATGGCACGACCCTCGAATGGATGCTTTGTACATTGATGAAGCTGAAATGGTAGGCTTTGAAGAACCCAAAAATAAATTGATTGAATGGTTGCTAGAGGGAAGATCTGAGCGCACTGTCATCGCTGTGGTAGGTATGGGAGGACAAGGAAAAACCACTCTTGCAAAAAAAGTTTTTGACAACAAAAAGGTAGTGGGAGACTTTGACTATCGTGTATGGATCACAGTGTCACAATCATACTATATAGAAGGGTTGCTGAGAAGCATGTTGAATGAGCTTTACAAACAAGAAGGGGACACTCCTCCTCAAGATATCTCTCAAATGGATCGAGAGTCGTTGATTTCTATGCTAAGAAACTACTTGCAACAAAAGAGGTATGTTTTTGTGTTTGATGATGTGTGGAACATACATTTTTGGAATGAGATTCAAAATGCATGTATTGATAATAAAATGGGGAGCAAGATATTTATTACAACGAGAAATATGGAAGTTGCCACAAATTGTCGTAAATCATCTGTTGTTAAAGTGCATGATATGCAACCTTTATCGGAAGTTCAATCATTTGAGTTGTTCAAAAAGAAGGCATTCCAAAAAAAAGACATTCCAAATGAGCTCAAAGAGATATCTTTAAAAATTGCAAACAAATGCAAAGGTTTACCGCTGGCAATTGTTGCCATTGGCGGTCTATTGTCTACAAAAGAGAAAAGCTTACTTGAGTGGCAGAAATTTTGTGATAAATTGCCTTTAGAGCTAAAGAGGGATTCCCATTTGACCGGGATAAACCAAATTTTAGCTTTGAGCTATGATGATTTGTCTTTTCATCTTAAGTCATGTTTGTTGTATTTTGGAATATATCCTGAAGATTATGAAGTTAAATCAAGGAGACTAATTCGGCAGTGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACTTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTAATCCATAGAAGTTTGGTGCAAGTATCTTCTGTTAGATTTGATGGAAAAGCTAAAAGTTGTTGTGTTCATGATCTAACACGTGAGATGATTCTTGAAAAGTGTGAAGATTTAAGTTTCTGCAAGAATATCAGTGGAAATGGTCATTCATCTTTATCTGGAAGTATCCGGCGCCTATCAATAACAACCCATTCCGATGATTTTATGAAACGTATTGAAAACTCACGTGTTCGATCACTATTTCTTTTCGAATATGATTCACAACTTTTGAGCAAAGCTTTTATTAGGAGAATCTTTAGAGAATATAGGCGCTTGAAGGTGCTTGAGTTTGATGTTTTCTCTAATGTTAGATTGAGTAATATCCTTCGTGAAAATTTGGGAAGCTTGATTCACTTGAAGTATTTAAGCTTAAATAATGATTATCGTCTGAATTATGGATTTAAACTTCCCAAATCAATTTCCATGCTCCAAAACCTGGAGACTTTGGATCTGAGACAATGCGCATTATATGACCTACCAAAGGAGGTTAGCAAGCTTAGAAAGTTACAACATCTTATTGGCTCCAGAATGTCTTTGTTTAAATTGAAGGGTGGTATAGGAGGCATGGAATCCCTACAAACTCTGAGTAGTGTGGAAATTGAAGATGGTGATGATGGAATAAAGATAATTAAAGAGCTGGGACAGCTAAGGCAGTTAAGGAAATTGAGCTTGTTTCTTGGGAACGAAGACCATATAAGCACTTTATCTTCATTGAATGAGATGCAACATTTGGAGAATCTAAAGATTGGGACAAAAAACGTAAGAAACCGTAGTTATGATTTAACTGATTTGCATTTGAATCCACCTCCATCTAAGCTTCGAACTCTTAAACTAACAGGAATGTTGGAGAAGTTTCCAGAATGGATTCTTCAACTTCAAAATCTTGTTAAGTTGAAGTTAATATTGTCCCTCTTAAAAGATGATCCAATAAAGTTGTTAGAAAACATGCAAAACTTGTTGTCCCTTTCATTCATCGAATATGCTTATGAAGGTGAAAGTTTACATTTTCATGATGGAGGGTTTCAAAATCTAAAGGAACTATACATTAGTGACTTGCCTAACTTGAATTCAATTGTAATTGAAAAAGGAGCATTGCAATCTCTAAAAAAGTTCGAGTTATACAAGATCCCCAACCTCAAGACTGTTCCTGCTGGCATCCAACACTTAGAAAAACTTCAAGTTCTCAATGTTCAATATGTGCCACATGAAGAACTTTATGCTGAACTTTAA 2706 0.3666 MAEMAVSFVLEQLIPLLTEEAKLLGGIHKEFADIKDEFECIQAFLKDADKKAKRDDTTEGVKTWVKQVREAAFHIEDVIDDYLIQVRQEPRDPGFVALLHKIVHSLKVIIPRHQIASKIQGIKSSLRGIKKRSQTYGFQRSLEQGSRSFRGRKSAKWHDPRMDALYIDEAEMVGFEEPKNKLIEWLLEGRSERTVIAVVGMGGQGKTTLAKKVFDNKKVVGDFDYRVWITVSQSYYIEGLLRSMLNELYKQEGDTPPQDISQMDRESLISMLRNYLQQKRYVFVFDDVWNIHFWNEIQNACIDNKMGSKIFITTRNMEVATNCRKSSVVKVHDMQPLSEVQSFELFKKKAFQKKDIPNELKEISLKIANKCKGLPLAIVAIGGLLSTKEKSLLEWQKFCDKLPLELKRDSHLTGINQILALSYDDLSFHLKSCLLYFGIYPEDYEVKSRRLIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRSLVQVSSVRFDGKAKSCCVHDLTREMILEKCEDLSFCKNISGNGHSSLSGSIRRLSITTHSDDFMKRIENSRVRSLFLFEYDSQLLSKAFIRRIFREYRRLKVLEFDVFSNVRLSNILRENLGSLIHLKYLSLNNDYRLNYGFKLPKSISMLQNLETLDLRQCALYDLPKEVSKLRKLQHLIGSRMSLFKLKGGIGGMESLQTLSSVEIEDGDDGIKIIKELGQLRQLRKLSLFLGNEDHISTLSSLNEMQHLENLKIGTKNVRNRSYDLTDLHLNPPPSKLRTLKLTGMLEKFPEWILQLQNLVKLKLILSLLKDDPIKLLENMQNLLSLSFIEYAYEGESLHFHDGGFQNLKELYISDLPNLNSIVIEKGALQSLKKFELYKIPNLKTVPAGIQHLEKLQVLNVQYVPHEELYAEL* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3923 901 Gene3D - 4 116 - -
Tpr3g3923 901 PANTHER - 30 889 - -
Tpr3g3923 901 Gene3D Ribonuclease Inhibitor 565 694 IPR032675 -
Tpr3g3923 901 Gene3D - 162 332 IPR027417 -
Tpr3g3923 901 Gene3D - 429 513 IPR036388 -
Tpr3g3923 901 Gene3D Ribonuclease Inhibitor 696 898 IPR032675 -
Tpr3g3923 901 CDD RX-CC_like 2 131 IPR038005 -
Tpr3g3923 901 PANTHER DISEASE RESISTANCE PROTEIN RP 30 889 IPR044974 GO:0006952
Tpr3g3923 901 SUPERFAMILY L domain-like 502 893 - -
Tpr3g3923 901 PRINTS Disease resistance protein signature 195 210 - -
Tpr3g3923 901 PRINTS Disease resistance protein signature 275 289 - -
Tpr3g3923 901 PRINTS Disease resistance protein signature 371 385 - -
Tpr3g3923 901 PRINTS Disease resistance protein signature 633 649 - -
Tpr3g3923 901 Pfam Rx N-terminal domain 5 93 IPR041118 -
Tpr3g3923 901 Gene3D - 336 427 IPR042197 -
Tpr3g3923 901 Pfam NB-ARC domain 176 425 IPR002182 GO:0043531
Tpr3g3923 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3923 Tpr-Chr3 43728327 43731264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3923 195 390 WRKY Transcription Factor Family AT5G45050 28.571 8.76e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3923 K13457 - gmx:100819372 851.277