Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3922 ATGACTAAACTTGGCCCTCTTGAAGAGTCCCTTTTAAATGATGAAGCTAGTGTAAACAAGGATTCTGATGCCAAAAACACACTAAAAACCTGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGAGTCCACTAATAACTTTAGGCAGTAAAAAGACTTTGGACCATGAAGACCTTCCACTGCTTTCTACTAACGACAGTGCCTATGGAACTTTTTCAACTTTTAAAAAAAAGCTTGAGTTGGAGTGTGGTAATGTTAGGAATTTGACCACTATTAACCTCACCAAGGTTTTGTTCTTCTCAACTTGGCAAGGGATTCTTCTATCTGGCTTTTTTGCATTCTTGTTCGTATGTGCTTCTTATGTTGGACCCTACCTTATAGACAATTTTGTGCAATACCTCAATGATGAAAACAAATCTAAAAATGAAGGCTATGTTTTGGCTATGATGTTTGTTGCGGCAAATCTTGTCGACTCTCTTTTTCAGAAGCACTTTGTGTTTAAGATCCAACAGGTTGGTGTTCGGATGCAATCAATGTTGGTGTCAATGATCTATACTAAAGGTTTGACTATTTCGTGTCAATCGAAAGCGGAACACAGCAGCGGCGAAATCATCAACTTATTGACGGTTGATGCTGAAAGGATAGGTGAATTTTGTTGGTACATGCATGATATATGGATGGCTGTTCTTCAAGTTTCTTTGGCTTTGTTTATTCTTCATAGAAGTGTAGGGGTTGCTTCAGTAGCTACTTTTGCAGCCACCGTAGTTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAGAAGTTCCAAGGTAAGTTAATGGAATTCAAAGATAAAAGAATGAAGGCAACATCTGAGATTTTAATGAACATGAGGATTCTTAAACTTCAAACATGGGAGATGAAATTCTTATCAAAGATTATTCAGATTAGGAAGTTAGAGGAGATTTGGCTAAAGAAATTTCTTATTGGTTCAGCAATGGCTAAATTAATTTTCTTTAACGCCCCAACATTTATTGCTGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATTCCACTTGAATCAGGAAAGATCTTATCTGCACTTGCAACATTCAGAATTCTTCAACTGCCTATTTATAGTCTTCCCGACACAATTTCAGTGATTGCAGAAACCAAGGTTTCTGTAGATAGGATTGCTGCCTTTCTTCGTCTAGATGATTTGCAGGCCGATGTAGTGGAAAAGCTTCCTCGCAGTAGTTCTGATATAGCAATTGAAATTGAATATGGAAATTTCAGTTGGGATTTATCTTCTGTCAATACAACGTTGAAAAACATAAATCTTAGAGTTTCTCATGGAATGAGGGTTGCAGTTTGTGGTACTGTTGGATCAGGAAAGTCTAGTTTACTTACTTGTATAATAGGGGAAATGCCAAAGCTATCTGGAACCTTGAAGGTGTGTGGAACAAAGGCTTATGTTGCTCAATCACCATGGATACAGAGTGGGAAGATAGAAGAAAATATACTCTTTGGTATAGAAATGGATAGGGAAAAGTATGAGAGGGTACTAGAAGCATGTTCATTGAATAAAGACTTAGAGGTTTTACCATTCGGTGATCAGACCATTATTGGAGAAAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTGTACCAAGATGCTGATATATATCTGCTCGACGATCCCTTTAGTGCTGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTAACCTTCTGAAAACAAAAACTGTGATATACATAACACATCAAGTAGAGTTCTTGCCTGATGCTGATCTGATACTGGTCATGAAAGATGGAAGGATAACTCAATCAGGAAAATACAATGACCTACTTACGTCCGGAACAGAGTTTATGGAACTTGTAGGTGCACATAGAGCAGCATTGTCTTCAGTAAAGTCCTTAGAGAGAAGGAATACATTTAAAGAATCGAGTATTACTGGGGAAGACACAGGTTTATTAAGTGATTTTGAACTTGAGCAAGAAGTGGAAAACATAGATGATCGAAACGGCAAGTTAGATGACACAGTTGAACAGAAAGGCCAACTTGTTCAAGATGAAGAACGGGAAAAGGGTACAATTGGACTTAAAGTGTTCTGGACATACATCACAATAGCTTATGGAGGAGCTCTTGTACCTTTTATATTTCTTTCACAGATACTCACTGTGGTTTTACAGATCGCAAGCAATTATTGGATGGCATTGGCAACTCCTGTTTCAGCAACTGCAGAACCAAATATTGGAAGCCTTACTCTTATGGTTGTCTATGTTTCTTTATCAATTGGAAGTTCTTTTGCAACCCTTGCCAGAACAGTTCTTGCAATTATATCTGGATACAAGACTGCCACCTTGCTCTTCAATCAAATGCATTCCAGCTTTATTCGAGCACCAATGTCTTTTTTTGACTCCACGCCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAAGTGCAATAGATATGAGCATTTCAAGTCTAGCATGGGCATTTACCTACCGTGTAGTTCAGCTCTTTGGAAATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTGATTATAGTATTGATTCCTGTCGTGGCAGCCAGCATATGGTACCAGCGATACTACTCTGCATCAGCACGCGAATTGGCACGATTAACTGGTATATGCCAAGCTCCAGTTATTCAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAATTATACAGTGGTAGTGCAAAGGAATGGCTGAGTTTCAGATTGGATCTTTTATCCATTACAGTATTTGCGTCCTGCTTGGTTTTCTTGGTGTCTTTTCCAAGTTCAATAACTAATGCTAGTATTGCGGGATTGGCTGTGACATATGGGATTAACCTATGTGAAATACAATCCGATTTAATTCGGTTTTTTTGCAACTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACTTCCATCCCAAGTGAAGCACCTCTTATAATAAAAGAAAACCGACCAGATCATTCTTGGCCGTCATTCGGAGAGGTTCATATTCAGGATTTACAGGTTCAATATGCTCCTCACTTGCCTCTTGTTTTACGTGGACTAACATGCACTTTTACTGCTGGAGCAAAAACTGGAATTGTTGGAAGAACCGGAAGTGGAAAATCAACACTAGTGCAAACACTCTTCAGACTTGTTGAACCTGTTGCAGGACAAATATTGATAGATAAGATCAACATCTCATTGATTGGAATCCATGATTTAAGGTCAAGATTAAGCATAATTCCTCAGGATCCAACAATGTTTCAAGGGACAGTAAGAAGCAACCTAGACCCGCTTGAAGAGTACACAGACAAACAGATTTGGGAGGCTTTAGATAGGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTTGACTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAGTTGGTTTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTCGATGAAGCGACTGCATCAGTTGATACAGCTACAGATAATATAATTCAGCAGACTGTTAATCAACATTTCACTGATTGCACAGTTATTATCATTGCTCACAGAATAACTTCAATCCTCGATAGTGACATGGTTCTGTTTCTCAGCGAAGGGCTTATTGAAGAATATGATTCACCAAAGAAGCTGCTTAAAGATAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAACACTGGTTTTGGAAGTTGA 3906 0.3858 MTKLGPLEESLLNDEASVNKDSDAKNTLKTCYSNAGFFSILTFSWMSPLITLGSKKTLDHEDLPLLSTNDSAYGTFSTFKKKLELECGNVRNLTTINLTKVLFFSTWQGILLSGFFAFLFVCASYVGPYLIDNFVQYLNDENKSKNEGYVLAMMFVAANLVDSLFQKHFVFKIQQVGVRMQSMLVSMIYTKGLTISCQSKAEHSSGEIINLLTVDAERIGEFCWYMHDIWMAVLQVSLALFILHRSVGVASVATFAATVVVMLLNLPVASLQEKFQGKLMEFKDKRMKATSEILMNMRILKLQTWEMKFLSKIIQIRKLEEIWLKKFLIGSAMAKLIFFNAPTFIAVVTFGTCVLIGIPLESGKILSALATFRILQLPIYSLPDTISVIAETKVSVDRIAAFLRLDDLQADVVEKLPRSSSDIAIEIEYGNFSWDLSSVNTTLKNINLRVSHGMRVAVCGTVGSGKSSLLTCIIGEMPKLSGTLKVCGTKAYVAQSPWIQSGKIEENILFGIEMDREKYERVLEACSLNKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLNLLKTKTVIYITHQVEFLPDADLILVMKDGRITQSGKYNDLLTSGTEFMELVGAHRAALSSVKSLERRNTFKESSITGEDTGLLSDFELEQEVENIDDRNGKLDDTVEQKGQLVQDEEREKGTIGLKVFWTYITIAYGGALVPFIFLSQILTVVLQIASNYWMALATPVSATAEPNIGSLTLMVVYVSLSIGSSFATLARTVLAIISGYKTATLLFNQMHSSFIRAPMSFFDSTPSGRILNRASTDQSAIDMSISSLAWAFTYRVVQLFGNVAVMSQAAWQVIIVLIPVVAASIWYQRYYSASARELARLTGICQAPVIQHFSETISGSTTIRSFEQESRFNEMNMQLIDKYSQPKLYSGSAKEWLSFRLDLLSITVFASCLVFLVSFPSSITNASIAGLAVTYGINLCEIQSDLIRFFCNLENKIISVERILQYTSIPSEAPLIIKENRPDHSWPSFGEVHIQDLQVQYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLVEPVAGQILIDKINISLIGIHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDKQIWEALDRCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVNQHFTDCTVIIIAHRITSILDSDMVLFLSEGLIEEYDSPKKLLKDKSSSLAQLVAEYTRRSNTGFGS* 1302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3922 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 111 391 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3922 1301 CDD ABC_6TM_ABCC_D1 112 399 IPR044746 GO:0140359
Tpr3g3922 1301 Pfam ABC transporter transmembrane region 738 981 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3922 1301 Pfam ABC transporter transmembrane region 111 377 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3922 1301 CDD ABC_6TM_ABCC_D2 736 1030 IPR044726 GO:0140359
Tpr3g3922 1301 Gene3D - 403 670 IPR027417 -
Tpr3g3922 1301 Pfam ABC transporter 1073 1220 IPR003439 GO:0005524
Tpr3g3922 1301 Pfam ABC transporter 443 577 IPR003439 GO:0005524
Tpr3g3922 1301 Gene3D - 1038 1291 IPR027417 -
Tpr3g3922 1301 CDD ABCC_MRP_domain1 425 625 - -
Tpr3g3922 1301 ProSitePatterns ABC transporters family signature. 550 564 IPR017871 GO:0005524
Tpr3g3922 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 738 1018 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3922 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 647 IPR027417 -
Tpr3g3922 1301 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 6 1300 - -
Tpr3g3922 1301 SUPERFAMILY ABC transporter transmembrane region 107 403 IPR036640 GO:0005524|GO:0016021
Tpr3g3922 1301 Gene3D ABC transporter type 1, transmembrane domain 95 402 IPR036640 GO:0005524|GO:0016021
Tpr3g3922 1301 Gene3D ABC transporter type 1, transmembrane domain 699 1036 IPR036640 GO:0005524|GO:0016021
Tpr3g3922 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 427 648 IPR003439 GO:0005524
Tpr3g3922 1301 SMART AAA_5 452 625 IPR003593 -
Tpr3g3922 1301 SMART AAA_5 1081 1273 IPR003593 -
Tpr3g3922 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1055 1289 IPR003439 GO:0005524
Tpr3g3922 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1047 1280 IPR027417 -
Tpr3g3922 1301 SUPERFAMILY ABC transporter transmembrane region 736 1037 IPR036640 GO:0005524|GO:0016021
Tpr3g3922 1301 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 6 1300 - -
Tpr3g3922 1301 CDD ABCC_MRP_domain2 1053 1273 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr3g3922 Tpr-Chr3 43716415 43724726 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3922 425 669 Calmodulin-binding Proteins AT2G36910 29.502 3.38e-25 112
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0177 4 1945407 1952168 Tpr3g3922 3 43716415 43724726 PCT